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The map label for this gene is yggT [C]

Identifier: 157960953

GI number: 157960953

Start: 1363058

End: 1363606

Strand: Reverse

Name: yggT [C]

Synonym: Spea_1125

Alternate gene names: 157960953

Gene position: 1363606-1363058 (Counterclockwise)

Preceding gene: 157960954

Following gene: 157960952

Centisome position: 26.35

GC content: 44.63

Gene sequence:

>549_bases
ATGAATGCATTTAGTTTTCTGATAAGCACGGTATTCGATCTATACCTGATGGTCGTGGTGTTACGTATCTGGCTACAATT
AGCTAGAGCCGATTTTTATAACCCTTTCAGTCAGTTTATCGTAAAGGCCACTCACCCAATTGTTGGCCCTTTAAGACGCG
TACTGCCCTCTTTTGGCAGTTTTGATACCGCCTCTTTCGTACTCGCAATAACGGTTGTGGTACTTAAGTTTGTCATCTTA
AGCCTGATGGCTGGTGCGGCAATTAATGTACCTACCTTACTGCTTGTCTCTTTAGTGTCGGTGATTAAAGAAGCCGGCGT
ATTGCTATTTTGGATGCTGATCCTACGTGCGATTTTAAGCTGGGTAAGCCAAGGCAGTAACCCAATCGAAATGGTAATGG
GTCAGTTAACTGAGCCGCTACTTGCGCCAATCCGCCGCATTTTGCCAGCGATGGGCGGACTAGACTTATCACTGCTAGTG
ATGATGATTATCCTTAACTTCGTCAATATCTTACTAGCGCAATACATACCATTCTGGGCTAGCGTATAG

Upstream 100 bases:

>100_bases
GTTTGGTCGATAATGCAATGAACAATTGTATCGCCCGCGCCGAAGAGATGGCCAAGCAGTACTAGTTTTTAAATTTAACT
TGAACAAGTAGAGTAAACAG

Downstream 100 bases:

>100_bases
TGACACCAGCCATAATGCAGCAGGGCGACCTGCTGCTTCAACTCTATATTCAGCCTAAAGCTAGTCGCGACCAAATAGTC
GGCCTACATGGTGAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLARADFYNPFSQFIVKATHPIVGPLRRVLPSFGSFDTASFVLAITVVVLKFVIL
SLMAGAAINVPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPAMGGLDLSLLV
MMIILNFVNILLAQYIPFWASV

Sequences:

>Translated_182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLARADFYNPFSQFIVKATHPIVGPLRRVLPSFGSFDTASFVLAITVVVLKFVIL
SLMAGAAINVPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPAMGGLDLSLLV
MMIILNFVNILLAQYIPFWASV
>Mature_182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLARADFYNPFSQFIVKATHPIVGPLRRVLPSFGSFDTASFVLAITVVVLKFVIL
SLMAGAAINVPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPAMGGLDLSLLV
MMIILNFVNILLAQYIPFWASV

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=174, Percent_Identity=48.8505747126437, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20180; Mature: 20180

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFSFLISTVFDLYLMVVVLRIWLQLARADFYNPFSQFIVKATHPIVGPLRRVLPSFGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCC
FDTASFVLAITVVVLKFVILSLMAGAAINVPTLLLVSLVSVIKEAGVLLFWMLILRAILS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSQGSNPIEMVMGQLTEPLLAPIRRILPAMGGLDLSLLVMMIILNFVNILLAQYIPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SV
CC
>Mature Secondary Structure
MNAFSFLISTVFDLYLMVVVLRIWLQLARADFYNPFSQFIVKATHPIVGPLRRVLPSFGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCC
FDTASFVLAITVVVLKFVILSLMAGAAINVPTLLLVSLVSVIKEAGVLLFWMLILRAILS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSQGSNPIEMVMGQLTEPLLAPIRRILPAMGGLDLSLLVMMIILNFVNILLAQYIPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]