| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is rhlE [H]
Identifier: 157961286
GI number: 157961286
Start: 1781753
End: 1783081
Strand: Direct
Name: rhlE [H]
Synonym: Spea_1460
Alternate gene names: 157961286
Gene position: 1781753-1783081 (Clockwise)
Preceding gene: 157961285
Following gene: 157961287
Centisome position: 34.43
GC content: 45.6
Gene sequence:
>1329_bases ATGACTCAGCCAGTATCTTCAACCGACCAAGTAGCAACGCAAACTGTAGCGGACACACAAGCTCACAGTGACTTTACCCA ACTAGGGCTAATCCCTGAGTTGCTTGAAACACTTAAACTGCTGAGTTATACAAAGCCGACAGCGATTCAATCGCATATTA TTCCGGCGGTTTTGGACGGGAAAGATGTGCTAGGCGGCGCTAAAACGGGTTCGGGTAAAACAGCTGCTTTTGCTCTACCT ATCATTCAAAAGCTTGCTAAGGCATCACCTCGTAAAGCGGGCGGTAATTTTGTCTCTTGTTTGGTGTTAGTGCCTACTCG TGAGCTAGCACAGCAAGTTGCCGACAGCTTTATGCGCTATTCGCAGTTGATTAAACCTAACCTAAAAACCCTTGCGGTTT ATGGTGGCGTGTCAACTAATGTGCAAATGCAAAGCTTACGTGGCGGCGCCGATATTGTTGTGGCTACACCGGGGCGTTTA ATCGATCTGATTTCAAGTAATGCGCTTAAGCTAGATAACACCACGACTTTGGTTTTGGATGAAGCCGATCGCATGTTGAG CCTAGGTTTTACTGAAGAGCTGAACGAGCTTTTAGCTAAGCTACCTAAAACTAAGCAAACCTTATTGTTCTCAGCCACTT TCCCTGAAGAAGTGCGCGAGCTTACCGATTCGCTATTGAATAACCCTGTAGAAGTACAGTTACAAAGTAGCGAAGAGAGC ACACTGGTTCAACGCGTTATTACCGTTAATCGTAACCGTAAAACGGCTTTGTTAGCTCAATTGATTAAAGATAATCAGTG GCAACAGGTGCTTATCTTTGCTAGCGCAAAATATAGCTGTAACCGTTTGGCGCAAAAATTAGAAAATGCAGGCATTACTG CCGAAGTATTTCATAGTGATAAAGGGCAGGGTGCCCGTAACCGTGTACTTGAGGAGTTCAAGTCAGGCGAAATAAGCGTG CTTATCGCGACGGATATCGCTGCCCGTGGTATCGATATTGAAAAACTACCAATAGTGATTAACTTCGAATTACCTAGAAG TCCTGTTGATTATATGCACCGTATCGGTCGAAGCGGTCGTGCGGGTGAAGCGGGCTTAGCAATGAGCTTGATTTCTCACG ATGAATATCAGCACTTTAAGTTGATCGAGAAGAAAAATAAGCTGAGATTAGAGCGCGAGCAGATCCCTGGCTTTGAAGCC GATCTTGAAGCGCCAGAAGACTGCCCATCACGTGAAGTTAAGCCGATGGCAAAGCCTGCTGGCACGGGGAAAAAACACCG TAATAAATTACCGAAAGCCAATGCCGAACTTTGGGGCAAGAAGTCTTAA
Upstream 100 bases:
>100_bases GGAAGTTCCCTCAAGCTGCACACTAAGAAAGATAAGCTTTTAAAGTGATATTAGCGTAGAATAAGCGCCTTATTTTTGAT TAGGCGTTTACCCGTAAATT
Downstream 100 bases:
>100_bases ATCTCGCTATTAATGGCGTAAAACCTTCTAGCGACTGAACATGAAATGGACTCTATACGAGTCCATTTTTTTAGCAAATA AGTCTGGTTTTGTGGTTTAG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTQPVSSTDQVATQTVADTQAHSDFTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDGKDVLGGAKTGSGKTAAFALP IIQKLAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNVQMQSLRGGADIVVATPGRL IDLISSNALKLDNTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES TLVQRVITVNRNRKTALLAQLIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEEFKSGEISV LIATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEA DLEAPEDCPSREVKPMAKPAGTGKKHRNKLPKANAELWGKKS
Sequences:
>Translated_442_residues MTQPVSSTDQVATQTVADTQAHSDFTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDGKDVLGGAKTGSGKTAAFALP IIQKLAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNVQMQSLRGGADIVVATPGRL IDLISSNALKLDNTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES TLVQRVITVNRNRKTALLAQLIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEEFKSGEISV LIATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEA DLEAPEDCPSREVKPMAKPAGTGKKHRNKLPKANAELWGKKS >Mature_441_residues TQPVSSTDQVATQTVADTQAHSDFTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDGKDVLGGAKTGSGKTAAFALPI IQKLAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRYSQLIKPNLKTLAVYGGVSTNVQMQSLRGGADIVVATPGRLI DLISSNALKLDNTTTLVLDEADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEEST LVQRVITVNRNRKTALLAQLIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSDKGQGARNRVLEEFKSGEISVL IATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGRAGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEAD LEAPEDCPSREVKPMAKPAGTGKKHRNKLPKANAELWGKKS
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=38.3333333333333, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=38.3333333333333, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=37.1830985915493, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=37.5706214689266, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=37.5706214689266, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI222352149, Length=350, Percent_Identity=37.7142857142857, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=41.2073490813648, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI20149629, Length=390, Percent_Identity=35.8974358974359, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI41327771, Length=381, Percent_Identity=35.1706036745407, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI224593278, Length=369, Percent_Identity=38.7533875338753, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI164664518, Length=379, Percent_Identity=35.8839050131926, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI41327773, Length=360, Percent_Identity=35.8333333333333, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=35.4054054054054, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=35.4054054054054, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=35.4054054054054, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=36.1271676300578, Blast_Score=224, Evalue=9e-59, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=35.054347826087, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=35.054347826087, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI7661920, Length=396, Percent_Identity=32.0707070707071, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.195530726257, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=34.6153846153846, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=34.6153846153846, Blast_Score=214, Evalue=9e-56, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=34.6153846153846, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=34.6153846153846, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327776, Length=388, Percent_Identity=33.2474226804124, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI51094101, Length=355, Percent_Identity=36.3380281690141, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI164419743, Length=355, Percent_Identity=36.3380281690141, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI188035877, Length=375, Percent_Identity=34.6666666666667, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=33.2394366197183, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=33.2394366197183, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=32.3943661971831, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13129006, Length=404, Percent_Identity=32.1782178217822, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI50659095, Length=397, Percent_Identity=32.4937027707809, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=33.7531486146096, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI83700235, Length=385, Percent_Identity=34.8051948051948, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI4503529, Length=386, Percent_Identity=34.4559585492228, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI38327634, Length=336, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=32.1052631578947, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=32.9608938547486, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=32.1937321937322, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI38569503, Length=351, Percent_Identity=32.1937321937322, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=31.4769975786925, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI4826686, Length=331, Percent_Identity=32.3262839879154, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI6005743, Length=366, Percent_Identity=31.6939890710383, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI256223453, Length=380, Percent_Identity=31.0526315789474, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI8922886, Length=364, Percent_Identity=31.5934065934066, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=31.0344827586207, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI256773275, Length=422, Percent_Identity=29.6208530805687, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=30.1939058171745, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI154759257, Length=439, Percent_Identity=27.3348519362187, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI62241024, Length=328, Percent_Identity=32.0121951219512, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI9966805, Length=335, Percent_Identity=34.6268656716418, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=38.0733944954128, Blast_Score=125, Evalue=8e-29, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=48.5488126649077, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI87082221, Length=379, Percent_Identity=40.6332453825858, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1787605, Length=374, Percent_Identity=37.9679144385027, Blast_Score=251, Evalue=9e-68, Organism=Escherichia coli, GI1788930, Length=379, Percent_Identity=39.3139841688654, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1790214, Length=359, Percent_Identity=35.933147632312, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI48994977, Length=340, Percent_Identity=23.5294117647059, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17510559, Length=402, Percent_Identity=38.0597014925373, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=37.8223495702006, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI17552114, Length=382, Percent_Identity=36.6492146596859, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI71987143, Length=386, Percent_Identity=35.2331606217617, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=38.6301369863014, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=38.6301369863014, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=38.6301369863014, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=36.6197183098592, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=33.7662337662338, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17555296, Length=412, Percent_Identity=34.7087378640777, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=38.375350140056, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=34.1597796143251, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=33.8842975206612, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=34.9162011173184, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=34.9162011173184, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17537549, Length=353, Percent_Identity=35.1274787535411, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507945, Length=359, Percent_Identity=35.933147632312, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI115532548, Length=384, Percent_Identity=34.6354166666667, Blast_Score=210, Evalue=9e-55, Organism=Caenorhabditis elegans, GI115532546, Length=384, Percent_Identity=34.6354166666667, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507881, Length=380, Percent_Identity=34.2105263157895, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=34.6049046321526, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=33.2439678284182, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=32.3943661971831, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=32.7077747989276, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=34.3007915567282, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17509811, Length=357, Percent_Identity=35.0140056022409, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17505370, Length=345, Percent_Identity=36.231884057971, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=32.2077922077922, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=26.3888888888889, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI25148203, Length=424, Percent_Identity=26.8867924528302, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17556951, Length=377, Percent_Identity=31.2997347480106, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=30.2387267904509, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI17536099, Length=418, Percent_Identity=30.1435406698565, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17536101, Length=418, Percent_Identity=30.1435406698565, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17536103, Length=404, Percent_Identity=29.9504950495049, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=28.1767955801105, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17507641, Length=419, Percent_Identity=29.8329355608592, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI32564046, Length=401, Percent_Identity=29.6758104738155, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25148291, Length=393, Percent_Identity=26.4631043256997, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=32.6923076923077, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71997889, Length=423, Percent_Identity=28.3687943262411, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI25148205, Length=347, Percent_Identity=25.0720461095101, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17557982, Length=423, Percent_Identity=23.8770685579196, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=40.9090909090909, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=40.2816901408451, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=40.2332361516035, Blast_Score=243, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=400, Percent_Identity=36.75, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=401, Percent_Identity=35.6608478802993, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=38.8429752066116, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=392, Percent_Identity=35.969387755102, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6320041, Length=393, Percent_Identity=35.3689567430025, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=33.6927223719677, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320119, Length=358, Percent_Identity=33.7988826815642, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=386, Percent_Identity=35.2331606217617, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=34.1333333333333, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=32.010582010582, Blast_Score=200, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=383, Percent_Identity=32.8981723237598, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=396, Percent_Identity=32.5757575757576, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=396, Percent_Identity=32.5757575757576, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=32.2314049586777, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=32.1256038647343, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=29.9191374663073, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=31.3513513513514, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=28.361858190709, Blast_Score=166, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=334, Percent_Identity=32.0359281437126, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6320173, Length=360, Percent_Identity=33.0555555555556, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=417, Percent_Identity=27.3381294964029, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=28.7292817679558, Blast_Score=123, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=26.7605633802817, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=245, Percent_Identity=27.7551020408163, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323844, Length=381, Percent_Identity=24.4094488188976, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=35.8490566037736, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.5650969529086, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644479, Length=367, Percent_Identity=35.4223433242507, Blast_Score=244, Evalue=6e-65, Organism=Drosophila melanogaster, GI281361218, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI24644481, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI24644483, Length=367, Percent_Identity=35.4223433242507, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644487, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI45551833, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24644485, Length=359, Percent_Identity=35.933147632312, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=36.4902506963788, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=34.7222222222222, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=36.7231638418079, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=380, Percent_Identity=35, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=35.0649350649351, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24583279, Length=380, Percent_Identity=35, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=37.883008356546, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI21356161, Length=389, Percent_Identity=37.7892030848329, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI17136814, Length=355, Percent_Identity=39.7183098591549, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17985987, Length=424, Percent_Identity=33.9622641509434, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24645031, Length=395, Percent_Identity=33.1645569620253, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.1823361823362, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=35.0785340314136, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI17977678, Length=393, Percent_Identity=33.3333333333333, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI281365720, Length=329, Percent_Identity=34.9544072948328, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24582080, Length=387, Percent_Identity=34.3669250645995, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582078, Length=387, Percent_Identity=34.3669250645995, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136248, Length=387, Percent_Identity=34.3669250645995, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582075, Length=387, Percent_Identity=34.3669250645995, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=32.6760563380282, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=32.6760563380282, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=32.6760563380282, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571808, Length=384, Percent_Identity=31.25, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28571809, Length=384, Percent_Identity=31.25, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=33.1670822942643, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI17647335, Length=376, Percent_Identity=30.3191489361702, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.8681318681319, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI21355559, Length=380, Percent_Identity=32.3684210526316, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI24642822, Length=401, Percent_Identity=30.6733167082294, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=30.5177111716621, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI20130173, Length=486, Percent_Identity=28.1893004115226, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24668515, Length=365, Percent_Identity=30.1369863013699, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=37.7777777777778, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=37.7777777777778, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17136666, Length=403, Percent_Identity=28.0397022332506, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24640164, Length=354, Percent_Identity=25.7062146892655, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48395; Mature: 48264
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPVSSTDQVATQTVADTQAHSDFTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDG CCCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCHHEECC KDVLGGAKTGSGKTAAFALPIIQKLAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRY CHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH SQLIKPNLKTLAVYGGVSTNVQMQSLRGGADIVVATPGRLIDLISSNALKLDNTTTLVLD HHHHCCCCEEEEEECCCCCCEEHEECCCCCEEEEECCCHHHHHHCCCCEEECCCEEEEEE EADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES CCHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHH TLVQRVITVNRNRKTALLAQLIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSD HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC KGQGARNRVLEEFKSGEISVLIATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGR CCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCEEECCEEEEECCCCCHHHHHHHCCCCCC AGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEADLEAPEDCPSREVKPMAKPA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTGKKHRNKLPKANAELWGKKS CCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TQPVSSTDQVATQTVADTQAHSDFTQLGLIPELLETLKLLSYTKPTAIQSHIIPAVLDG CCCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHCCHHEECC KDVLGGAKTGSGKTAAFALPIIQKLAKASPRKAGGNFVSCLVLVPTRELAQQVADSFMRY CHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHH SQLIKPNLKTLAVYGGVSTNVQMQSLRGGADIVVATPGRLIDLISSNALKLDNTTTLVLD HHHHCCCCEEEEEECCCCCCEEHEECCCCCEEEEECCCHHHHHHCCCCEEECCCEEEEEE EADRMLSLGFTEELNELLAKLPKTKQTLLFSATFPEEVRELTDSLLNNPVEVQLQSSEES CCHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHH TLVQRVITVNRNRKTALLAQLIKDNQWQQVLIFASAKYSCNRLAQKLENAGITAEVFHSD HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECC KGQGARNRVLEEFKSGEISVLIATDIAARGIDIEKLPIVINFELPRSPVDYMHRIGRSGR CCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCEEECCEEEEECCCCCHHHHHHHCCCCCC AGEAGLAMSLISHDEYQHFKLIEKKNKLRLEREQIPGFEADLEAPEDCPSREVKPMAKPA CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTGKKHRNKLPKANAELWGKKS CCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]