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The map label for this gene is ybcL [H]

Identifier: 157961423

GI number: 157961423

Start: 1935129

End: 1935680

Strand: Direct

Name: ybcL [H]

Synonym: Spea_1597

Alternate gene names: 157961423

Gene position: 1935129-1935680 (Clockwise)

Preceding gene: 157961421

Following gene: 157961427

Centisome position: 37.4

GC content: 49.09

Gene sequence:

>552_bases
ATGAGGCTCAATCAAACCCTGTTACTGGCACTGTTTTGCTTGCTGGTATTCCCAAGCCAGGCCATAGAGCTTAACAGTAT
TGATATCAGCGAAGGCAAGACGCTCAAGAAAGCCCAGATATTTAATCAATGGGGCTGTAGCGGGGAAAATAGTTCTCCTG
AACTCAGTTGGAGTGAGATCCCTATAGGCTCGAAAAGTTTTGCTGTGACCATGTACGACCCAGATGCACCAACAGGCAGT
GGCTGGTGGCATTGGCTGGTTGTTAATTTACCCGCTAACACCCAAGGCTTGCCTGCAAACTCGGGGGTAAAAGGAGGGGC
GAATCTTCCAGAGGGGGCGAGTATGGTCAATAATGATTTTGGCTTTAAGGGATTTGGCGGCGCCTGTCCGCCAGCAGGTT
CTGCGCCACACAATTATCAGATCACCGTTTATGCACTGGATGTCGCTCATATTGAGTTGCCAGATAACGCAACGGCGGCA
TTGGCGGGATACAATATCTATCAACATCTTCTCGGTAAGGCTACATTGACTGCGCCAACTAATGCTAGATAG

Upstream 100 bases:

>100_bases
AATCTAAGTCACGGCATCTGAACTTAAAATAGTCAGATTTTCGACTATGCTTATTGAGCTGTGAACTAGTCATATCAAAT
TGATAAAGGTAGGTAAATCT

Downstream 100 bases:

>100_bases
GCTTTGTGCTTATTAATTAAAGCTGTTAGCGCAGAAGTAGGCTGAGCGAGATAGCGAGAAATTGATATGAAAAAGGCAGC
ATATATATGCTGCCTTTTGC

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRLNQTLLLALFCLLVFPSQAIELNSIDISEGKTLKKAQIFNQWGCSGENSSPELSWSEIPIGSKSFAVTMYDPDAPTGS
GWWHWLVVNLPANTQGLPANSGVKGGANLPEGASMVNNDFGFKGFGGACPPAGSAPHNYQITVYALDVAHIELPDNATAA
LAGYNIYQHLLGKATLTAPTNAR

Sequences:

>Translated_183_residues
MRLNQTLLLALFCLLVFPSQAIELNSIDISEGKTLKKAQIFNQWGCSGENSSPELSWSEIPIGSKSFAVTMYDPDAPTGS
GWWHWLVVNLPANTQGLPANSGVKGGANLPEGASMVNNDFGFKGFGGACPPAGSAPHNYQITVYALDVAHIELPDNATAA
LAGYNIYQHLLGKATLTAPTNAR
>Mature_183_residues
MRLNQTLLLALFCLLVFPSQAIELNSIDISEGKTLKKAQIFNQWGCSGENSSPELSWSEIPIGSKSFAVTMYDPDAPTGS
GWWHWLVVNLPANTQGLPANSGVKGGANLPEGASMVNNDFGFKGFGGACPPAGSAPHNYQITVYALDVAHIELPDNATAA
LAGYNIYQHLLGKATLTAPTNAR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=176, Percent_Identity=46.5909090909091, Blast_Score=176, Evalue=8e-46,
Organism=Escherichia coli, GI1786990, Length=157, Percent_Identity=47.1337579617834, Blast_Score=156, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19432; Mature: 19432

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNQTLLLALFCLLVFPSQAIELNSIDISEGKTLKKAQIFNQWGCSGENSSPELSWSEI
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHCC
PIGSKSFAVTMYDPDAPTGSGWWHWLVVNLPANTQGLPANSGVKGGANLPEGASMVNNDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GFKGFGGACPPAGSAPHNYQITVYALDVAHIELPDNATAALAGYNIYQHLLGKATLTAPT
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHHHCCEEECCCC
NAR
CCC
>Mature Secondary Structure
MRLNQTLLLALFCLLVFPSQAIELNSIDISEGKTLKKAQIFNQWGCSGENSSPELSWSEI
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHCC
PIGSKSFAVTMYDPDAPTGSGWWHWLVVNLPANTQGLPANSGVKGGANLPEGASMVNNDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GFKGFGGACPPAGSAPHNYQITVYALDVAHIELPDNATAALAGYNIYQHLLGKATLTAPT
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEHHHHHHHHHHHCCEEECCCC
NAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]