Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961048

Identifier: 157961048

GI number: 157961048

Start: 1485341

End: 1485868

Strand: Reverse

Name: 157961048

Synonym: Spea_1220

Alternate gene names: NA

Gene position: 1485868-1485341 (Counterclockwise)

Preceding gene: 157961049

Following gene: 157961047

Centisome position: 28.71

GC content: 46.97

Gene sequence:

>528_bases
ATGATGCTTGTTTCAAATTCGCCTGCTTTAAATACGCCTGTTTTAAGTCCACTTGTTTCAAATCATAGCCCACAGCAAGT
AGGCAACACGGCACAGGCAAATAACCTTAACCAAGTCCAGAAAAGTTCAAGTTCAAGTTCACCATTTAACAGCCAGCAAA
CTCTTCAATCAAATGGTGCCGCCGTGGTACAAATCGATACCGTGACCCTTAGCGCTAAGTCTACAGCTCTTAGCGAGCAA
GCTCTAGACGCCAATCCCCCACAAACACTCCCCGCACAGCCAAAGCAGCCTAACCAAGGGGAGAAAGTCGAAGGGTATGT
GGAATATAAAAAAGCCAAGCTTCAGTACCAGATTTATGCAGACATGGCAGGGGTTGCCACAGGAAACGGCAATGGGCTCT
CCCCTATAACGGCTTACTATCTATCAAACAATGACGATGCTCGAGCGGCGACGGTAAACGCTAAGTCCCAGCAACTACAG
TTAGCAAGTATGCAAACCTACTGTAGAGACAAGCCAAAACGCTCATGA

Upstream 100 bases:

>100_bases
CTCTAATACCAATTCTAAAGAAGCATTTAAAATCTGGTTCAGCTTATGTACAGCTATTAAACGCTAAGGTCATAATTATA
AATAAGACTGACATGGAAAG

Downstream 100 bases:

>100_bases
TAAATAATACCAATCAGTATAACCCTGACTAAATTTTGCAACTCACTCGAAGACAGTAAGGACAAACTTACTCTTTCTCT
AAAATCCTATTGTTCTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ
ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ
LASMQTYCRDKPKRS

Sequences:

>Translated_175_residues
MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ
ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ
LASMQTYCRDKPKRS
>Mature_175_residues
MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGAAVVQIDTVTLSAKSTALSEQ
ALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYADMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQ
LASMQTYCRDKPKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18629; Mature: 18629

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGA
CEEECCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCC
AVVQIDTVTLSAKSTALSEQALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYA
EEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEHHEEEEEEEE
DMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQLASMQTYCRDKPKRS
CCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMLVSNSPALNTPVLSPLVSNHSPQQVGNTAQANNLNQVQKSSSSSSPFNSQQTLQSNGA
CEEECCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCC
AVVQIDTVTLSAKSTALSEQALDANPPQTLPAQPKQPNQGEKVEGYVEYKKAKLQYQIYA
EEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEHHEEEEEEEE
DMAGVATGNGNGLSPITAYYLSNNDDARAATVNAKSQQLQLASMQTYCRDKPKRS
CCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA