| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961417
Identifier: 157961417
GI number: 157961417
Start: 1930887
End: 1931621
Strand: Direct
Name: 157961417
Synonym: Spea_1591
Alternate gene names: NA
Gene position: 1930887-1931621 (Clockwise)
Preceding gene: 157961410
Following gene: 157961418
Centisome position: 37.31
GC content: 46.53
Gene sequence:
>735_bases ATGGCTTCAATCAATCAGCTGTTAAAAGCACTGTTCAATAGTTTCAAGGATCTGATCCCTATTATATTAGTGGTCTGCTT TTTCGAAATATTCGTCCTACAGCAAGCGCCGGAGAATCTGTTTTCGATTCTAATTGGCCTTGTCTTCATCGTAGTCGGTT TAACCTTTTTTGTTTTCGGTCTCGAAATGGGATTGTTTCCTATCGGTGAGTCGCTTGCTCAAGCGTTGGCTCGTAAAGGC AGCGTTTTCTGGTTGGTGGTTTTTTCATTTTCATTGGGCTTTGGCACGACATTAGCCGAACCCGCTTTAACCGCTGTTGC TAATGAGGCTGCAGAAGTGGCGGCTGAGGCTGGAGCAATAAAAACCTCAGAGGAAGCGATGGATAGCTACGCCATGGGGC TAAGGTTAACTGTGGCGTTATCGGTTGGCCTCGCTATTTTGCTCGGGGTGGTGCGGATCTTAAAAGGTTGGCCCATCCAC TATCTCATTATCTCGGGTTACATCATCGTCATGGTGCTGACCTCATTTGCTCCTGAAAATATTATCGGTATTGCCTATGA CTCAGGCGGGGTGACGACATCGACGATTACCGTGCCACTAGTGACAGCGCTCGGTGTAGGTTTAGCCTCTGTGATTAAGG GGCGCAATCCTATGCTTGATGGTTTTGGCTTAATTGCCTTTACCAGCTTAATGCCGATGATTTTTGTACTAATTTACGGA ATGGTGGTGCTCTGA
Upstream 100 bases:
>100_bases ATATTTGATCCAGCTCAAACTTGTTGTGGTGATTGTTAGTTATTTGTTGTGATCCATGCTGATTTTGGCACACTAAAAAT GTGGCCCAAAAGGAATGAGT
Downstream 100 bases:
>100_bases TGGAACTGCTTGAGCAAGTGCTTGATACTCTACTGGTAACCATACGTGATGTGGTACCCATTGCGATTATCTTATTTGGC TTTCAGCTCGGGGTGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MASINQLLKALFNSFKDLIPIILVVCFFEIFVLQQAPENLFSILIGLVFIVVGLTFFVFGLEMGLFPIGESLAQALARKG SVFWLVVFSFSLGFGTTLAEPALTAVANEAAEVAAEAGAIKTSEEAMDSYAMGLRLTVALSVGLAILLGVVRILKGWPIH YLIISGYIIVMVLTSFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASVIKGRNPMLDGFGLIAFTSLMPMIFVLIYG MVVL
Sequences:
>Translated_244_residues MASINQLLKALFNSFKDLIPIILVVCFFEIFVLQQAPENLFSILIGLVFIVVGLTFFVFGLEMGLFPIGESLAQALARKG SVFWLVVFSFSLGFGTTLAEPALTAVANEAAEVAAEAGAIKTSEEAMDSYAMGLRLTVALSVGLAILLGVVRILKGWPIH YLIISGYIIVMVLTSFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASVIKGRNPMLDGFGLIAFTSLMPMIFVLIYG MVVL >Mature_243_residues ASINQLLKALFNSFKDLIPIILVVCFFEIFVLQQAPENLFSILIGLVFIVVGLTFFVFGLEMGLFPIGESLAQALARKGS VFWLVVFSFSLGFGTTLAEPALTAVANEAAEVAAEAGAIKTSEEAMDSYAMGLRLTVALSVGLAILLGVVRILKGWPIHY LIISGYIIVMVLTSFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASVIKGRNPMLDGFGLIAFTSLMPMIFVLIYGM VVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25934; Mature: 25802
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASINQLLKALFNSFKDLIPIILVVCFFEIFVLQQAPENLFSILIGLVFIVVGLTFFVFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LEMGLFPIGESLAQALARKGSVFWLVVFSFSLGFGTTLAEPALTAVANEAAEVAAEAGAI HHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC KTSEEAMDSYAMGLRLTVALSVGLAILLGVVRILKGWPIHYLIISGYIIVMVLTSFAPEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC IIGIAYDSGGVTTSTITVPLVTALGVGLASVIKGRNPMLDGFGLIAFTSLMPMIFVLIYG EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MVVL HHHC >Mature Secondary Structure ASINQLLKALFNSFKDLIPIILVVCFFEIFVLQQAPENLFSILIGLVFIVVGLTFFVFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LEMGLFPIGESLAQALARKGSVFWLVVFSFSLGFGTTLAEPALTAVANEAAEVAAEAGAI HHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC KTSEEAMDSYAMGLRLTVALSVGLAILLGVVRILKGWPIHYLIISGYIIVMVLTSFAPEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC IIGIAYDSGGVTTSTITVPLVTALGVGLASVIKGRNPMLDGFGLIAFTSLMPMIFVLIYG EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MVVL HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA