Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961442

Identifier: 157961442

GI number: 157961442

Start: 1955564

End: 1958437

Strand: Direct

Name: 157961442

Synonym: Spea_1616

Alternate gene names: NA

Gene position: 1955564-1958437 (Clockwise)

Preceding gene: 157961439

Following gene: 157961443

Centisome position: 37.79

GC content: 47.01

Gene sequence:

>2874_bases
ATGAACTTTCGCACATCGCATCTTGTCGGCTTAATAGCCACGGGGTTAGTGGCTATTGCTGCCCCTTCGATTAACCCGGT
TGCTGCTGAGCCATTAAAAATTACAGGGCCAGATGGCCAAGTAAGACTCAATGAGCAGAATAGTCAAAGCATTCGTCAAT
ACGGTCCGACAACCTCGGCAGATACTTTCTGGAGTATTGCGCAGGCCGTAAAGCCTGATAATAGTGTCACCGTTTACCAA
GTGATGACGGCACTATATGACGCCAATCCCCACGCATTTTCAAGTAAAAACTATAACAGCCTAGAACGCGGCATGATTTT
GTTGGTGCCGACTAAAGCTGTAATGCAGCAGACCTCTCAAATTGACGCCAAAGCACGCGCCGAGCGTAACGATCGTAACT
GGTCAACAGCTGTCGCTAAATCGAGTGTGGCTCCTAAAACCGTCGTTCAAAAAACTGTGCCTCCAGAGGCTGTTGCTGCA
AAGATTGAAGCGCAAAAAGTGACAGTTGCTAAACCCTCCGTTGGCGTAAAGTCAAATCCAGTGATTGCAGAGTTATCGGC
AGAAGTTGATGCCCTAACTAAACAGATGGAAGAGATCCAAGCACTAAACCTCGAGCTAACTGATGAGCTTGCAAGGGCAA
GCGATGAAATAGTGGTTGGCTCAACGGATACCGAGGCGTTTCAGCAACAAATCACCCAGCTTAAAGAAGAAAATGCGCTG
CTAAAGCAGGCACTACAAGATACTAAATCTGAGAATGAAGCTTTAAATCAACAATTACAGCTTAAGCAGCAACAGCTTGC
CGCATCAAGTGCACCTGAGCAGGAGCCAACGTCGGATCTTTGGCGAACCTTAATGGATAACCCATTGCTATTGATGCTTG
GTGCGGCATTACCCGCTTTAATCGTAGTGGCGCTGTTTTGGTTGTTTATTCGCCGCAGAAGTGATGCGAATTCTGAGCAG
CAGGAGAGTGGAGGCGCTGCTGAGAACGAACTAAGTGGCATGAAAGATGACACTGCCATCGAAGATAAGTCTGACGATGC
CGACGGATTAGCGGTTCATTTAGATACTGACGACGCTGCAGTGCAGGCTCCATTGCAGGAGCTTGCGGTCGTAGGTGCTG
TAACTCAGGCAGAGCAAGAAGAGCAAGATATTGTTGTTGAAGACTCTCATGATGAAGGCCAGTCATTAGACGATCTGTGG
GCCGAGGCGATGGGTGAGCAAGAGCAAGATGGAGCCAATGATTTTGATGCGTTTCAAAAGCAATCTAAGTCGCCAGAAGA
AGAGGACTTGGACTCATTGCTTGCAGGTTTCGATGAACCTGCAGAGCAAGCTGACGAAGACCTATCTCTGAATGAGAAGC
CTTTTGTTGCTGAAGACGATGATTTAGATGCACTGTTAGCAGGGTTCGATGAACCGGCAGAGCAAGCTGACGATAATGAG
CAGTCTTTTGTTGCTCAAGGTGTTGCTCAGGGCAGTAGTCAAGAAAGCGCTCAAGACGATACTCAAAATGACGATTTAGA
TGCGTTGCTAGCAAGCTTCGATGAACCTGCAGAGCAGGCTGTTGGCACTCAAGAAGATGATATCGATGCTTTGCTTGCCG
ATTTTGATTCTGAAAATCAGCAGCTAGAGGAGGCTCATGAGCCAGAAGTTAAGGTCGCCGAGGATGACTTAGATGCGTTG
TTAGCAGAGCTTGATGATAAACCTCATGACGAATACAACGCCGACGCGCTTTCAGATGAGATGGCCGCCGAACTCGAGCT
TGGTTTCGAGATAGCTGCAGAGCTTGATTTATCAGAGGATGACGCACAGCAAGCTAAGCCTGATAGTGAGCTAGACAGTG
AACTTGATGCGCTGCTTGCAGAGTTTGACTCTCCGGCAGATGTTAGTGATATCGAGCAGGAACAAGAGCTACAACAGGCT
AGTGAAACTGAGCTTGCTATAACTGAGCCTGCAATTGATGAGACGCCAGTTGAGATAAAAGAGGCGTCAGCGGCAATCAC
TAAGGATTCAAGTAGCTTAGATTTCGACTTGAGTGATTTTGAGCCAAGTAGCCTGACAGCAAATACTGATAGCCGTGATG
CTGAGCCTAGCAATAATCACGATGAGGAGTTGCTAGAGTTTACTCTGCCAGAACCAGAACCAGAACCAGAACCAGAACCA
GAACCAGAACTATCTTCGGAGTTAGATCCTCAAGTAATCGAAAAGACCGATAAAGAGAGTGGTTTCTTCGATGATCTTAA
AGGCAATAAGAAAACTGAGGAAAACAGTTTAGATTGGGAAAGTATTGCCGCTCAGAGTGGTAATGATGATCCAGCTGAAC
TTGGCGCAGAATTAGCTTTTGCAGCAACTGAAAAAGTTGAAGTGTCTGATGATGAGCTGTTAAGCGGGTTAGTCTCGAAA
GGTGCAGCGCAAGATACAGCGCTTGAGCTTGACGCCGATGAGACATTCTCACTCGACGATGATAGTAAGATGACCGTTGA
CGAGGCGCTAGCCGCTCTGGATGCTGAAGAATTAGGTGCCAAAGAACTGAGCAAGAGCGCGGTTGCTATGCACGACTTAA
CTAGCTTCCAGAAAGATAATGGCTTTATTGATATCGATAGATTGTTGAGCGAAGCCGATGAAGATAGCGGCGAAATCGAT
CTTTATAAGGAACTTGATGTCGACATGGGCGAGTTAGATTCGCTAAAGGGCAGTACTCCTATGGTCGATGTCGATGATGA
AGAAAACTCGGTTAACGCTAAGTTGGATTTAGCCCGCGCCTATATTGAGATCGATGACAGTGACAGTGCGCGAGCACTAC
TAAAAGAGGTCGAACTCGATGGTAATGATCGCCAACAGGCCGAAGCCTTAGGTTTACTCAAAGAGTTAGTGTAA

Upstream 100 bases:

>100_bases
CAGGGCAACAGAATCTAGTTTATAGTAATCTCAATAAATACAATTGCCTAAAGCTCGTCACCAGGGTGGTGACTCCAGAG
TGCTTTAAAGGGAAGGATTG

Downstream 100 bases:

>100_bases
ATTCCTCAACTAAAATCGGCGCCTTTGGCGCCTTTTTTATACTTATCGTTTGCCTTGAGTATGCTAGAATCGCCGGCTAT
TAAAAGATTTTGTCTATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: AAA ATPase; Type IV Pilus Assembly Protein TapV; Motility Protein FimV; FimV N-Terminal Domain Protein; Latent Nuclear Antigen; TPR Repeat-Containing Protein; AAA ATPase Containing Von Willebrand Factor Type A

Number of amino acids: Translated: 957; Mature: 957

Protein sequence:

>957_residues
MNFRTSHLVGLIATGLVAIAAPSINPVAAEPLKITGPDGQVRLNEQNSQSIRQYGPTTSADTFWSIAQAVKPDNSVTVYQ
VMTALYDANPHAFSSKNYNSLERGMILLVPTKAVMQQTSQIDAKARAERNDRNWSTAVAKSSVAPKTVVQKTVPPEAVAA
KIEAQKVTVAKPSVGVKSNPVIAELSAEVDALTKQMEEIQALNLELTDELARASDEIVVGSTDTEAFQQQITQLKEENAL
LKQALQDTKSENEALNQQLQLKQQQLAASSAPEQEPTSDLWRTLMDNPLLLMLGAALPALIVVALFWLFIRRRSDANSEQ
QESGGAAENELSGMKDDTAIEDKSDDADGLAVHLDTDDAAVQAPLQELAVVGAVTQAEQEEQDIVVEDSHDEGQSLDDLW
AEAMGEQEQDGANDFDAFQKQSKSPEEEDLDSLLAGFDEPAEQADEDLSLNEKPFVAEDDDLDALLAGFDEPAEQADDNE
QSFVAQGVAQGSSQESAQDDTQNDDLDALLASFDEPAEQAVGTQEDDIDALLADFDSENQQLEEAHEPEVKVAEDDLDAL
LAELDDKPHDEYNADALSDEMAAELELGFEIAAELDLSEDDAQQAKPDSELDSELDALLAEFDSPADVSDIEQEQELQQA
SETELAITEPAIDETPVEIKEASAAITKDSSSLDFDLSDFEPSSLTANTDSRDAEPSNNHDEELLEFTLPEPEPEPEPEP
EPELSSELDPQVIEKTDKESGFFDDLKGNKKTEENSLDWESIAAQSGNDDPAELGAELAFAATEKVEVSDDELLSGLVSK
GAAQDTALELDADETFSLDDDSKMTVDEALAALDAEELGAKELSKSAVAMHDLTSFQKDNGFIDIDRLLSEADEDSGEID
LYKELDVDMGELDSLKGSTPMVDVDDEENSVNAKLDLARAYIEIDDSDSARALLKEVELDGNDRQQAEALGLLKELV

Sequences:

>Translated_957_residues
MNFRTSHLVGLIATGLVAIAAPSINPVAAEPLKITGPDGQVRLNEQNSQSIRQYGPTTSADTFWSIAQAVKPDNSVTVYQ
VMTALYDANPHAFSSKNYNSLERGMILLVPTKAVMQQTSQIDAKARAERNDRNWSTAVAKSSVAPKTVVQKTVPPEAVAA
KIEAQKVTVAKPSVGVKSNPVIAELSAEVDALTKQMEEIQALNLELTDELARASDEIVVGSTDTEAFQQQITQLKEENAL
LKQALQDTKSENEALNQQLQLKQQQLAASSAPEQEPTSDLWRTLMDNPLLLMLGAALPALIVVALFWLFIRRRSDANSEQ
QESGGAAENELSGMKDDTAIEDKSDDADGLAVHLDTDDAAVQAPLQELAVVGAVTQAEQEEQDIVVEDSHDEGQSLDDLW
AEAMGEQEQDGANDFDAFQKQSKSPEEEDLDSLLAGFDEPAEQADEDLSLNEKPFVAEDDDLDALLAGFDEPAEQADDNE
QSFVAQGVAQGSSQESAQDDTQNDDLDALLASFDEPAEQAVGTQEDDIDALLADFDSENQQLEEAHEPEVKVAEDDLDAL
LAELDDKPHDEYNADALSDEMAAELELGFEIAAELDLSEDDAQQAKPDSELDSELDALLAEFDSPADVSDIEQEQELQQA
SETELAITEPAIDETPVEIKEASAAITKDSSSLDFDLSDFEPSSLTANTDSRDAEPSNNHDEELLEFTLPEPEPEPEPEP
EPELSSELDPQVIEKTDKESGFFDDLKGNKKTEENSLDWESIAAQSGNDDPAELGAELAFAATEKVEVSDDELLSGLVSK
GAAQDTALELDADETFSLDDDSKMTVDEALAALDAEELGAKELSKSAVAMHDLTSFQKDNGFIDIDRLLSEADEDSGEID
LYKELDVDMGELDSLKGSTPMVDVDDEENSVNAKLDLARAYIEIDDSDSARALLKEVELDGNDRQQAEALGLLKELV
>Mature_957_residues
MNFRTSHLVGLIATGLVAIAAPSINPVAAEPLKITGPDGQVRLNEQNSQSIRQYGPTTSADTFWSIAQAVKPDNSVTVYQ
VMTALYDANPHAFSSKNYNSLERGMILLVPTKAVMQQTSQIDAKARAERNDRNWSTAVAKSSVAPKTVVQKTVPPEAVAA
KIEAQKVTVAKPSVGVKSNPVIAELSAEVDALTKQMEEIQALNLELTDELARASDEIVVGSTDTEAFQQQITQLKEENAL
LKQALQDTKSENEALNQQLQLKQQQLAASSAPEQEPTSDLWRTLMDNPLLLMLGAALPALIVVALFWLFIRRRSDANSEQ
QESGGAAENELSGMKDDTAIEDKSDDADGLAVHLDTDDAAVQAPLQELAVVGAVTQAEQEEQDIVVEDSHDEGQSLDDLW
AEAMGEQEQDGANDFDAFQKQSKSPEEEDLDSLLAGFDEPAEQADEDLSLNEKPFVAEDDDLDALLAGFDEPAEQADDNE
QSFVAQGVAQGSSQESAQDDTQNDDLDALLASFDEPAEQAVGTQEDDIDALLADFDSENQQLEEAHEPEVKVAEDDLDAL
LAELDDKPHDEYNADALSDEMAAELELGFEIAAELDLSEDDAQQAKPDSELDSELDALLAEFDSPADVSDIEQEQELQQA
SETELAITEPAIDETPVEIKEASAAITKDSSSLDFDLSDFEPSSLTANTDSRDAEPSNNHDEELLEFTLPEPEPEPEPEP
EPELSSELDPQVIEKTDKESGFFDDLKGNKKTEENSLDWESIAAQSGNDDPAELGAELAFAATEKVEVSDDELLSGLVSK
GAAQDTALELDADETFSLDDDSKMTVDEALAALDAEELGAKELSKSAVAMHDLTSFQKDNGFIDIDRLLSEADEDSGEID
LYKELDVDMGELDSLKGSTPMVDVDDEENSVNAKLDLARAYIEIDDSDSARALLKEVELDGNDRQQAEALGLLKELV

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103694; Mature: 103694

Theoretical pI: Translated: 3.62; Mature: 3.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRTSHLVGLIATGLVAIAAPSINPVAAEPLKITGPDGQVRLNEQNSQSIRQYGPTTSA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHCCCCCCH
DTFWSIAQAVKPDNSVTVYQVMTALYDANPHAFSSKNYNSLERGMILLVPTKAVMQQTSQ
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHH
IDAKARAERNDRNWSTAVAKSSVAPKTVVQKTVPPEAVAAKIEAQKVTVAKPSVGVKSNP
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCC
VIAELSAEVDALTKQMEEIQALNLELTDELARASDEIVVGSTDTEAFQQQITQLKEENAL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
LKQALQDTKSENEALNQQLQLKQQQLAASSAPEQEPTSDLWRTLMDNPLLLMLGAALPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
IVVALFWLFIRRRSDANSEQQESGGAAENELSGMKDDTAIEDKSDDADGLAVHLDTDDAA
HHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHH
VQAPLQELAVVGAVTQAEQEEQDIVVEDSHDEGQSLDDLWAEAMGEQEQDGANDFDAFQK
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH
QSKSPEEEDLDSLLAGFDEPAEQADEDLSLNEKPFVAEDDDLDALLAGFDEPAEQADDNE
HCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCH
QSFVAQGVAQGSSQESAQDDTQNDDLDALLASFDEPAEQAVGTQEDDIDALLADFDSENQ
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCHH
QLEEAHEPEVKVAEDDLDALLAELDDKPHDEYNADALSDEMAAELELGFEIAAELDLSED
HHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHEEEECCCCCC
DAQQAKPDSELDSELDALLAEFDSPADVSDIEQEQELQQASETELAITEPAIDETPVEIK
HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
EASAAITKDSSSLDFDLSDFEPSSLTANTDSRDAEPSNNHDEELLEFTLPEPEPEPEPEP
HHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
EPELSSELDPQVIEKTDKESGFFDDLKGNKKTEENSLDWESIAAQSGNDDPAELGAELAF
CCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH
AATEKVEVSDDELLSGLVSKGAAQDTALELDADETFSLDDDSKMTVDEALAALDAEELGA
HHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHHCH
KELSKSAVAMHDLTSFQKDNGFIDIDRLLSEADEDSGEIDLYKELDVDMGELDSLKGSTP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHCCCCCC
MVDVDDEENSVNAKLDLARAYIEIDDSDSARALLKEVELDGNDRQQAEALGLLKELV
EEECCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MNFRTSHLVGLIATGLVAIAAPSINPVAAEPLKITGPDGQVRLNEQNSQSIRQYGPTTSA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHCCCCCCH
DTFWSIAQAVKPDNSVTVYQVMTALYDANPHAFSSKNYNSLERGMILLVPTKAVMQQTSQ
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHH
IDAKARAERNDRNWSTAVAKSSVAPKTVVQKTVPPEAVAAKIEAQKVTVAKPSVGVKSNP
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCC
VIAELSAEVDALTKQMEEIQALNLELTDELARASDEIVVGSTDTEAFQQQITQLKEENAL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
LKQALQDTKSENEALNQQLQLKQQQLAASSAPEQEPTSDLWRTLMDNPLLLMLGAALPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
IVVALFWLFIRRRSDANSEQQESGGAAENELSGMKDDTAIEDKSDDADGLAVHLDTDDAA
HHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHH
VQAPLQELAVVGAVTQAEQEEQDIVVEDSHDEGQSLDDLWAEAMGEQEQDGANDFDAFQK
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH
QSKSPEEEDLDSLLAGFDEPAEQADEDLSLNEKPFVAEDDDLDALLAGFDEPAEQADDNE
HCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCH
QSFVAQGVAQGSSQESAQDDTQNDDLDALLASFDEPAEQAVGTQEDDIDALLADFDSENQ
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCHH
QLEEAHEPEVKVAEDDLDALLAELDDKPHDEYNADALSDEMAAELELGFEIAAELDLSED
HHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHEEEECCCCCC
DAQQAKPDSELDSELDALLAEFDSPADVSDIEQEQELQQASETELAITEPAIDETPVEIK
HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
EASAAITKDSSSLDFDLSDFEPSSLTANTDSRDAEPSNNHDEELLEFTLPEPEPEPEPEP
HHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
EPELSSELDPQVIEKTDKESGFFDDLKGNKKTEENSLDWESIAAQSGNDDPAELGAELAF
CCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH
AATEKVEVSDDELLSGLVSKGAAQDTALELDADETFSLDDDSKMTVDEALAALDAEELGA
HHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHHCH
KELSKSAVAMHDLTSFQKDNGFIDIDRLLSEADEDSGEIDLYKELDVDMGELDSLKGSTP
HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHCCCCCC
MVDVDDEENSVNAKLDLARAYIEIDDSDSARALLKEVELDGNDRQQAEALGLLKELV
EEECCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA