Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961837

Identifier: 157961837

GI number: 157961837

Start: 2442249

End: 2442731

Strand: Direct

Name: 157961837

Synonym: Spea_2016

Alternate gene names: NA

Gene position: 2442249-2442731 (Clockwise)

Preceding gene: 157961836

Following gene: 157961838

Centisome position: 47.2

GC content: 38.51

Gene sequence:

>483_bases
ATGTTAAATTTATTAAGCAGTAACAAACAAAAAGGCCTTGCTGCAGTTGAGTTTACGCTGCTGGTTCCATTTTTTTTGTT
TCTGATATTTGCTGTAGCAGAGTTAGGTCGCGGGCTTTACCAATATAGTCAGCTGACCAGAATGATTCGAGATGCTGGTA
GGCACTTATCTCAATCCATAATAACAACAAGAAACGGAGTGCCGTCTGATTTAATTGATCAGAACTGTGACAACTGTATT
TCAGATACCTTAAATATCTTAATGTACGGCGCTAATACAGGCACTTCAAAGTTACTATCTGGGATTGAGATCACTGATAT
TTCAATTTCTGAGTTTCCGATTGATAGTGGGATCTTAGTGATCTCCGTTGACTATAATTGGACACCAATCTTTTTCGATA
AGCTTTCAGGTTTTGGCTTCAATAATGACGCTATTGATCTAGGCTTTAGCCTTAACTCGACCTATGCAGTGAGGGCAATA
TGA

Upstream 100 bases:

>100_bases
AATTCAGGACAATCATCACTAGACCCAGATTATGAAGGGGACAGTTCAACGATTGTTCTGTACTGGGATCCAGATAGCCC
GGATTCATGAGGAGAGAGCA

Downstream 100 bases:

>100_bases
AAATAATTAAGAGGACAAGGGGGGTATACGCTGTTGAGTTTTCGATTGTAGCAAGTGTGTTTTTCCTTTTCTTATTTTCT
TCTATAGAAGTTGGTAGGTT

Product: TadE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNLLSSNKQKGLAAVEFTLLVPFFLFLIFAVAELGRGLYQYSQLTRMIRDAGRHLSQSIITTRNGVPSDLIDQNCDNCI
SDTLNILMYGANTGTSKLLSGIEITDISISEFPIDSGILVISVDYNWTPIFFDKLSGFGFNNDAIDLGFSLNSTYAVRAI

Sequences:

>Translated_160_residues
MLNLLSSNKQKGLAAVEFTLLVPFFLFLIFAVAELGRGLYQYSQLTRMIRDAGRHLSQSIITTRNGVPSDLIDQNCDNCI
SDTLNILMYGANTGTSKLLSGIEITDISISEFPIDSGILVISVDYNWTPIFFDKLSGFGFNNDAIDLGFSLNSTYAVRAI
>Mature_160_residues
MLNLLSSNKQKGLAAVEFTLLVPFFLFLIFAVAELGRGLYQYSQLTRMIRDAGRHLSQSIITTRNGVPSDLIDQNCDNCI
SDTLNILMYGANTGTSKLLSGIEITDISISEFPIDSGILVISVDYNWTPIFFDKLSGFGFNNDAIDLGFSLNSTYAVRAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17615; Mature: 17615

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLLSSNKQKGLAAVEFTLLVPFFLFLIFAVAELGRGLYQYSQLTRMIRDAGRHLSQSI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTRNGVPSDLIDQNCDNCISDTLNILMYGANTGTSKLLSGIEITDISISEFPIDSGILV
HHHCCCCCHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHCCCEEEECCHHHCCCCCCEEE
ISVDYNWTPIFFDKLSGFGFNNDAIDLGFSLNSTYAVRAI
EEECCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MLNLLSSNKQKGLAAVEFTLLVPFFLFLIFAVAELGRGLYQYSQLTRMIRDAGRHLSQSI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTRNGVPSDLIDQNCDNCISDTLNILMYGANTGTSKLLSGIEITDISISEFPIDSGILV
HHHCCCCCHHHHHCCHHHHHHHHHHEEEECCCCCHHHHHCCCEEEECCHHHCCCCCCEEE
ISVDYNWTPIFFDKLSGFGFNNDAIDLGFSLNSTYAVRAI
EEECCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA