| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961789
Identifier: 157961789
GI number: 157961789
Start: 2391611
End: 2392723
Strand: Direct
Name: 157961789
Synonym: Spea_1966
Alternate gene names: NA
Gene position: 2391611-2392723 (Clockwise)
Preceding gene: 157961787
Following gene: 157961790
Centisome position: 46.22
GC content: 41.42
Gene sequence:
>1113_bases ATGTTGAAAATCACTTTACGTTTTTTTGTCATCTTTCCCTTTCTTGCGTGTCTATCGACATTTGTTAATGCAGCAGATGT TAACTCGCTTGATGAAAGTGCTGTATCTATCGAGTCCAGATCGACAGCCCTTAGAAGTCAAGGTATCAAACAAGCCTTTG AAGTTGTGATTATGAAAAACTCAGGAACTCAGGCTGCGTTGACTAATCCATTGATTCAAAAGCAGCTTCAAAATGCGAGT TCATTAATGACTCAGTATGGTTATTATGAAGATGATGGAGAGTTGTTTCTTAAAGTCAACTTTGACCATAAACGTATCAT TCGTCTACTTAGGGAAGCGGGTCTACCAGTTTGGGGCAAGCAGCGGCCGTTAACCTTAGTATGGTTAGTTATTAATGAAG ATGGAGGTAGACAAATATTGAATGATGGGTCGGCATCTTCTAGTCGAAAAACCTTCGATTCAGAGTCATTAAGCCGAGGA GTGCCTTTGTTGTTTCCTTTAATGGATCTAGATGATTCAATGAAGGTTGGGGTTAATGATGTTCGAGGCCGTTTTACTGA TAACGTTGCTAATGCCTCACTAAGATATCAGGCTAATTATTTCTTAATGGCGACTGTTGAGCCGCAAGGGGCTGTGTACC ACTACCAGATGGGTCTTTATCCTAGAGATAAAGACCCGCAAGCGCTGCAGATGACATCGCTGGTTAATATTAGCGGTGAG AGCGCTACGATAGATGATGCCGTTACGGCTATGATTGCCGCGGCGAGTGAATATTATGTTGGTCAGTACGCTATTGCAGA CTCTGGCGAGCGTAATACTACCAAGATTGCATTTGTTGATGTGATAGATATAAAGCAGCTTGTAGTGATTGAGCGCTATC TAGCACAGTTAAGTGCGATCAAATCAGCAAGTATTGCCAGTATTAAAGGTCAGACTGTTGAGTTTAATTTAGCACTATTT GGCAATGAATCCGATCTTCATCGGTTAATGTCTCTCGACCCTCAAGTTGGGACTGTAGAGTCAAATATTCAGCAAAACTT AGGTTATTCGCCTGTTGAACCGGTAGAAGCATCTCAGAAAGAGATACAGATCTATTATTGGAAAGGGCAATAG
Upstream 100 bases:
>100_bases TATGTCAAGTGGTTTTGCCGGGCCTATTGGTTTTTACTCGGCCAAAAGCATAAAAGATGTGATACAATTTTGCCTATTGA GTCGTCCTTGAATCTTAAAC
Downstream 100 bases:
>100_bases CTCCCAATCGAGAGGCACACATGCTACCATGTGTGCCTAATATAGAAATATAGCGCCATTGAGAAGTACCTGAGTGAAGT CAAACTCTCCTTTACAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLKITLRFFVIFPFLACLSTFVNAADVNSLDESAVSIESRSTALRSQGIKQAFEVVIMKNSGTQAALTNPLIQKQLQNAS SLMTQYGYYEDDGELFLKVNFDHKRIIRLLREAGLPVWGKQRPLTLVWLVINEDGGRQILNDGSASSSRKTFDSESLSRG VPLLFPLMDLDDSMKVGVNDVRGRFTDNVANASLRYQANYFLMATVEPQGAVYHYQMGLYPRDKDPQALQMTSLVNISGE SATIDDAVTAMIAAASEYYVGQYAIADSGERNTTKIAFVDVIDIKQLVVIERYLAQLSAIKSASIASIKGQTVEFNLALF GNESDLHRLMSLDPQVGTVESNIQQNLGYSPVEPVEASQKEIQIYYWKGQ
Sequences:
>Translated_370_residues MLKITLRFFVIFPFLACLSTFVNAADVNSLDESAVSIESRSTALRSQGIKQAFEVVIMKNSGTQAALTNPLIQKQLQNAS SLMTQYGYYEDDGELFLKVNFDHKRIIRLLREAGLPVWGKQRPLTLVWLVINEDGGRQILNDGSASSSRKTFDSESLSRG VPLLFPLMDLDDSMKVGVNDVRGRFTDNVANASLRYQANYFLMATVEPQGAVYHYQMGLYPRDKDPQALQMTSLVNISGE SATIDDAVTAMIAAASEYYVGQYAIADSGERNTTKIAFVDVIDIKQLVVIERYLAQLSAIKSASIASIKGQTVEFNLALF GNESDLHRLMSLDPQVGTVESNIQQNLGYSPVEPVEASQKEIQIYYWKGQ >Mature_370_residues MLKITLRFFVIFPFLACLSTFVNAADVNSLDESAVSIESRSTALRSQGIKQAFEVVIMKNSGTQAALTNPLIQKQLQNAS SLMTQYGYYEDDGELFLKVNFDHKRIIRLLREAGLPVWGKQRPLTLVWLVINEDGGRQILNDGSASSSRKTFDSESLSRG VPLLFPLMDLDDSMKVGVNDVRGRFTDNVANASLRYQANYFLMATVEPQGAVYHYQMGLYPRDKDPQALQMTSLVNISGE SATIDDAVTAMIAAASEYYVGQYAIADSGERNTTKIAFVDVIDIKQLVVIERYLAQLSAIKSASIASIKGQTVEFNLALF GNESDLHRLMSLDPQVGTVESNIQQNLGYSPVEPVEASQKEIQIYYWKGQ
Specific function: Unknown
COG id: COG3249
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41057; Mature: 41057
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKITLRFFVIFPFLACLSTFVNAADVNSLDESAVSIESRSTALRSQGIKQAFEVVIMKN CEEEEHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEC SGTQAALTNPLIQKQLQNASSLMTQYGYYEDDGELFLKVNFDHKRIIRLLREAGLPVWGK CCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCC QRPLTLVWLVINEDGGRQILNDGSASSSRKTFDSESLSRGVPLLFPLMDLDDSMKVGVND CCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHH VRGRFTDNVANASLRYQANYFLMATVEPQGAVYHYQMGLYPRDKDPQALQMTSLVNISGE HCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCC SATIDDAVTAMIAAASEYYVGQYAIADSGERNTTKIAFVDVIDIKQLVVIERYLAQLSAI CCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHH KSASIASIKGQTVEFNLALFGNESDLHRLMSLDPQVGTVESNIQQNLGYSPVEPVEASQK CCCCEEEECCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCC EIQIYYWKGQ EEEEEEEECC >Mature Secondary Structure MLKITLRFFVIFPFLACLSTFVNAADVNSLDESAVSIESRSTALRSQGIKQAFEVVIMKN CEEEEHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEC SGTQAALTNPLIQKQLQNASSLMTQYGYYEDDGELFLKVNFDHKRIIRLLREAGLPVWGK CCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCC QRPLTLVWLVINEDGGRQILNDGSASSSRKTFDSESLSRGVPLLFPLMDLDDSMKVGVND CCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHH VRGRFTDNVANASLRYQANYFLMATVEPQGAVYHYQMGLYPRDKDPQALQMTSLVNISGE HCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCC SATIDDAVTAMIAAASEYYVGQYAIADSGERNTTKIAFVDVIDIKQLVVIERYLAQLSAI CCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHH KSASIASIKGQTVEFNLALFGNESDLHRLMSLDPQVGTVESNIQQNLGYSPVEPVEASQK CCCCEEEECCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCC EIQIYYWKGQ EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA