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The map label for this gene is yggU [C]

Identifier: 157960952

GI number: 157960952

Start: 1362771

End: 1363043

Strand: Reverse

Name: yggU [C]

Synonym: Spea_1124

Alternate gene names: 157960952

Gene position: 1363043-1362771 (Counterclockwise)

Preceding gene: 157960953

Following gene: 157960951

Centisome position: 26.34

GC content: 46.52

Gene sequence:

>273_bases
ATGCAGCAGGGCGACCTGCTGCTTCAACTCTATATTCAGCCTAAAGCTAGTCGCGACCAAATAGTCGGCCTACATGGTGA
AGAGATTAAAATAGCCATTACTGCGCCCCCCGTAGACGGCAAGGCCAACGCCCATCTTACTAAGTACCTATCGAAAGCCT
TTAAAGTCCCTAAAGGGGATATAGACATTATTAAAGGCCAGATGGGACGCCATAAACAAGTCAGGATCACCGCTCCTAAG
CTTATTCCAGCTGAAGTACAAAACCTTTTGTAA

Upstream 100 bases:

>100_bases
ACTTATCACTGCTAGTGATGATGATTATCCTTAACTTCGTCAATATCTTACTAGCGCAATACATACCATTCTGGGCTAGC
GTATAGTGACACCAGCCATA

Downstream 100 bases:

>100_bases
CCTTATAGTTATAAGAAGTTTAAGGCGTTGAGCTAAACTAAGTTCTATACTGTTAACAAGATATCTTCCTCAGGAAAACG
AATATGGTCAGGTCTTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIDIIKGQMGRHKQVRITAPK
LIPAEVQNLL

Sequences:

>Translated_90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIDIIKGQMGRHKQVRITAPK
LIPAEVQNLL
>Mature_90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIDIIKGQMGRHKQVRITAPK
LIPAEVQNLL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=85, Percent_Identity=62.3529411764706, Blast_Score=116, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 9919; Mature: 9919

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGD
CCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
IDIIKGQMGRHKQVRITAPKLIPAEVQNLL
EEEEECCCCCCCEEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGD
CCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
IDIIKGQMGRHKQVRITAPKLIPAEVQNLL
EEEEECCCCCCCEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA