Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960927

Identifier: 157960927

GI number: 157960927

Start: 1329785

End: 1330513

Strand: Reverse

Name: 157960927

Synonym: Spea_1099

Alternate gene names: NA

Gene position: 1330513-1329785 (Counterclockwise)

Preceding gene: 157960935

Following gene: 157960924

Centisome position: 25.71

GC content: 40.74

Gene sequence:

>729_bases
ATGAAAAATAATATCGTCCCACTTAACTCTAATGATCACCTTAGAATGTGCGTTACTGAGTCTAAAGACTATCGTCGCTT
TGCCGATCAACAACTCATTCCTGTTGTTTTCCACGAATTCCATCAATTAGCGACCGAGTTTCCACTGGTATTTGTTAAGA
ATAGCGAAACAGGGCAGTTTATTCCTGTTGCCATGATGGGAGTTAAAAACGACTTAAACCTCTACTGCCAAACGAGTGAA
TGGCCTGCAATGATAAAGCCTAAAGGCTTTAATAACGCACCGTTATCTTTAGTTAAAACCAGTCAGGAAAGTGACAACGT
ACTTATCTGTGTCGATACAGCCAGTCCGTTAGTGACAGAAGTCAGCGAGAATGCACAGCGCTTATTTAACGATGACAAAG
AGCAGAGTGACTACCTTAAGAAACGTACTCAAGCACTGCTAGAAATCGCCGCATTTAATGAGCAAACAGGCAACATTTGT
CAGTTGTTAGCATCGAAAAGTTTATTCACCGCAAAACAGCTAACAATTAAGCTAGCCGAAAGTCAGCAGCCAATTAACAT
CGACGGCATATATGTGGTTGATGAGCAGGCCTTAAACCAGCTAAGCAATGAAGAGTTCTTATCTTTAAAAGAAAACGGCT
TACTGCCATTAATCTACGCTCACCTAGTATCACTACAGCAGATCTCACGCCTGATTGAAAAGCAAAACAACTATGATCTG
ACTCATTAA

Upstream 100 bases:

>100_bases
TTAAAAGTATACCTAAACACAACAAACGCCACTCATTAGCAACACAAAAGCGTTCACCTACGACTGCTTAAACAAGATTA
CGTTCAAGGACCCTATAACA

Downstream 100 bases:

>100_bases
TACCAATCAACATAAATCATAGTATTAGCCAAGTTCAGCATTGCCGAACTTGGCTAAAAAGATTAACTATACCTTCTGCA
AACCGTAACGCTTTATTTTC

Product: SapC family protein

Products: NA

Alternate protein names: SapC-Related Protein; SapC-Like Protein; SapC Protein; SapC Related Protein; SAPC Family Protein; Sapc Family Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE
WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC
QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL
TH

Sequences:

>Translated_242_residues
MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE
WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC
QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL
TH
>Mature_242_residues
MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE
WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC
QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL
TH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27461; Mature: 27461

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQF
CCCCEEEECCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCE
IPVAMMGVKNDLNLYCQTSEWPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTE
EEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHH
VSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNICQLLASKSLFTAKQLTIKLAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHEEEEEC
SQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL
CCCCCCCCCEEEECHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TH
CC
>Mature Secondary Structure
MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQF
CCCCEEEECCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCE
IPVAMMGVKNDLNLYCQTSEWPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTE
EEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHH
VSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNICQLLASKSLFTAKQLTIKLAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHEEEEEC
SQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL
CCCCCCCCCEEEECHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA