| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961287
Identifier: 157961287
GI number: 157961287
Start: 1783304
End: 1783774
Strand: Direct
Name: 157961287
Synonym: Spea_1461
Alternate gene names: NA
Gene position: 1783304-1783774 (Clockwise)
Preceding gene: 157961286
Following gene: 157961288
Centisome position: 34.46
GC content: 45.22
Gene sequence:
>471_bases ATGCAGCACCTATTTTGGTTAGTTGAGGGACAAATTGCAGGACGCAGTGGACCCAATAAAGATCCTTGGGATCTGCTCGA GTTAAAGGCTGCCGGTTTCGATGCCATTTTATCTGTTAATAACGGTGAAGATTGTATTGAGGCTGAATTGACCGCCGCTG GATTAGATTACTTATGCGTACCTTTCTCTCGCAATATACCGCCTAAGGCGGAAGACTTAGATTATTGTGTTGAACAGGTT CCAAAAGCATTGGCGTTTATCCGTGAATGCGAAGCGCAGGATAAAACGGTACTCATTCATTGCCGCTCGGGTAAAGATAG AACGGGCCTCATCATGGCTTATTACTTGATGGATAATGGTGCCGCTCCACTTCATGCCGTAAGTCAAGTTAGAGCCATAC GTGACATCGCATTTAGCGCCGAAGGTTGGGATCAATTTGCTTTTGATGTGCTTTATGCGCTACAAGAGTAA
Upstream 100 bases:
>100_bases CTTAGCTCAGTAATAAAGCGATAGCACAAGATATAGGCTTTAGGTATTCTCTTGGCGATTAAACCTTATTTGAAACTCAA AATATATTTTAGGAAAAACT
Downstream 100 bases:
>100_bases TTAATACCCAGCAATAGAATAAAAGAATGAATGCAAATGGATTGCAGTCGCTTATCTTTTTAAGAAGTGTTTTTCTTTGG GCAGCTATTACTGTGCTAGT
Product: dual specificity protein phosphatase
Products: NA
Alternate protein names: Tyrosine-Specific Protein Phosphatase
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MQHLFWLVEGQIAGRSGPNKDPWDLLELKAAGFDAILSVNNGEDCIEAELTAAGLDYLCVPFSRNIPPKAEDLDYCVEQV PKALAFIRECEAQDKTVLIHCRSGKDRTGLIMAYYLMDNGAAPLHAVSQVRAIRDIAFSAEGWDQFAFDVLYALQE
Sequences:
>Translated_156_residues MQHLFWLVEGQIAGRSGPNKDPWDLLELKAAGFDAILSVNNGEDCIEAELTAAGLDYLCVPFSRNIPPKAEDLDYCVEQV PKALAFIRECEAQDKTVLIHCRSGKDRTGLIMAYYLMDNGAAPLHAVSQVRAIRDIAFSAEGWDQFAFDVLYALQE >Mature_156_residues MQHLFWLVEGQIAGRSGPNKDPWDLLELKAAGFDAILSVNNGEDCIEAELTAAGLDYLCVPFSRNIPPKAEDLDYCVEQV PKALAFIRECEAQDKTVLIHCRSGKDRTGLIMAYYLMDNGAAPLHAVSQVRAIRDIAFSAEGWDQFAFDVLYALQE
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17322; Mature: 17322
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLFWLVEGQIAGRSGPNKDPWDLLELKAAGFDAILSVNNGEDCIEAELTAAGLDYLCV CCCEEEEEECEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE PFSRNIPPKAEDLDYCVEQVPKALAFIRECEAQDKTVLIHCRSGKDRTGLIMAYYLMDNG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCC AAPLHAVSQVRAIRDIAFSAEGWDQFAFDVLYALQE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQHLFWLVEGQIAGRSGPNKDPWDLLELKAAGFDAILSVNNGEDCIEAELTAAGLDYLCV CCCEEEEEECEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE PFSRNIPPKAEDLDYCVEQVPKALAFIRECEAQDKTVLIHCRSGKDRTGLIMAYYLMDNG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCC AAPLHAVSQVRAIRDIAFSAEGWDQFAFDVLYALQE CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA