| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961839
Identifier: 157961839
GI number: 157961839
Start: 2443277
End: 2444503
Strand: Direct
Name: 157961839
Synonym: Spea_2018
Alternate gene names: NA
Gene position: 2443277-2444503 (Clockwise)
Preceding gene: 157961838
Following gene: 157961840
Centisome position: 47.22
GC content: 36.19
Gene sequence:
>1227_bases ATGGATAAACCCTTAGAGCTATGTGTCTCGAATAATGACCAACAAATACCTATGACTTATTGTTTACCTTTTCCTGTGCA AGCAGTTGTTGCAAGTAATGGAAGTCGAACGCTTACTTGGCTAACGGAAAGTTTGAACCAGTTTGAAAATTTAAAATGGC AGTCGTCAACTTATGAGGATGATCAATTAGCAAAAGAAAAAAATAGGTTTAATCTAGTGTTATTAGTCTTGCCTTCAGAT GAGTTGGAGGCTAAGAAAGCATTATCCTATGCGGCAAATTTTGACTGCGACATTATTTTAATCGGCTTTAATACGCCACA GAATATTCTAAGATTAGCATTTCAATATGATGTTAGTGATTTTATTCCTTCATCATCACCGTTACATGAATTTTTTACTT CTTTAGAGAAAGTTTCTGACCGACTCGTAAAGAATGCTGAGCTAGCTCCTGTGGTGGCTGTGATAAACGGCAAGGCTGGT TCTGGAGCAAGCTTTATATCCGCTAGTTTAGCCGACGTTGCCTCTCAAAGAGAAGGGAGCGATCTTGCACTCCTGGATAT GGACCTTCACCACGGCACTCTTTCACATATTCTTGGCTATGACGCTAAGTATTCAATTTGTGATGTGATTGAAACTATCG AAGATCTAGATGAGATCGCGTTAAAAAGCACCATGACTAAGAAAGGAAACCTTAGCCTACTTGCTGCTAAGCCCTTCGAA CTTCTTACTTTAGATCAAGATGTTGATTTTAGTCGTATTAATGAACTGATGTGGAAATACCGTCAGTTCTATAAGCAAGT TATTTTAGACTTCTCTAGAGGACCTGAAGATTGGAATTGTAATTTGTTATTGAGTGCGACAATTTTAGTTGTAACTCAAC AAAATATAATGCACTTACGTCAAACCAAAGACTTGATTAATCAATTGACGACAAGGATGGGGATTAATTCAAATCAGATA ACTTTGGTTGTAAATCGATATAACAAAAACTCGAATATAAAATTATCTGATATCGAAGAAGCAATTGGAATATCAAGCAT AAACACAGTCGTTAATGATTATAAGTTATCGAACGAGTGTGTAGATTTAGGGAAACCGATAACTCAAGTAGCAAAAAAGC ACAGAATAGTTACCGATGTACGCTCTTTAGCGGATAGGTTTTTACCGATTAATAATGAACAAAATAAAAAAAGTACAAGT TTTTGGAAGCGACTTTTAGGAAACTAA
Upstream 100 bases:
>100_bases CAGTTAATTCATTTTCAATCAATAGGTAAATAATCAAATACCTTATGGATTGTTGTCTATAGTAAATATAGCTGCATTGG AAAAGGAAGTAAGGTGTGTA
Downstream 100 bases:
>100_bases TATGGAAATTAGGCAAGAAAGTAATCGAATTCAAGATTTCCAGCCATTAACTCAAGATGAGCAGGATATTAAGGTTGCCC TATACGATAAGTTATTGAGC
Product: Flp pilus assembly protein ATPase CpaE-like protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Pilus Assembly Protein; Flp Pilus Assembly ATPase CpaE; Pilus Assembly Protein CpaE; Two-Component Response Regulator; Septum Site-Determining Protein; Response Regulator Receiver; CpaE2 Pilus Assembly Protein; TadE-Like; Flp Pilus Assembly Protein ATPase CpaE-Like
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MDKPLELCVSNNDQQIPMTYCLPFPVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLAKEKNRFNLVLLVLPSD ELEAKKALSYAANFDCDIILIGFNTPQNILRLAFQYDVSDFIPSSSPLHEFFTSLEKVSDRLVKNAELAPVVAVINGKAG SGASFISASLADVASQREGSDLALLDMDLHHGTLSHILGYDAKYSICDVIETIEDLDEIALKSTMTKKGNLSLLAAKPFE LLTLDQDVDFSRINELMWKYRQFYKQVILDFSRGPEDWNCNLLLSATILVVTQQNIMHLRQTKDLINQLTTRMGINSNQI TLVVNRYNKNSNIKLSDIEEAIGISSINTVVNDYKLSNECVDLGKPITQVAKKHRIVTDVRSLADRFLPINNEQNKKSTS FWKRLLGN
Sequences:
>Translated_408_residues MDKPLELCVSNNDQQIPMTYCLPFPVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLAKEKNRFNLVLLVLPSD ELEAKKALSYAANFDCDIILIGFNTPQNILRLAFQYDVSDFIPSSSPLHEFFTSLEKVSDRLVKNAELAPVVAVINGKAG SGASFISASLADVASQREGSDLALLDMDLHHGTLSHILGYDAKYSICDVIETIEDLDEIALKSTMTKKGNLSLLAAKPFE LLTLDQDVDFSRINELMWKYRQFYKQVILDFSRGPEDWNCNLLLSATILVVTQQNIMHLRQTKDLINQLTTRMGINSNQI TLVVNRYNKNSNIKLSDIEEAIGISSINTVVNDYKLSNECVDLGKPITQVAKKHRIVTDVRSLADRFLPINNEQNKKSTS FWKRLLGN >Mature_408_residues MDKPLELCVSNNDQQIPMTYCLPFPVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLAKEKNRFNLVLLVLPSD ELEAKKALSYAANFDCDIILIGFNTPQNILRLAFQYDVSDFIPSSSPLHEFFTSLEKVSDRLVKNAELAPVVAVINGKAG SGASFISASLADVASQREGSDLALLDMDLHHGTLSHILGYDAKYSICDVIETIEDLDEIALKSTMTKKGNLSLLAAKPFE LLTLDQDVDFSRINELMWKYRQFYKQVILDFSRGPEDWNCNLLLSATILVVTQQNIMHLRQTKDLINQLTTRMGINSNQI TLVVNRYNKNSNIKLSDIEEAIGISSINTVVNDYKLSNECVDLGKPITQVAKKHRIVTDVRSLADRFLPINNEQNKKSTS FWKRLLGN
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45933; Mature: 45933
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPLELCVSNNDQQIPMTYCLPFPVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYED CCCCCEEEECCCCCCCCEEEECCCCHHHHEECCCCEEHHHHHHHHHHHHCCCCCCCCCCH DQLAKEKNRFNLVLLVLPSDELEAKKALSYAANFDCDIILIGFNTPQNILRLAFQYDVSD HHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHH FIPSSSPLHEFFTSLEKVSDRLVKNAELAPVVAVINGKAGSGASFISASLADVASQREGS HCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC DLALLDMDLHHGTLSHILGYDAKYSICDVIETIEDLDEIALKSTMTKKGNLSLLAAKPFE CEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEE LLTLDQDVDFSRINELMWKYRQFYKQVILDFSRGPEDWNCNLLLSATILVVTQQNIMHLR EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEHHHHHHHH QTKDLINQLTTRMGINSNQITLVVNRYNKNSNIKLSDIEEAIGISSINTVVNDYKLSNEC HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEHHHHHHHHCHHHHHHHHHHHHCCHHH VDLGKPITQVAKKHRIVTDVRSLADRFLPINNEQNKKSTSFWKRLLGN HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDKPLELCVSNNDQQIPMTYCLPFPVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYED CCCCCEEEECCCCCCCCEEEECCCCHHHHEECCCCEEHHHHHHHHHHHHCCCCCCCCCCH DQLAKEKNRFNLVLLVLPSDELEAKKALSYAANFDCDIILIGFNTPQNILRLAFQYDVSD HHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHH FIPSSSPLHEFFTSLEKVSDRLVKNAELAPVVAVINGKAGSGASFISASLADVASQREGS HCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC DLALLDMDLHHGTLSHILGYDAKYSICDVIETIEDLDEIALKSTMTKKGNLSLLAAKPFE CEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEE LLTLDQDVDFSRINELMWKYRQFYKQVILDFSRGPEDWNCNLLLSATILVVTQQNIMHLR EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEHHHHHHHH QTKDLINQLTTRMGINSNQITLVVNRYNKNSNIKLSDIEEAIGISSINTVVNDYKLSNEC HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEHHHHHHHHCHHHHHHHHHHHHCCHHH VDLGKPITQVAKKHRIVTDVRSLADRFLPINNEQNKKSTSFWKRLLGN HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA