| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961418
Identifier: 157961418
GI number: 157961418
Start: 1931621
End: 1932406
Strand: Direct
Name: 157961418
Synonym: Spea_1592
Alternate gene names: NA
Gene position: 1931621-1932406 (Clockwise)
Preceding gene: 157961417
Following gene: 157961419
Centisome position: 37.33
GC content: 48.85
Gene sequence:
>786_bases ATGGAACTGCTTGAGCAAGTGCTTGATACTCTACTGGTAACCATACGTGATGTGGTACCCATTGCGATTATCTTATTTGG CTTTCAGCTCGGGGTGCTTAAAAGGCCCGTGGCGAATTGGCGCCGGGTTGCCGCTGGCTTTGTTTATGTGATTTTAGGGC TCAGCTTCTTCTTAGTAGGCCTTGAGATGGCCCTGTTTCCCATCGGTGAGAGTATGGCTGAGCAACTGACCTCCCATGAG TTTATCCATGAAGGGGATTTGCAAAATACCGTCAACGCTTGGCAGGACTATTATTGGGTTTATATCTTCGCCGCGGCGAT AGGCTTTAGTACCACGATTGCAGAGCCATCACTTATCGCGGTTGCGATAAAGGCTAACCAAGTATCCGGTGGCACCATAG GCATTCAAGGCTTGCGTATATCAGTGGCAATTGGGGTTGCCTTCGGTATTGCGCTAGGGTGTTTCCGTATTGTGGTGGGG GATCCTATTCATTACTACATTATGGCTGGTTATGTGCTGGTGGTGATCCAGACCTTTTATGCCCCCAAAATGATTGTCCC GCTTGCCTATGATTCGGGCGGTGTGACCACCTCTACCGTAACCGTGCCGTTAGTGGCTGCGTTAGGCTTAGGTTTAGCAA CCAATGTCGAGGGACGAAACCCGCTTATTGATGGCTTTGGCCTGATAGCCTTTGCTAGTTTGTTTCCAATGATCACTGTG ATGGGCTATGCCCAGTTAGTGGAATTTAAGAACAGAACCCAAAAGGAGCGAGATAATGCGCTTTAA
Upstream 100 bases:
>100_bases TTAAGGGGCGCAATCCTATGCTTGATGGTTTTGGCTTAATTGCCTTTACCAGCTTAATGCCGATGATTTTTGTACTAATT TACGGAATGGTGGTGCTCTG
Downstream 100 bases:
>100_bases ATTGATTCTAGTGTTTATTGATGATGCCTGTACCGATGCGATCTTAGATGCGGCTCGTAGTAAAGGCGCTACTGGCGCCA CAGTGATTAACCATGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MELLEQVLDTLLVTIRDVVPIAIILFGFQLGVLKRPVANWRRVAAGFVYVILGLSFFLVGLEMALFPIGESMAEQLTSHE FIHEGDLQNTVNAWQDYYWVYIFAAAIGFSTTIAEPSLIAVAIKANQVSGGTIGIQGLRISVAIGVAFGIALGCFRIVVG DPIHYYIMAGYVLVVIQTFYAPKMIVPLAYDSGGVTTSTVTVPLVAALGLGLATNVEGRNPLIDGFGLIAFASLFPMITV MGYAQLVEFKNRTQKERDNAL
Sequences:
>Translated_261_residues MELLEQVLDTLLVTIRDVVPIAIILFGFQLGVLKRPVANWRRVAAGFVYVILGLSFFLVGLEMALFPIGESMAEQLTSHE FIHEGDLQNTVNAWQDYYWVYIFAAAIGFSTTIAEPSLIAVAIKANQVSGGTIGIQGLRISVAIGVAFGIALGCFRIVVG DPIHYYIMAGYVLVVIQTFYAPKMIVPLAYDSGGVTTSTVTVPLVAALGLGLATNVEGRNPLIDGFGLIAFASLFPMITV MGYAQLVEFKNRTQKERDNAL >Mature_261_residues MELLEQVLDTLLVTIRDVVPIAIILFGFQLGVLKRPVANWRRVAAGFVYVILGLSFFLVGLEMALFPIGESMAEQLTSHE FIHEGDLQNTVNAWQDYYWVYIFAAAIGFSTTIAEPSLIAVAIKANQVSGGTIGIQGLRISVAIGVAFGIALGCFRIVVG DPIHYYIMAGYVLVVIQTFYAPKMIVPLAYDSGGVTTSTVTVPLVAALGLGLATNVEGRNPLIDGFGLIAFASLFPMITV MGYAQLVEFKNRTQKERDNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28268; Mature: 28268
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLEQVLDTLLVTIRDVVPIAIILFGFQLGVLKRPVANWRRVAAGFVYVILGLSFFLVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEMALFPIGESMAEQLTSHEFIHEGDLQNTVNAWQDYYWVYIFAAAIGFSTTIAEPSLIA HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VAIKANQVSGGTIGIQGLRISVAIGVAFGIALGCFRIVVGDPIHYYIMAGYVLVVIQTFY EEEEECCCCCCEEEEEHEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC APKMIVPLAYDSGGVTTSTVTVPLVAALGLGLATNVEGRNPLIDGFGLIAFASLFPMITV CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MGYAQLVEFKNRTQKERDNAL HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELLEQVLDTLLVTIRDVVPIAIILFGFQLGVLKRPVANWRRVAAGFVYVILGLSFFLVG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEMALFPIGESMAEQLTSHEFIHEGDLQNTVNAWQDYYWVYIFAAAIGFSTTIAEPSLIA HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VAIKANQVSGGTIGIQGLRISVAIGVAFGIALGCFRIVVGDPIHYYIMAGYVLVVIQTFY EEEEECCCCCCEEEEEHEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC APKMIVPLAYDSGGVTTSTVTVPLVAALGLGLATNVEGRNPLIDGFGLIAFASLFPMITV CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MGYAQLVEFKNRTQKERDNAL HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA