Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is tal [H]

Identifier: 157960902

GI number: 157960902

Start: 1298619

End: 1299575

Strand: Reverse

Name: tal [H]

Synonym: Spea_1074

Alternate gene names: 157960902

Gene position: 1299575-1298619 (Counterclockwise)

Preceding gene: 157960903

Following gene: 157960901

Centisome position: 25.11

GC content: 44.2

Gene sequence:

>957_bases
ATGGCCAACACATTAGAACAACTTAAAGCTTTCACAACAATTGTTGCCGATACAGGTGATATTGAAGCCATAAAACGTTA
CCAGCCAGAAGACGCCACGACCAACCCCTCTCTTATTTTAAAAGCATCTGAAATTCCTGAATACAGCGCACTTATTGAAA
ACGCCATCGACTGGGCCAAAAGCCAGAGTGATGTTCTAGCGCAACAGATTGAAGATGCCGGTGATAAACTTGCCGTCAAT
ATTGGTCTTGAGATCTTAAAAATTGTTCCAGGTCGTATTTCTACAGAAGTTGATGCCCGCCTTTCATTCGATAAAGAAGG
CTCAATCGCTAAAGCACACAAGCTTATCAAGCTTTACCAAGAAGCTGGTATCGACAAGTCTCGTATCCTTATTAAGCTAG
CGTCAACTTGGGAAGGAATTTGCGCCGCTAAGCAACTTGAGCAAGAAGGTATTAACTGTAACTTAACCTTGCTATTTAGT
TTTGCTCAGGCTCGTGCATGTGCAGAAGCCGGGGTTTACCTAATCTCTCCTTTCGTTGGTCGTATCCTTGACTGGTACAA
GAAAGACACGGGTCTTGAATACAGCGCCACGGACGATCCAGGTGTAGTATCAGTAACAAGTATCTATGACTACTACAAAC
GTCATGGTTTTAATACTGTAGTTATGGGCGCAAGTTTCAGAAACACAGGCGAGATTATTGAACTTGCCGGCTGTGACAGA
CTAACCATTGGCCCTGCACTACTAGAAGAGCTACAAAATAGCACCACGCCTATCGTACAAAAGCTTCTTCCAGCAACCGA
AGTAGTTGCTCCAGAAGCTGAAATGACTGAAGCCCAGTTCCGTTGGGAGTTCAACGAAGACCCTATGGCAGTAGAGAAGC
TAGCCGAAGGTATTCGCAACTTCGCTATCGACCAGGGTAAGCTCGAAGTTATGCTAAAAGAAAAGCTTTCGTCTTAA

Upstream 100 bases:

>100_bases
TTTTTCATATATGGTTGGAATGTTCATTAAAATGGCTTTTAATAGCTGCTAAATTTATTGTCCAATCGATGCTGCTCATA
GAGTAAAGGATGTAAAACCC

Downstream 100 bases:

>100_bases
CGGAATAGGACAAGACTATGACAGAACTCACTCAACAAGCTAGCTGGCAAGCACTTGAGAAGCACAGTAAATCGCTTCCT
CATATGCGCGAACTCTTTTC

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MANTLEQLKAFTTIVADTGDIEAIKRYQPEDATTNPSLILKASEIPEYSALIENAIDWAKSQSDVLAQQIEDAGDKLAVN
IGLEILKIVPGRISTEVDARLSFDKEGSIAKAHKLIKLYQEAGIDKSRILIKLASTWEGICAAKQLEQEGINCNLTLLFS
FAQARACAEAGVYLISPFVGRILDWYKKDTGLEYSATDDPGVVSVTSIYDYYKRHGFNTVVMGASFRNTGEIIELAGCDR
LTIGPALLEELQNSTTPIVQKLLPATEVVAPEAEMTEAQFRWEFNEDPMAVEKLAEGIRNFAIDQGKLEVMLKEKLSS

Sequences:

>Translated_318_residues
MANTLEQLKAFTTIVADTGDIEAIKRYQPEDATTNPSLILKASEIPEYSALIENAIDWAKSQSDVLAQQIEDAGDKLAVN
IGLEILKIVPGRISTEVDARLSFDKEGSIAKAHKLIKLYQEAGIDKSRILIKLASTWEGICAAKQLEQEGINCNLTLLFS
FAQARACAEAGVYLISPFVGRILDWYKKDTGLEYSATDDPGVVSVTSIYDYYKRHGFNTVVMGASFRNTGEIIELAGCDR
LTIGPALLEELQNSTTPIVQKLLPATEVVAPEAEMTEAQFRWEFNEDPMAVEKLAEGIRNFAIDQGKLEVMLKEKLSS
>Mature_317_residues
ANTLEQLKAFTTIVADTGDIEAIKRYQPEDATTNPSLILKASEIPEYSALIENAIDWAKSQSDVLAQQIEDAGDKLAVNI
GLEILKIVPGRISTEVDARLSFDKEGSIAKAHKLIKLYQEAGIDKSRILIKLASTWEGICAAKQLEQEGINCNLTLLFSF
AQARACAEAGVYLISPFVGRILDWYKKDTGLEYSATDDPGVVSVTSIYDYYKRHGFNTVVMGASFRNTGEIIELAGCDRL
TIGPALLEELQNSTTPIVQKLLPATEVVAPEAEMTEAQFRWEFNEDPMAVEKLAEGIRNFAIDQGKLEVMLKEKLSS

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=324, Percent_Identity=59.2592592592593, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI1786189, Length=317, Percent_Identity=70.6624605678233, Blast_Score=452, Evalue=1e-128,
Organism=Escherichia coli, GI1788807, Length=315, Percent_Identity=64.4444444444444, Blast_Score=424, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI25153750, Length=318, Percent_Identity=56.6037735849057, Blast_Score=349, Evalue=1e-96,
Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=55.7575757575758, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=50.5154639175258, Blast_Score=91, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6321480, Length=320, Percent_Identity=54.0625, Blast_Score=339, Evalue=3e-94,
Organism=Saccharomyces cerevisiae, GI6323386, Length=322, Percent_Identity=55.9006211180124, Blast_Score=338, Evalue=6e-94,
Organism=Drosophila melanogaster, GI45549185, Length=318, Percent_Identity=59.4339622641509, Blast_Score=374, Evalue=1e-104,

Paralogues:

None

Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 35012; Mature: 34881

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTLEQLKAFTTIVADTGDIEAIKRYQPEDATTNPSLILKASEIPEYSALIENAIDWAK
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
SQSDVLAQQIEDAGDKLAVNIGLEILKIVPGRISTEVDARLSFDKEGSIAKAHKLIKLYQ
CHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHCEECCCCCCCHHHHHHHHHHHH
EAGIDKSRILIKLASTWEGICAAKQLEQEGINCNLTLLFSFAQARACAEAGVYLISPFVG
HHCCCHHHEEEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHH
RILDWYKKDTGLEYSATDDPGVVSVTSIYDYYKRHGFNTVVMGASFRNTGEIIELAGCDR
HHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCC
LTIGPALLEELQNSTTPIVQKLLPATEVVAPEAEMTEAQFRWEFNEDPMAVEKLAEGIRN
EEECHHHHHHHHCCCHHHHHHHCCHHHHCCCCHHHCHHHEEEECCCCCHHHHHHHHHHHH
FAIDQGKLEVMLKEKLSS
HCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ANTLEQLKAFTTIVADTGDIEAIKRYQPEDATTNPSLILKASEIPEYSALIENAIDWAK
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
SQSDVLAQQIEDAGDKLAVNIGLEILKIVPGRISTEVDARLSFDKEGSIAKAHKLIKLYQ
CHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHCEECCCCCCCHHHHHHHHHHHH
EAGIDKSRILIKLASTWEGICAAKQLEQEGINCNLTLLFSFAQARACAEAGVYLISPFVG
HHCCCHHHEEEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHH
RILDWYKKDTGLEYSATDDPGVVSVTSIYDYYKRHGFNTVVMGASFRNTGEIIELAGCDR
HHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCC
LTIGPALLEELQNSTTPIVQKLLPATEVVAPEAEMTEAQFRWEFNEDPMAVEKLAEGIRN
EEECHHHHHHHHCCCHHHHHHHCCHHHHCCCCHHHCHHHEEEECCCCCHHHHHHHHHHHH
FAIDQGKLEVMLKEKLSS
HCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA