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The map label for this gene is yoeC [H]

Identifier: 157961083

GI number: 157961083

Start: 1527993

End: 1528553

Strand: Reverse

Name: yoeC [H]

Synonym: Spea_1255

Alternate gene names: 157961083

Gene position: 1528553-1527993 (Counterclockwise)

Preceding gene: 157961084

Following gene: 157961080

Centisome position: 29.54

GC content: 39.75

Gene sequence:

>561_bases
ATGGCAGAAGTCCAAGCAATCAAGAAGTTAGACACAATTAATCTCATTAGTCACTTGCTTGAGATTCGATACAGTAAGCA
GATGGCAGACATTTGGAACATCGGGTTAAACCTCGCTTTACGTATTTCTGATCTGCTATCCATTAAGTTTAGCGACCTTC
AGCAAGATAGGTTAGTTATTCAAGAAACAAAAACCGGCAAGTTAGCCAATATTAAGCTGAATGCTAAAGTGATAAAAGCC
ATAGAGGATATTCAAGTAAACCATCATGACCATATCTACCTATTTCAATCTTATCGAAATCCCCAGGCCAAATACTCTAA
GCCTAAACCACTAACAAGACGCGCAGTGACTAAAGCCTTTCGTATCGTTGGTGAAGAACTAAAGGTAGCCTTAGGCACGC
ACTCCATGCGCAAAACAAGAGGTTATCATCTTTATCAAAAGACCAAAGACATTGGTAGAGTAATGAAGATGCTCAGGCAT
GGTTCTGAAGGCGTGACACTAAGGTACATAGGGATTGAGCAAGAGGATGTTGATAACGACTTCATTAACTTAGAGATATG
A

Upstream 100 bases:

>100_bases
CAAAACGGGAACCTGCAAACCTAGGCTACATGGGGGGGCCGCTATCCCTGAACCTCTTAGGGGCCCAATTAAACGATATA
CATCAAAAAAGGAATCTATC

Downstream 100 bases:

>100_bases
AATCTTGTTGTTTTTGTTATCGGAGGACCTTTAACGTCCTCCTTTATTTTTTGTCTAATTGAACATTATTCGGCTATAAC
CAATGTTACGATTACCGTCA

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAEVQAIKKLDTINLISHLLEIRYSKQMADIWNIGLNLALRISDLLSIKFSDLQQDRLVIQETKTGKLANIKLNAKVIKA
IEDIQVNHHDHIYLFQSYRNPQAKYSKPKPLTRRAVTKAFRIVGEELKVALGTHSMRKTRGYHLYQKTKDIGRVMKMLRH
GSEGVTLRYIGIEQEDVDNDFINLEI

Sequences:

>Translated_186_residues
MAEVQAIKKLDTINLISHLLEIRYSKQMADIWNIGLNLALRISDLLSIKFSDLQQDRLVIQETKTGKLANIKLNAKVIKA
IEDIQVNHHDHIYLFQSYRNPQAKYSKPKPLTRRAVTKAFRIVGEELKVALGTHSMRKTRGYHLYQKTKDIGRVMKMLRH
GSEGVTLRYIGIEQEDVDNDFINLEI
>Mature_185_residues
AEVQAIKKLDTINLISHLLEIRYSKQMADIWNIGLNLALRISDLLSIKFSDLQQDRLVIQETKTGKLANIKLNAKVIKAI
EDIQVNHHDHIYLFQSYRNPQAKYSKPKPLTRRAVTKAFRIVGEELKVALGTHSMRKTRGYHLYQKTKDIGRVMKMLRHG
SEGVTLRYIGIEQEDVDNDFINLEI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 21509; Mature: 21378

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVQAIKKLDTINLISHLLEIRYSKQMADIWNIGLNLALRISDLLSIKFSDLQQDRLVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHCCCCCCCEEE
QETKTGKLANIKLNAKVIKAIEDIQVNHHDHIYLFQSYRNPQAKYSKPKPLTRRAVTKAF
EECCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RIVGEELKVALGTHSMRKTRGYHLYQKTKDIGRVMKMLRHGSEGVTLRYIGIEQEDVDND
HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCC
FINLEI
EEEEEC
>Mature Secondary Structure 
AEVQAIKKLDTINLISHLLEIRYSKQMADIWNIGLNLALRISDLLSIKFSDLQQDRLVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHCCCCCCCEEE
QETKTGKLANIKLNAKVIKAIEDIQVNHHDHIYLFQSYRNPQAKYSKPKPLTRRAVTKAF
EECCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RIVGEELKVALGTHSMRKTRGYHLYQKTKDIGRVMKMLRHGSEGVTLRYIGIEQEDVDND
HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCC
FINLEI
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]