| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cheB1 [H]
Identifier: 157961210
GI number: 157961210
Start: 1679983
End: 1681164
Strand: Direct
Name: cheB1 [H]
Synonym: Spea_1382
Alternate gene names: 157961210
Gene position: 1679983-1681164 (Clockwise)
Preceding gene: 157961209
Following gene: 157961211
Centisome position: 32.47
GC content: 47.88
Gene sequence:
>1182_bases ATGGGCATTAAAGTTTTAGTCGTTGATGATTCGAGTTTTTTTAGACGACGTGTTAGTGAGATAGTGAATCAAGACCCTGA GCTTGAGGTGGTGGGGACTGCCTGTAATGGTGCAGAGGCGGTGAAGATGGCTGCAGAGCTGAACCCGCAAGTGATCACCA TGGATATCGAAATGCCTGTCATGGATGGGATCACTGCGGTTAAAGAGATCATGGCGAGTAAGCCAATTCCAATCTTGATG TTTTCATCATTGACGCACGATGGTGCTAAGGCAACGTTAGAAGCGTTGGATGCCGGCGCTTTAGATTTCTTACCAAAACG CTTTGAAGATATCGCAAGTAACAAAGATGACGCTATAGCGCTGTTACAGCAACGTATTCGAGCATTAGGCCGCCGTCGCT TGTTTAGACCCATAACTCGAACATTGTCGAGTAACGATAGAGCGCTTTCAGGCAATGAAAGAGCTCAATCTGTCACAGAT AGATCTCGCCCAATCTCAAGTTTTTCTCGAACGAGTGTTAATGCACCAGCAACTAGCGGTCACTCGTTAACTGCTAGCGA TAAGCCCGTGAGTCGTTCTAGTGTTGTGACCCGTAGTAGTGGAAAACAATACAAGACGTTATTAATCGGTACCTCTACAG GTGGGCCTGTTGCTTTACAAAAGGTGTTAACTCAATTCCCTGCCAATTATCCACATCCTATTTTGCTTATCCAACATATG CCTGCTGCCTTTACGCCAACATTTGCGGCTAGGCTTAATGGCTTGTGTAAGATAGAAGTTAAAGAGGCGGTGAGCGGAGA CCAGTTAAGGCCGGGTTGTGCATATCTTGCCCCTGGAGGTATGCAGATGATGCTAGAGCGAGGCGGAGCCTATGGCAGAG TTAAGATCATTGCTGGTAAGGCGGATATGAACTACAAGCCTTGTGTCGATATTACTTTTGCCTCAGCTTCGAAGGTGCTT GGTGGTGATGTGTTGGCCGTAGTGCTCACGGGCATGGGAGCCGATGGCCGTGAAGGGGCCAGAATGCTCAAGAGTATCGG TGCGACCATTTGGGCGCAAGATGAGGCCAGCTGTGTGGTTTATGGCATGCCTCAAGCCGTCGCGGCTGCGGGTATTGCAA CCAAATCAATTGCGTTAGAGCATATGGCTGAATCGATTTTAAAAGAGACCGTTAATGGCTAA
Upstream 100 bases:
>100_bases ACAGGAGCTAACACTGGTTAGCATAGGGAATAACGCAGCTTGTTATTCCCTTTTTTACATACAGCATTGAGCAGGCCTGT GGTGCAGTAAAGGAATTTGA
Downstream 100 bases:
>100_bases GGCAGCTTTGAAGCAGAGTGTCATTCAGCAACGGGGAGAAATCAATACGCTGGCGCTGCTGTTAATGTTTTTGCTGAGTA TTGCGTCATTTACCTTCGGC
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MGIKVLVVDDSSFFRRRVSEIVNQDPELEVVGTACNGAEAVKMAAELNPQVITMDIEMPVMDGITAVKEIMASKPIPILM FSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPITRTLSSNDRALSGNERAQSVTD RSRPISSFSRTSVNAPATSGHSLTASDKPVSRSSVVTRSSGKQYKTLLIGTSTGGPVALQKVLTQFPANYPHPILLIQHM PAAFTPTFAARLNGLCKIEVKEAVSGDQLRPGCAYLAPGGMQMMLERGGAYGRVKIIAGKADMNYKPCVDITFASASKVL GGDVLAVVLTGMGADGREGARMLKSIGATIWAQDEASCVVYGMPQAVAAAGIATKSIALEHMAESILKETVNG
Sequences:
>Translated_393_residues MGIKVLVVDDSSFFRRRVSEIVNQDPELEVVGTACNGAEAVKMAAELNPQVITMDIEMPVMDGITAVKEIMASKPIPILM FSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPITRTLSSNDRALSGNERAQSVTD RSRPISSFSRTSVNAPATSGHSLTASDKPVSRSSVVTRSSGKQYKTLLIGTSTGGPVALQKVLTQFPANYPHPILLIQHM PAAFTPTFAARLNGLCKIEVKEAVSGDQLRPGCAYLAPGGMQMMLERGGAYGRVKIIAGKADMNYKPCVDITFASASKVL GGDVLAVVLTGMGADGREGARMLKSIGATIWAQDEASCVVYGMPQAVAAAGIATKSIALEHMAESILKETVNG >Mature_392_residues GIKVLVVDDSSFFRRRVSEIVNQDPELEVVGTACNGAEAVKMAAELNPQVITMDIEMPVMDGITAVKEIMASKPIPILMF SSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPITRTLSSNDRALSGNERAQSVTDR SRPISSFSRTSVNAPATSGHSLTASDKPVSRSSVVTRSSGKQYKTLLIGTSTGGPVALQKVLTQFPANYPHPILLIQHMP AAFTPTFAARLNGLCKIEVKEAVSGDQLRPGCAYLAPGGMQMMLERGGAYGRVKIIAGKADMNYKPCVDITFASASKVLG GDVLAVVLTGMGADGREGARMLKSIGATIWAQDEASCVVYGMPQAVAAAGIATKSIALEHMAESILKETVNG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=394, Percent_Identity=36.0406091370558, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1790299, Length=190, Percent_Identity=31.0526315789474, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788550, Length=145, Percent_Identity=28.9655172413793, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 41791; Mature: 41660
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKVLVVDDSSFFRRRVSEIVNQDPELEVVGTACNGAEAVKMAAELNPQVITMDIEMPV CCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVKEIMASKPIPILMFSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRIRALGRRRLFRPITRTLSSNDRALSGNERAQSVTDRSRPISSFSRTSVNAPATSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC HSLTASDKPVSRSSVVTRSSGKQYKTLLIGTSTGGPVALQKVLTQFPANYPHPILLIQHM CEECCCCCCCCHHHEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECC PAAFTPTFAARLNGLCKIEVKEAVSGDQLRPGCAYLAPGGMQMMLERGGAYGRVKIIAGK CCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEEEEC ADMNYKPCVDITFASASKVLGGDVLAVVLTGMGADGREGARMLKSIGATIWAQDEASCVV CCCCCCCCEEEEECCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEE YGMPQAVAAAGIATKSIALEHMAESILKETVNG EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIKVLVVDDSSFFRRRVSEIVNQDPELEVVGTACNGAEAVKMAAELNPQVITMDIEMPV CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVKEIMASKPIPILMFSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRIRALGRRRLFRPITRTLSSNDRALSGNERAQSVTDRSRPISSFSRTSVNAPATSG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC HSLTASDKPVSRSSVVTRSSGKQYKTLLIGTSTGGPVALQKVLTQFPANYPHPILLIQHM CEECCCCCCCCHHHEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECC PAAFTPTFAARLNGLCKIEVKEAVSGDQLRPGCAYLAPGGMQMMLERGGAYGRVKIIAGK CCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEEEEC ADMNYKPCVDITFASASKVLGGDVLAVVLTGMGADGREGARMLKSIGATIWAQDEASCVV CCCCCCCCEEEEECCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEE YGMPQAVAAAGIATKSIALEHMAESILKETVNG EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]