| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961838
Identifier: 157961838
GI number: 157961838
Start: 2442728
End: 2443183
Strand: Direct
Name: 157961838
Synonym: Spea_2017
Alternate gene names: NA
Gene position: 2442728-2443183 (Clockwise)
Preceding gene: 157961837
Following gene: 157961839
Centisome position: 47.21
GC content: 38.82
Gene sequence:
>456_bases ATGAAAATAATTAAGAGGACAAGGGGGGTATACGCTGTTGAGTTTTCGATTGTAGCAAGTGTGTTTTTCCTTTTCTTATT TTCTTCTATAGAAGTTGGTAGGTTGCTATACACCTACAATGTGCTACATGAAGCTGCCCGACGTGCAGCTAGAATTGCTG TGGTATGCCAAGTCAACACGGATATACGCTCACAAGCACTCTTCAATGGGGCTAATTTAGTACCAAACCTAACTAACGAT AACTTGTTTATAACTTACTTACAATTAGATGGAAGTGCTGCTACAGATTTAGTGTATGGCAGTGATGTTCGCTTAATTAG AGCTGAAATACAAAACTATCAGCATCAATTCCTAGTACCTGGTCTTACACATACACTTAATTCTCCTGTTTTTTCAGCTA CATTGCCTAGAGAAAGTTTAGGCGTTTTTAAGGGAGGGACCTCTGATTGCAGTTAA
Upstream 100 bases:
>100_bases GGACACCAATCTTTTTCGATAAGCTTTCAGGTTTTGGCTTCAATAATGACGCTATTGATCTAGGCTTTAGCCTTAACTCG ACCTATGCAGTGAGGGCAAT
Downstream 100 bases:
>100_bases TTCATTTTCAATCAATAGGTAAATAATCAAATACCTTATGGATTGTTGTCTATAGTAAATATAGCTGCATTGGAAAAGGA AGTAAGGTGTGTAATGGATA
Product: TadE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKIIKRTRGVYAVEFSIVASVFFLFLFSSIEVGRLLYTYNVLHEAARRAARIAVVCQVNTDIRSQALFNGANLVPNLTND NLFITYLQLDGSAATDLVYGSDVRLIRAEIQNYQHQFLVPGLTHTLNSPVFSATLPRESLGVFKGGTSDCS
Sequences:
>Translated_151_residues MKIIKRTRGVYAVEFSIVASVFFLFLFSSIEVGRLLYTYNVLHEAARRAARIAVVCQVNTDIRSQALFNGANLVPNLTND NLFITYLQLDGSAATDLVYGSDVRLIRAEIQNYQHQFLVPGLTHTLNSPVFSATLPRESLGVFKGGTSDCS >Mature_151_residues MKIIKRTRGVYAVEFSIVASVFFLFLFSSIEVGRLLYTYNVLHEAARRAARIAVVCQVNTDIRSQALFNGANLVPNLTND NLFITYLQLDGSAATDLVYGSDVRLIRAEIQNYQHQFLVPGLTHTLNSPVFSATLPRESLGVFKGGTSDCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16720; Mature: 16720
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIKRTRGVYAVEFSIVASVFFLFLFSSIEVGRLLYTYNVLHEAARRAARIAVVCQVNT CCCHHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECC DIRSQALFNGANLVPNLTNDNLFITYLQLDGSAATDLVYGSDVRLIRAEIQNYQHQFLVP CHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEECC GLTHTLNSPVFSATLPRESLGVFKGGTSDCS CHHHHHCCCEEEEECCHHHCCEECCCCCCCC >Mature Secondary Structure MKIIKRTRGVYAVEFSIVASVFFLFLFSSIEVGRLLYTYNVLHEAARRAARIAVVCQVNT CCCHHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECC DIRSQALFNGANLVPNLTNDNLFITYLQLDGSAATDLVYGSDVRLIRAEIQNYQHQFLVP CHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEECC GLTHTLNSPVFSATLPRESLGVFKGGTSDCS CHHHHHCCCEEEEECCHHHCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA