| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961454
Identifier: 157961454
GI number: 157961454
Start: 1970873
End: 1972909
Strand: Direct
Name: 157961454
Synonym: Spea_1628
Alternate gene names: NA
Gene position: 1970873-1972909 (Clockwise)
Preceding gene: 157961453
Following gene: 157961457
Centisome position: 38.09
GC content: 46.93
Gene sequence:
>2037_bases ATGAATACCCAACTCCTTAAATTATCGGCACAATTGTGCTCCATTATCTGTTTGGCCCTTGTGCTGTGTGTGCCGGCTCA TGCGGCTAATCTGGCTGATATAGCAGATAAGACGGCGCCATACACCTTAGCCTCACCTAATGGGCAGTTACAGTTAAGTG TCACTAGAACGGCCGCTCAAGGCGTCAATTACTCGCTGCGCGTGTCAGGTAAACAGGTTTTACAAGATGCGGTAGCCGAC ATCACGCTTCAAGGCATGAAAACGAGTCTGACAAAGGCAAAACTTATCGATATTACTCGCCAGAGTATTGATCGAGAATT AGAGCCCCATGTGCAGCAAAAGTCAGAGCGAATTCGTGAGCACTATAACCAGCTAACATTACGCTTTGATAATAAACTGA CTCTGGCTTTTCGACTCTTCGATCAAGGTTTAGCCTATCGCTTTATCACTGAGCAAAGCGGAGAGTTAGTGGTAGAAGCT GAAACCGTGGCGGTAAATTTTGCTGGCGATCACTCGGTGTTGTTTCCAGAGGAAACCAGCTTTATTAGCCATAATGAACG GCTCTATTTGCCTAAGAAGCTTTCCGAGATCAGCTCGAAGCAGTTTGCTAGCTTGCCACTATTAGTCGATGTGGATGGTA TTAAGCTGGTTATTACCGAAACGGGGCTAAGGGACTATCCAGGGCTTTGGCTTGAGGGCAGTGACAAGCAGGGCTTTAAT GCCCGCTTCCCAGCGGTTGTGCTGGGCAGTGAGCTTAAACAAGATTCTGACAGAAACGAGAATATCCTCAAACGTGCAGA CTTTATCGCTCAGAGGCAGGCGATAGACGTCGCATCGCAATCGGGTCAGTTTCCATGGCGCGTGTTTGCCATTGCTCAAA ATGATGCAGAGTTACTCACTAATGAGCTGTCTTATTTGTTGGCCGATGAGCTGGCTATCGATGCGTCTTGGGTAAAACCT GGGCAAGTGGCGTGGGATTGGTGGAACGCTAATAATGTGTTTGGAGTCGACTTTGAGGCCGGCATTAATACGCAAACCTA TAAGTACTATATCGACTTTGCGGCTAAATACGGTATCGAATACATAGTATTAGATGAGGGCTGGCACCATTTAGACAGTG TGCTTAATGTTGTCGATGACATCGATGTGCAAGAGATTATTGCCTACGGCAAGAGTAAGAATGTCGACGTGATCCTCTGG GTGATCTGGAAGACACTCGATAATGAGCGAGAGCAAGCCTTAGCGCAATTCGAAGCCTGGGGCGCCGCGGGGATAAAGGT CGACTTTATGCAAAGAGACGATCAAGCAATGGTTAACTATTACTGGAAGATCGCCGAGCAAGCGGCTAAGCACAAGCTGC TGGTGGATTTTCATGGCTCATATAAGCCTGCAGGCCTGCGACGCGCTTATCCTAACGTGATCACTCGAGAAGGCGTGCGT GGCCTTGAGCACAATAAATGGGCAGATTACATCACTGCAGAGCATAACTTAACGCTACCGTTTATTCGCCAGTTAGCAGG CCCAATGGATTATACCCCTGGCGCTATGGTTAACGCTCAGCCTGAAAACTTTAAGATTAACTTCAATCGTCCTATGAGCA AGACGACAAGAGTACATCAATTAGCCATGTATCTGGTGTTTGAAAGTCCATTGCAGATGCTTGCCGATACGCCATCACAC TATCTTCGCGAGCATGAAAGCACCGAATTTATCACGAGTGTGCCAACGGTTTGGGATGAAACTCTAGTGTTATCGGCCAA AATTGGTGACCACATTATTATTGCGAGGCGCTCCGCTGACAAATGGTTTATTGGCGTGATGGGCAATTCACAAGCTCGTG AGTTTACGCTTGATTTGAGTTTTCTTGCTGATAGCGCAAGTCAGGTATATCAAATGAATAGTTTTGCCGATGGCCTTAAT GCCGATAAATATGCCAGTGACTATCTGAGTAAAAGTGAGCAGGTGACAGCTAAGGATAAAGTAAAGATAACCCTTGCACC AAGTGGTGGTTGGGTAGCGAGCTTAACGCCACAGTAA
Upstream 100 bases:
>100_bases CGGTCTAAAGCTTTGACGCTTATCTTTGACACTGACCTTCGATACTCTCCTTTAATACTTACCTTAGATGTATTGACTCA TGCTTACTTAAGAGAAGCCT
Downstream 100 bases:
>100_bases CAGTAATAGTGACAGTAATAGTAACAGAAAAGAACTGAAGCTTTAGAACCATAACAAAAAGGGAAGCCTTAGCTGTGTTC ACAGTCTAGGCTTCCCTTTT
Product: putative alpha-glucosidase
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MNTQLLKLSAQLCSIICLALVLCVPAHAANLADIADKTAPYTLASPNGQLQLSVTRTAAQGVNYSLRVSGKQVLQDAVAD ITLQGMKTSLTKAKLIDITRQSIDRELEPHVQQKSERIREHYNQLTLRFDNKLTLAFRLFDQGLAYRFITEQSGELVVEA ETVAVNFAGDHSVLFPEETSFISHNERLYLPKKLSEISSKQFASLPLLVDVDGIKLVITETGLRDYPGLWLEGSDKQGFN ARFPAVVLGSELKQDSDRNENILKRADFIAQRQAIDVASQSGQFPWRVFAIAQNDAELLTNELSYLLADELAIDASWVKP GQVAWDWWNANNVFGVDFEAGINTQTYKYYIDFAAKYGIEYIVLDEGWHHLDSVLNVVDDIDVQEIIAYGKSKNVDVILW VIWKTLDNEREQALAQFEAWGAAGIKVDFMQRDDQAMVNYYWKIAEQAAKHKLLVDFHGSYKPAGLRRAYPNVITREGVR GLEHNKWADYITAEHNLTLPFIRQLAGPMDYTPGAMVNAQPENFKINFNRPMSKTTRVHQLAMYLVFESPLQMLADTPSH YLREHESTEFITSVPTVWDETLVLSAKIGDHIIIARRSADKWFIGVMGNSQAREFTLDLSFLADSASQVYQMNSFADGLN ADKYASDYLSKSEQVTAKDKVKITLAPSGGWVASLTPQ
Sequences:
>Translated_678_residues MNTQLLKLSAQLCSIICLALVLCVPAHAANLADIADKTAPYTLASPNGQLQLSVTRTAAQGVNYSLRVSGKQVLQDAVAD ITLQGMKTSLTKAKLIDITRQSIDRELEPHVQQKSERIREHYNQLTLRFDNKLTLAFRLFDQGLAYRFITEQSGELVVEA ETVAVNFAGDHSVLFPEETSFISHNERLYLPKKLSEISSKQFASLPLLVDVDGIKLVITETGLRDYPGLWLEGSDKQGFN ARFPAVVLGSELKQDSDRNENILKRADFIAQRQAIDVASQSGQFPWRVFAIAQNDAELLTNELSYLLADELAIDASWVKP GQVAWDWWNANNVFGVDFEAGINTQTYKYYIDFAAKYGIEYIVLDEGWHHLDSVLNVVDDIDVQEIIAYGKSKNVDVILW VIWKTLDNEREQALAQFEAWGAAGIKVDFMQRDDQAMVNYYWKIAEQAAKHKLLVDFHGSYKPAGLRRAYPNVITREGVR GLEHNKWADYITAEHNLTLPFIRQLAGPMDYTPGAMVNAQPENFKINFNRPMSKTTRVHQLAMYLVFESPLQMLADTPSH YLREHESTEFITSVPTVWDETLVLSAKIGDHIIIARRSADKWFIGVMGNSQAREFTLDLSFLADSASQVYQMNSFADGLN ADKYASDYLSKSEQVTAKDKVKITLAPSGGWVASLTPQ >Mature_678_residues MNTQLLKLSAQLCSIICLALVLCVPAHAANLADIADKTAPYTLASPNGQLQLSVTRTAAQGVNYSLRVSGKQVLQDAVAD ITLQGMKTSLTKAKLIDITRQSIDRELEPHVQQKSERIREHYNQLTLRFDNKLTLAFRLFDQGLAYRFITEQSGELVVEA ETVAVNFAGDHSVLFPEETSFISHNERLYLPKKLSEISSKQFASLPLLVDVDGIKLVITETGLRDYPGLWLEGSDKQGFN ARFPAVVLGSELKQDSDRNENILKRADFIAQRQAIDVASQSGQFPWRVFAIAQNDAELLTNELSYLLADELAIDASWVKP GQVAWDWWNANNVFGVDFEAGINTQTYKYYIDFAAKYGIEYIVLDEGWHHLDSVLNVVDDIDVQEIIAYGKSKNVDVILW VIWKTLDNEREQALAQFEAWGAAGIKVDFMQRDDQAMVNYYWKIAEQAAKHKLLVDFHGSYKPAGLRRAYPNVITREGVR GLEHNKWADYITAEHNLTLPFIRQLAGPMDYTPGAMVNAQPENFKINFNRPMSKTTRVHQLAMYLVFESPLQMLADTPSH YLREHESTEFITSVPTVWDETLVLSAKIGDHIIIARRSADKWFIGVMGNSQAREFTLDLSFLADSASQVYQMNSFADGLN ADKYASDYLSKSEQVTAKDKVKITLAPSGGWVASLTPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76233; Mature: 76233
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQLLKLSAQLCSIICLALVLCVPAHAANLADIADKTAPYTLASPNGQLQLSVTRTAAQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCEEEEEEEEHHHC GVNYSLRVSGKQVLQDAVADITLQGMKTSLTKAKLIDITRQSIDRELEPHVQQKSERIRE CCCEEEEECHHHHHHHHHHHEEHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HYNQLTLRFDNKLTLAFRLFDQGLAYRFITEQSGELVVEAETVAVNFAGDHSVLFPEETS HHCEEEEEECCEEEEEEEEHHCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEECCCCCC FISHNERLYLPKKLSEISSKQFASLPLLVDVDGIKLVITETGLRDYPGLWLEGSDKQGFN CCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCC ARFPAVVLGSELKQDSDRNENILKRADFIAQRQAIDVASQSGQFPWRVFAIAQNDAELLT CCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHH NELSYLLADELAIDASWVKPGQVAWDWWNANNVFGVDFEAGINTQTYKYYIDFAAKYGIE HHHHHHHHHHHEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEEHHCCEE YIVLDEGWHHLDSVLNVVDDIDVQEIIAYGKSKNVDVILWVIWKTLDNEREQALAQFEAW EEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHHC GAAGIKVDFMQRDDQAMVNYYWKIAEQAAKHKLLVDFHGSYKPAGLRRAYPNVITREGVR CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCHHHHHCCC GLEHNKWADYITAEHNLTLPFIRQLAGPMDYTPGAMVNAQPENFKINFNRPMSKTTRVHQ CCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHH LAMYLVFESPLQMLADTPSHYLREHESTEFITSVPTVWDETLVLSAKIGDHIIIARRSAD HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCEEEEEEECCC KWFIGVMGNSQAREFTLDLSFLADSASQVYQMNSFADGLNADKYASDYLSKSEQVTAKDK CEEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCE VKITLAPSGGWVASLTPQ EEEEEECCCCEEEECCCC >Mature Secondary Structure MNTQLLKLSAQLCSIICLALVLCVPAHAANLADIADKTAPYTLASPNGQLQLSVTRTAAQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCEEEEEEEEHHHC GVNYSLRVSGKQVLQDAVADITLQGMKTSLTKAKLIDITRQSIDRELEPHVQQKSERIRE CCCEEEEECHHHHHHHHHHHEEHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HYNQLTLRFDNKLTLAFRLFDQGLAYRFITEQSGELVVEAETVAVNFAGDHSVLFPEETS HHCEEEEEECCEEEEEEEEHHCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEECCCCCC FISHNERLYLPKKLSEISSKQFASLPLLVDVDGIKLVITETGLRDYPGLWLEGSDKQGFN CCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCC ARFPAVVLGSELKQDSDRNENILKRADFIAQRQAIDVASQSGQFPWRVFAIAQNDAELLT CCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHH NELSYLLADELAIDASWVKPGQVAWDWWNANNVFGVDFEAGINTQTYKYYIDFAAKYGIE HHHHHHHHHHHEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEEHHCCEE YIVLDEGWHHLDSVLNVVDDIDVQEIIAYGKSKNVDVILWVIWKTLDNEREQALAQFEAW EEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHHC GAAGIKVDFMQRDDQAMVNYYWKIAEQAAKHKLLVDFHGSYKPAGLRRAYPNVITREGVR CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCHHHHHCCC GLEHNKWADYITAEHNLTLPFIRQLAGPMDYTPGAMVNAQPENFKINFNRPMSKTTRVHQ CCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHH LAMYLVFESPLQMLADTPSHYLREHESTEFITSVPTVWDETLVLSAKIGDHIIIARRSAD HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCEEEEEEECCC KWFIGVMGNSQAREFTLDLSFLADSASQVYQMNSFADGLNADKYASDYLSKSEQVTAKDK CEEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCE VKITLAPSGGWVASLTPQ EEEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA