| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yggX [C]
Identifier: 157960935
GI number: 157960935
Start: 1343112
End: 1343390
Strand: Reverse
Name: yggX [C]
Synonym: Spea_1107
Alternate gene names: 157960935
Gene position: 1343390-1343112 (Counterclockwise)
Preceding gene: 157960936
Following gene: 157960927
Centisome position: 25.96
GC content: 40.5
Gene sequence:
>279_bases ATGGCTCGCACAGTAAACTGCGTGTATTTAAACAAAGAAGCAGAAGGCCTAGGTTTTCAGCTCTACCCTGGCGATTTGGG AAAGCGTATTTTCGACAATGTGAGTAAAGAAGCCTGGGCTCTTTGGCAGTCAAAGCAAACCATGTTGATCAACGAAAAGA AACTTAACATGATGAATGTTGAGGATCGTAAATTTTTAGAAGAGCAGATGGTAAACTTTCTGTTTGAAGGCAAAGACGTT GAGATTGAGGGTTATGTTCCTCAAAAAGATGACGAGTAA
Upstream 100 bases:
>100_bases CGGTCTGGTATAACTTAACTCATCCACCAAAAGTTGGTTTAGCCTCGGCCACCGAGCGAATTTTGGCCGACTTAGGTTCT GTATTAAATAAGGAGTAATC
Downstream 100 bases:
>100_bases CACTGCAAGCTTATAAAATGAACCAATAAAGGCGTCGCTTAAACTTAATTTAAGCGACGCCTTTATGTTTAACGCCCCGC GCCAGTTTAAAAAACAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MARTVNCVYLNKEAEGLGFQLYPGDLGKRIFDNVSKEAWALWQSKQTMLINEKKLNMMNVEDRKFLEEQMVNFLFEGKDV EIEGYVPQKDDE
Sequences:
>Translated_92_residues MARTVNCVYLNKEAEGLGFQLYPGDLGKRIFDNVSKEAWALWQSKQTMLINEKKLNMMNVEDRKFLEEQMVNFLFEGKDV EIEGYVPQKDDE >Mature_91_residues ARTVNCVYLNKEAEGLGFQLYPGDLGKRIFDNVSKEAWALWQSKQTMLINEKKLNMMNVEDRKFLEEQMVNFLFEGKDVE IEGYVPQKDDE
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=88, Percent_Identity=71.5909090909091, Blast_Score=141, Evalue=9e-36,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 10796; Mature: 10665
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTVNCVYLNKEAEGLGFQLYPGDLGKRIFDNVSKEAWALWQSKQTMLINEKKLNMMNV CCCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEECC EDRKFLEEQMVNFLFEGKDVEIEGYVPQKDDE HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC >Mature Secondary Structure ARTVNCVYLNKEAEGLGFQLYPGDLGKRIFDNVSKEAWALWQSKQTMLINEKKLNMMNV CCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEECC EDRKFLEEQMVNFLFEGKDVEIEGYVPQKDDE HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA