| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961453
Identifier: 157961453
GI number: 157961453
Start: 1968625
End: 1970703
Strand: Direct
Name: 157961453
Synonym: Spea_1627
Alternate gene names: NA
Gene position: 1968625-1970703 (Clockwise)
Preceding gene: 157961452
Following gene: 157961454
Centisome position: 38.04
GC content: 47.86
Gene sequence:
>2079_bases ATGAGAAATCTATTTATCACCTCTGCTTGTGCCATCGCCATATTATCTGCCTGCTCCAATGACTCCCAATCAGTTGCTCA AGCCGAGCAAGAGCAACTCATAGCTGAACAGCTCAAGGCAGAGCAAGCTAAGGTGTATCTAAATGGCTTAGCCGATACCT TGACCGACCGCTGGCAGCAAACTGATGATGGTCTAGTGTGGAATGTGAAAGATAGCCATGAAGATCATATTGAAATGAGT GGCGAACAAACCTCTGCCATTATCTATTATGGCAGTGATGCCGATGGTGCTCTGACCCTGAGTCGTAAGCTCGTGTGGCC TATGCTACGCACCATCCCAAATGATACCCACGCTAGCCTTATTCATGATTTCCCACTCTCCGTTTCTCCTAGTATTGCCG TTAATGGTCTGGCGGTCGTTCAAGAGTTGTTAACCCAGGCAAGAATCGATGGCCGACTCTCACTTACCAGTCAAATTGCT GAAGGGGTTGAACTGATGCGCCTGTTATCGCCAAGCACCACGCAACCAGTGATGATTGAAGCATTAAGCTTTAAAAATAG CGGTGTCGATGATGTTGAGTTGGCGCTAGGGGAGTTAGATTATCAAATCGACACCCCTAAAGAGCAGGGGGTATACGGTA GCTATAAAATCCAGGCCACAAGCGACAGAGCTGGGATATTTAAATTAGCTCCGAATGAGGCCGTTACGGTTTATCTCGAG TTTAAAGCCACCAAAGCGGGACAAACTACCGAGTTTGATGCGGTCAAAGAGCTTGAGCTACGTAAAGACTATGTGGCGAG CCTGAATAATAATCTGCAGTTGGTCACACCCGATGAGAACATCAACAAGATGTTTGAATTTGCAAAAATTCGTAGTGCGG AATCGATCTTTAGAACTAAGGGCGGCTTGATGCATGCACCTGGTGGCGGACGCTATTACGCCGCTATTTGGGCTAACGAT CAGGCTGAATATATCAATCCCTTCTTTCCATTTTTAGGCAATGATGTGGGTAATGAGTCGGCAATCAACAGCTTTGAGCA TTTTGCCCGCTTCATGAATGATGAAGGCAAAGCCATTCCGTCTTCAATTATCGCCGAAGGGGATGATATTTGGAACGGCG CGGGCGATAGAGGCGACTGCGCCATGATAGCCTACGGCGCCAGCCGTTTCGCATTGGCTTACGGTGATGAGGAGCAGGCG AAAGCCTTGCTGCCTTTAATCGATTGGTGTATCGATTATAGTTACGCTAAGCAAACAGCAGACGGCGTGATTGCATCCGA CAGTGATGAACTCGAAGGGCGATTCCCCGCAGGTGACGTTAACTTAAGCACCAATATGTTGACCTACGGCGCTTTGGTGT CATCGAGTCATTTGAATAATGAGCTAGGGCGAACTGCACTTGCGGCAGATTATCAACAGCGTGCGGTTAAGCTTGCAACA GATATCGAGGGTTACTTTGGAGCCAATGTTCAAGGCTTCGATACTTACCAATACTATCAAGGCAATGACAAGCTAAGAGC CTGGATTGCGCTGCCATTCTCTTTCGGTGTTTTTGACCGCAAAGATCAGACCCTTGCAGCAGTTTTGTCTGAGCATTTAT GGAGTGCCGATGGGATCTACAGTGAAGCGGGCAACAAAACCTTTTGGGACAGAGCGACACTCTATGCGTTTAGAGGCATT TTTGCGGCTCAAGAGACGGATACCGCAATGCGCTACTTTAAGTACTACTCACGTAAGCGTCTACTTGGTGAGCACGTACC CTACGCGGTGGAAGCTTGGCCAGAAGGCGACCAACGCCATCTATCGGCTGAGAGTGCACTTTATGCCCGAGTGGTTACAG AAGGTATTTTTGGTATTGAGCCGACAGGCTTTAAACGCTTTGACGTTGCGCCATATTTGCCTACAGGCTGGGATAATATG TGCCTGAAGCATATTCGCGCGTTCGAGAGTAACTTTGATGTCTGTGTGAGTCGTGCTGAAGATGCCGATAAAGGTTTTAA TGTCACGATTGAGCAGAAGCAAGGTGAGTTGCAGCAGATCAATTGGGACGGGCAATCTCCTATCAGCGTTAGTCTATAA
Upstream 100 bases:
>100_bases CAGTTTCAATAAATATATTAGTTTTAATAACCTGTACCGCCCCGTCAGGATTATTGGCTAAGAAGCTGACTCGAATCACG TCAAAAATAACGAGAGATCT
Downstream 100 bases:
>100_bases AGGTACTATCAAGATTAGCCTATAAAGATGCTAAGCAGAGTAGGTTAAGTCGCAATGGCTTAACCTACTCGGTCTAAAGC TTTGACGCTTATCTTTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MRNLFITSACAIAILSACSNDSQSVAQAEQEQLIAEQLKAEQAKVYLNGLADTLTDRWQQTDDGLVWNVKDSHEDHIEMS GEQTSAIIYYGSDADGALTLSRKLVWPMLRTIPNDTHASLIHDFPLSVSPSIAVNGLAVVQELLTQARIDGRLSLTSQIA EGVELMRLLSPSTTQPVMIEALSFKNSGVDDVELALGELDYQIDTPKEQGVYGSYKIQATSDRAGIFKLAPNEAVTVYLE FKATKAGQTTEFDAVKELELRKDYVASLNNNLQLVTPDENINKMFEFAKIRSAESIFRTKGGLMHAPGGGRYYAAIWAND QAEYINPFFPFLGNDVGNESAINSFEHFARFMNDEGKAIPSSIIAEGDDIWNGAGDRGDCAMIAYGASRFALAYGDEEQA KALLPLIDWCIDYSYAKQTADGVIASDSDELEGRFPAGDVNLSTNMLTYGALVSSSHLNNELGRTALAADYQQRAVKLAT DIEGYFGANVQGFDTYQYYQGNDKLRAWIALPFSFGVFDRKDQTLAAVLSEHLWSADGIYSEAGNKTFWDRATLYAFRGI FAAQETDTAMRYFKYYSRKRLLGEHVPYAVEAWPEGDQRHLSAESALYARVVTEGIFGIEPTGFKRFDVAPYLPTGWDNM CLKHIRAFESNFDVCVSRAEDADKGFNVTIEQKQGELQQINWDGQSPISVSL
Sequences:
>Translated_692_residues MRNLFITSACAIAILSACSNDSQSVAQAEQEQLIAEQLKAEQAKVYLNGLADTLTDRWQQTDDGLVWNVKDSHEDHIEMS GEQTSAIIYYGSDADGALTLSRKLVWPMLRTIPNDTHASLIHDFPLSVSPSIAVNGLAVVQELLTQARIDGRLSLTSQIA EGVELMRLLSPSTTQPVMIEALSFKNSGVDDVELALGELDYQIDTPKEQGVYGSYKIQATSDRAGIFKLAPNEAVTVYLE FKATKAGQTTEFDAVKELELRKDYVASLNNNLQLVTPDENINKMFEFAKIRSAESIFRTKGGLMHAPGGGRYYAAIWAND QAEYINPFFPFLGNDVGNESAINSFEHFARFMNDEGKAIPSSIIAEGDDIWNGAGDRGDCAMIAYGASRFALAYGDEEQA KALLPLIDWCIDYSYAKQTADGVIASDSDELEGRFPAGDVNLSTNMLTYGALVSSSHLNNELGRTALAADYQQRAVKLAT DIEGYFGANVQGFDTYQYYQGNDKLRAWIALPFSFGVFDRKDQTLAAVLSEHLWSADGIYSEAGNKTFWDRATLYAFRGI FAAQETDTAMRYFKYYSRKRLLGEHVPYAVEAWPEGDQRHLSAESALYARVVTEGIFGIEPTGFKRFDVAPYLPTGWDNM CLKHIRAFESNFDVCVSRAEDADKGFNVTIEQKQGELQQINWDGQSPISVSL >Mature_692_residues MRNLFITSACAIAILSACSNDSQSVAQAEQEQLIAEQLKAEQAKVYLNGLADTLTDRWQQTDDGLVWNVKDSHEDHIEMS GEQTSAIIYYGSDADGALTLSRKLVWPMLRTIPNDTHASLIHDFPLSVSPSIAVNGLAVVQELLTQARIDGRLSLTSQIA EGVELMRLLSPSTTQPVMIEALSFKNSGVDDVELALGELDYQIDTPKEQGVYGSYKIQATSDRAGIFKLAPNEAVTVYLE FKATKAGQTTEFDAVKELELRKDYVASLNNNLQLVTPDENINKMFEFAKIRSAESIFRTKGGLMHAPGGGRYYAAIWAND QAEYINPFFPFLGNDVGNESAINSFEHFARFMNDEGKAIPSSIIAEGDDIWNGAGDRGDCAMIAYGASRFALAYGDEEQA KALLPLIDWCIDYSYAKQTADGVIASDSDELEGRFPAGDVNLSTNMLTYGALVSSSHLNNELGRTALAADYQQRAVKLAT DIEGYFGANVQGFDTYQYYQGNDKLRAWIALPFSFGVFDRKDQTLAAVLSEHLWSADGIYSEAGNKTFWDRATLYAFRGI FAAQETDTAMRYFKYYSRKRLLGEHVPYAVEAWPEGDQRHLSAESALYARVVTEGIFGIEPTGFKRFDVAPYLPTGWDNM CLKHIRAFESNFDVCVSRAEDADKGFNVTIEQKQGELQQINWDGQSPISVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76595; Mature: 76595
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLFITSACAIAILSACSNDSQSVAQAEQEQLIAEQLKAEQAKVYLNGLADTLTDRWQQ CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDDGLVWNVKDSHEDHIEMSGEQTSAIIYYGSDADGALTLSRKLVWPMLRTIPNDTHASL CCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCHHHH IHDFPLSVSPSIAVNGLAVVQELLTQARIDGRLSLTSQIAEGVELMRLLSPSTTQPVMIE HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE ALSFKNSGVDDVELALGELDYQIDTPKEQGVYGSYKIQATSDRAGIFKLAPNEAVTVYLE EEECCCCCCCHHHHHHHHCCEEECCCHHCCCCEEEEEEECCCCCCEEEECCCCEEEEEEE FKATKAGQTTEFDAVKELELRKDYVASLNNNLQLVTPDENINKMFEFAKIRSAESIFRTK EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC GGLMHAPGGGRYYAAIWANDQAEYINPFFPFLGNDVGNESAINSFEHFARFMNDEGKAIP CCEEECCCCCEEEEEEEECCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC SSIIAEGDDIWNGAGDRGDCAMIAYGASRFALAYGDEEQAKALLPLIDWCIDYSYAKQTA HHHHCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHCC DGVIASDSDELEGRFPAGDVNLSTNMLTYGALVSSSHLNNELGRTALAADYQQRAVKLAT CCEEECCCHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIEGYFGANVQGFDTYQYYQGNDKLRAWIALPFSFGVFDRKDQTLAAVLSEHLWSADGIY HCCHHHCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCH SEAGNKTFWDRATLYAFRGIFAAQETDTAMRYFKYYSRKRLLGEHVPYAVEAWPEGDQRH HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH LSAESALYARVVTEGIFGIEPTGFKRFDVAPYLPTGWDNMCLKHIRAFESNFDVCVSRAE HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHEEECCC DADKGFNVTIEQKQGELQQINWDGQSPISVSL CCCCCCEEEEECCCCCEEEECCCCCCCEEECC >Mature Secondary Structure MRNLFITSACAIAILSACSNDSQSVAQAEQEQLIAEQLKAEQAKVYLNGLADTLTDRWQQ CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDDGLVWNVKDSHEDHIEMSGEQTSAIIYYGSDADGALTLSRKLVWPMLRTIPNDTHASL CCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCHHHH IHDFPLSVSPSIAVNGLAVVQELLTQARIDGRLSLTSQIAEGVELMRLLSPSTTQPVMIE HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE ALSFKNSGVDDVELALGELDYQIDTPKEQGVYGSYKIQATSDRAGIFKLAPNEAVTVYLE EEECCCCCCCHHHHHHHHCCEEECCCHHCCCCEEEEEEECCCCCCEEEECCCCEEEEEEE FKATKAGQTTEFDAVKELELRKDYVASLNNNLQLVTPDENINKMFEFAKIRSAESIFRTK EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC GGLMHAPGGGRYYAAIWANDQAEYINPFFPFLGNDVGNESAINSFEHFARFMNDEGKAIP CCEEECCCCCEEEEEEEECCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC SSIIAEGDDIWNGAGDRGDCAMIAYGASRFALAYGDEEQAKALLPLIDWCIDYSYAKQTA HHHHCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHCC DGVIASDSDELEGRFPAGDVNLSTNMLTYGALVSSSHLNNELGRTALAADYQQRAVKLAT CCEEECCCHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIEGYFGANVQGFDTYQYYQGNDKLRAWIALPFSFGVFDRKDQTLAAVLSEHLWSADGIY HCCHHHCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCH SEAGNKTFWDRATLYAFRGIFAAQETDTAMRYFKYYSRKRLLGEHVPYAVEAWPEGDQRH HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH LSAESALYARVVTEGIFGIEPTGFKRFDVAPYLPTGWDNMCLKHIRAFESNFDVCVSRAE HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHEEECCC DADKGFNVTIEQKQGELQQINWDGQSPISVSL CCCCCCEEEEECCCCCEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA