Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is wzxC [C]

Identifier: 157961252

GI number: 157961252

Start: 1733240

End: 1734607

Strand: Reverse

Name: wzxC [C]

Synonym: Spea_1426

Alternate gene names: 157961252

Gene position: 1734607-1733240 (Counterclockwise)

Preceding gene: 157961253

Following gene: 157961251

Centisome position: 33.52

GC content: 47.08

Gene sequence:

>1368_bases
ATGCAAAGCTATGTGTCATACCGAGACTCTTTATCCACAGCCTTAAACGGCGTGCTAGCCAAAGGCCTATTTTGGCTAGG
TTCGGCTCAAGTGCTTGGCCGCATCGTTCGCCTAGGCTCTAGCATTATTATTGCGCGCTTACTGACACCCGAAGTCTTTG
GTCAGGTTGCCATCATACTCACCTGTTTTGAGATCATCTGCACCCCAACGCGTCGCATCTCTAGCGCGGCACTGATTAAA
ATGGATGACAACCAAGTTAAACAATCTCTTACTGCGGCCAATCGAGTTAACTGGTTAGCCGCTATCACCGCCTTCGTTGC
CATGAGCTTACTCAGCTGGCCGCTTGCAATCTACTACGATGACTTGCAGCTAATTCTTCCTATGATACTCATGGCAACAA
GCTATTTACTGCTGCCTTTTGGCATGCTCTATGCCGCACTCAATCTGCGCTTAAACCGAATGCGAGTCGTTGGTAGGGCC
GTACTATGGCAGACGGTATTTGATGCACTGCTAACGGGCTGCTTCGCTTTACTCGGGTTTGGGATTTGGGCGATTATTTT
GCCCAAAGTCATTGTGGTATTTATATGGATTGGGGTTCATAGATACCACAATCCCTTGCCTGAGGCCTCATCGAGCGCAA
ATTCCTTACCCCCGTCCCAAGAACAGCGATGGCAGCCACTTCCTCTGTTGCCAGCAAAATCCAAAACAATACTTAAGTTT
GGCATACAAGTTGGCCTAGGTGACTTGGCTATCGCTCTAAGGCAAAATATTGATTACATCTTGGTGGGCTATTTTCTTGG
GATAGAAGCCCTAGGAGTGTACTTCTTTGCCTTCAACGCCAGTTTAGGCATTAGTTTAGGGCTAGTACAAAGTTATGGCA
CCGCGCTTTATTCCTATCTTTGTCAAAAAGATAAAGATGCTGAACCCACACTGCTTACATTAGAGCAAAAATACTTTAAG
TCACTTAAGTTCATCATGTTACTGACAGTACCCGTAATTAGCCTGCAAGCAGCACTCGCACCACTCTATGTCCCTTGGGT
GTACGGTCAGAAATGGTTAGATGCTGGCGCACTGCCAGTGTTTATCTTGCTTTGCCTAAGCGGCCTCGTGAGGCCACTAG
GAGAAGCAGCCAGTCAATATCTTATTAGTGCCGGTAGAAGCCAATTTAACCTGTTGTATAACAGTGTATTCACTTTCATT
TTGGCAGTCACAATCGCTATCTCTAGCAGCTGGGGGCTACAGGCCGTCGCCCTAGGGATCTTATTGTCACACCTTTTTGT
TATGCCCAGTTTCACACTCTACTTAAAGCTGACTCAAACCACTACAGACGCTCCTCATTGTCGCTCGGAGGCACACTATG
ACTGCTAA

Upstream 100 bases:

>100_bases
CCTGTATTTAACCTTATAACTCGTCACTAATAACCAATGACTGGTGATGTCATCACTCAAATAGATGTGATTCGCAGCGG
CCTCTTAAACAGGTACTCCT

Downstream 100 bases:

>100_bases
TTTAACCTATAAGAAAGTCGCAACCACAAAGGTTTCGGTGGTGATGCCTATCTATAATGTCGAAGCCTTTGTTGAAGATG
CGATTATCTCGGTTCTCACC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Colanic Acid Exporter; Polysaccharide Export Transporter; Polysaccharide Biosynthesis Export Protein-Like; Virulence Factor MVIN Superfamily

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MQSYVSYRDSLSTALNGVLAKGLFWLGSAQVLGRIVRLGSSIIIARLLTPEVFGQVAIILTCFEIICTPTRRISSAALIK
MDDNQVKQSLTAANRVNWLAAITAFVAMSLLSWPLAIYYDDLQLILPMILMATSYLLLPFGMLYAALNLRLNRMRVVGRA
VLWQTVFDALLTGCFALLGFGIWAIILPKVIVVFIWIGVHRYHNPLPEASSSANSLPPSQEQRWQPLPLLPAKSKTILKF
GIQVGLGDLAIALRQNIDYILVGYFLGIEALGVYFFAFNASLGISLGLVQSYGTALYSYLCQKDKDAEPTLLTLEQKYFK
SLKFIMLLTVPVISLQAALAPLYVPWVYGQKWLDAGALPVFILLCLSGLVRPLGEAASQYLISAGRSQFNLLYNSVFTFI
LAVTIAISSSWGLQAVALGILLSHLFVMPSFTLYLKLTQTTTDAPHCRSEAHYDC

Sequences:

>Translated_455_residues
MQSYVSYRDSLSTALNGVLAKGLFWLGSAQVLGRIVRLGSSIIIARLLTPEVFGQVAIILTCFEIICTPTRRISSAALIK
MDDNQVKQSLTAANRVNWLAAITAFVAMSLLSWPLAIYYDDLQLILPMILMATSYLLLPFGMLYAALNLRLNRMRVVGRA
VLWQTVFDALLTGCFALLGFGIWAIILPKVIVVFIWIGVHRYHNPLPEASSSANSLPPSQEQRWQPLPLLPAKSKTILKF
GIQVGLGDLAIALRQNIDYILVGYFLGIEALGVYFFAFNASLGISLGLVQSYGTALYSYLCQKDKDAEPTLLTLEQKYFK
SLKFIMLLTVPVISLQAALAPLYVPWVYGQKWLDAGALPVFILLCLSGLVRPLGEAASQYLISAGRSQFNLLYNSVFTFI
LAVTIAISSSWGLQAVALGILLSHLFVMPSFTLYLKLTQTTTDAPHCRSEAHYDC
>Mature_455_residues
MQSYVSYRDSLSTALNGVLAKGLFWLGSAQVLGRIVRLGSSIIIARLLTPEVFGQVAIILTCFEIICTPTRRISSAALIK
MDDNQVKQSLTAANRVNWLAAITAFVAMSLLSWPLAIYYDDLQLILPMILMATSYLLLPFGMLYAALNLRLNRMRVVGRA
VLWQTVFDALLTGCFALLGFGIWAIILPKVIVVFIWIGVHRYHNPLPEASSSANSLPPSQEQRWQPLPLLPAKSKTILKF
GIQVGLGDLAIALRQNIDYILVGYFLGIEALGVYFFAFNASLGISLGLVQSYGTALYSYLCQKDKDAEPTLLTLEQKYFK
SLKFIMLLTVPVISLQAALAPLYVPWVYGQKWLDAGALPVFILLCLSGLVRPLGEAASQYLISAGRSQFNLLYNSVFTFI
LAVTIAISSSWGLQAVALGILLSHLFVMPSFTLYLKLTQTTTDAPHCRSEAHYDC

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50193; Mature: 50193

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYVSYRDSLSTALNGVLAKGLFWLGSAQVLGRIVRLGSSIIIARLLTPEVFGQVAIIL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH
TCFEIICTPTRRISSAALIKMDDNQVKQSLTAANRVNWLAAITAFVAMSLLSWPLAIYYD
HHHHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DLQLILPMILMATSYLLLPFGMLYAALNLRLNRMRVVGRAVLWQTVFDALLTGCFALLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAIILPKVIVVFIWIGVHRYHNPLPEASSSANSLPPSQEQRWQPLPLLPAKSKTILKF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
GIQVGLGDLAIALRQNIDYILVGYFLGIEALGVYFFAFNASLGISLGLVQSYGTALYSYL
HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
CQKDKDAEPTLLTLEQKYFKSLKFIMLLTVPVISLQAALAPLYVPWVYGQKWLDAGALPV
HHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHH
FILLCLSGLVRPLGEAASQYLISAGRSQFNLLYNSVFTFILAVTIAISSSWGLQAVALGI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLSHLFVMPSFTLYLKLTQTTTDAPHCRSEAHYDC
HHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSYVSYRDSLSTALNGVLAKGLFWLGSAQVLGRIVRLGSSIIIARLLTPEVFGQVAIIL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH
TCFEIICTPTRRISSAALIKMDDNQVKQSLTAANRVNWLAAITAFVAMSLLSWPLAIYYD
HHHHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
DLQLILPMILMATSYLLLPFGMLYAALNLRLNRMRVVGRAVLWQTVFDALLTGCFALLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAIILPKVIVVFIWIGVHRYHNPLPEASSSANSLPPSQEQRWQPLPLLPAKSKTILKF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
GIQVGLGDLAIALRQNIDYILVGYFLGIEALGVYFFAFNASLGISLGLVQSYGTALYSYL
HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
CQKDKDAEPTLLTLEQKYFKSLKFIMLLTVPVISLQAALAPLYVPWVYGQKWLDAGALPV
HHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHH
FILLCLSGLVRPLGEAASQYLISAGRSQFNLLYNSVFTFILAVTIAISSSWGLQAVALGI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLSHLFVMPSFTLYLKLTQTTTDAPHCRSEAHYDC
HHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA