| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960927
Identifier: 157960927
GI number: 157960927
Start: 1329785
End: 1330513
Strand: Reverse
Name: 157960927
Synonym: Spea_1099
Alternate gene names: NA
Gene position: 1330513-1329785 (Counterclockwise)
Preceding gene: 157960935
Following gene: 157960924
Centisome position: 25.71
GC content: 40.74
Gene sequence:
>729_bases ATGAAAAATAATATCGTCCCACTTAACTCTAATGATCACCTTAGAATGTGCGTTACTGAGTCTAAAGACTATCGTCGCTT TGCCGATCAACAACTCATTCCTGTTGTTTTCCACGAATTCCATCAATTAGCGACCGAGTTTCCACTGGTATTTGTTAAGA ATAGCGAAACAGGGCAGTTTATTCCTGTTGCCATGATGGGAGTTAAAAACGACTTAAACCTCTACTGCCAAACGAGTGAA TGGCCTGCAATGATAAAGCCTAAAGGCTTTAATAACGCACCGTTATCTTTAGTTAAAACCAGTCAGGAAAGTGACAACGT ACTTATCTGTGTCGATACAGCCAGTCCGTTAGTGACAGAAGTCAGCGAGAATGCACAGCGCTTATTTAACGATGACAAAG AGCAGAGTGACTACCTTAAGAAACGTACTCAAGCACTGCTAGAAATCGCCGCATTTAATGAGCAAACAGGCAACATTTGT CAGTTGTTAGCATCGAAAAGTTTATTCACCGCAAAACAGCTAACAATTAAGCTAGCCGAAAGTCAGCAGCCAATTAACAT CGACGGCATATATGTGGTTGATGAGCAGGCCTTAAACCAGCTAAGCAATGAAGAGTTCTTATCTTTAAAAGAAAACGGCT TACTGCCATTAATCTACGCTCACCTAGTATCACTACAGCAGATCTCACGCCTGATTGAAAAGCAAAACAACTATGATCTG ACTCATTAA
Upstream 100 bases:
>100_bases TTAAAAGTATACCTAAACACAACAAACGCCACTCATTAGCAACACAAAAGCGTTCACCTACGACTGCTTAAACAAGATTA CGTTCAAGGACCCTATAACA
Downstream 100 bases:
>100_bases TACCAATCAACATAAATCATAGTATTAGCCAAGTTCAGCATTGCCGAACTTGGCTAAAAAGATTAACTATACCTTCTGCA AACCGTAACGCTTTATTTTC
Product: SapC family protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC-Like Protein; SapC Protein; SapC Related Protein; SAPC Family Protein; Sapc Family Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL TH
Sequences:
>Translated_242_residues MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL TH >Mature_242_residues MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQFIPVAMMGVKNDLNLYCQTSE WPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTEVSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNIC QLLASKSLFTAKQLTIKLAESQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL TH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27461; Mature: 27461
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQF CCCCEEEECCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCE IPVAMMGVKNDLNLYCQTSEWPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTE EEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHH VSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNICQLLASKSLFTAKQLTIKLAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHEEEEEC SQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL CCCCCCCCCEEEECHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TH CC >Mature Secondary Structure MKNNIVPLNSNDHLRMCVTESKDYRRFADQQLIPVVFHEFHQLATEFPLVFVKNSETGQF CCCCEEEECCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCE IPVAMMGVKNDLNLYCQTSEWPAMIKPKGFNNAPLSLVKTSQESDNVLICVDTASPLVTE EEEEEECCCCCCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHH VSENAQRLFNDDKEQSDYLKKRTQALLEIAAFNEQTGNICQLLASKSLFTAKQLTIKLAE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHEEEEEC SQQPINIDGIYVVDEQALNQLSNEEFLSLKENGLLPLIYAHLVSLQQISRLIEKQNNYDL CCCCCCCCCEEEECHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA