| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pgi [H]
Identifier: 157960901
GI number: 157960901
Start: 1296964
End: 1298601
Strand: Reverse
Name: pgi [H]
Synonym: Spea_1073
Alternate gene names: 157960901
Gene position: 1298601-1296964 (Counterclockwise)
Preceding gene: 157960902
Following gene: 157960900
Centisome position: 25.1
GC content: 44.81
Gene sequence:
>1638_bases ATGACAGAACTCACTCAACAAGCTAGCTGGCAAGCACTTGAGAAGCACAGTAAATCGCTTCCTCATATGCGCGAACTCTT TTCTACTGAACCTGAACGCTTCGGTAATATGTCGACTCAGGCATGCGGCCTATTTTTAGATTATTCTAAAAACCGTGCTT CACAAGAGACGATGTCATTACTGTTTAATCTAGCCAAAGACTCTCAGCTTGAATCGAAAATTAAGGCGATGTTTGCAGGA CACGTGATAAACAACACAGAACAACGTGCAGTTTTGCACACAGCTCTGCGTGCCCCTGCTGACAAAGTTATTAATGTCGA TGGCAATAATATTGTCGCCGAAGTTCAGCAGACATTGGCAAAAATGGGTGAGTTCGTCGAGTCGCTGACTTCTGGTCAGT GGAAAGGTTATACAGGTAAAACCATTACTGATGTGGTAAGCATAGGTATTGGAGGTTCCTTCTTAGGCCCAAAAATCGTT TCTCAAGCCCTGCGTCCTTATTGGACAGGTGAGCTAAATTGTCACTTTGTGGCAAACGTGGACGGTACTTCTATCACTGA AAAACTTAAAGGGCTCGATCCACAAACCACCCTGTTTGTGATGTCTTCTAAGTCTTTCGGTACCCAAGAAACCTTAACCA ATACGCTAACCGCAAAAGAGTGGTTTTTAAGCCAAGGTGCATCACAGTCTGATGTGGCAAAGCATTTTGTCGCCGTGAGC TCGAACGTCTCTAAAGCTACTGAGTTTGGTATCGATGCTAACAACATCTTCCCAATGTGGGATTGGGTCGGTGGACGTTA CTCATTATGGTCTGCTATTGGCTTACCTATCGCCCTGCTAATCGGTATGGATAACTTCCGTCAATTATTGGCTGGCGCTC ATGAGATGGATGAACATTTTGCCAATACCCCATTAGAGAGCAATATGCCGGTGATTATGGGTATGTTCTCGCTTTGGTAT GGCAACTTTTTCAATGCACAGTCTCATGTCGTGCTTACCTATGATCATTACCTGAGAGGTCTACCAGCTTACTTCCAACA ACTCGATATGGAAAGTAATGGTAAATCTGTCACCCTAAACGGTACTGATGTTGATTACAGCACTGGCCCGATTATTTGGG GAGGTGAAGGCACCAATGGCCAGCATGCATACCACCAGCTACTGCATCAAGGTACAGCGCTTATCCCGGCTGACTTTATT ATGCCGCTAAATAGCCACAACCCAGTGGGTGAGCATCATGTACAACTTGCTTCAAATTGCTTCGGACAAACCCAAGCATT GATGCAGGGCAGAACATTCGATGAGGCATTAGCTGAGCTTAACCAAAGTGGATTAGCTGAGGAGCAGAAGCTGCTTATCG CTAAGCATAAGGTGATGCCAGGTAATAAGCCAAGCAATACTATTTTGATGGATAAGCTAACACCGTCGACCTTAGGTTCA CTTATTGCCCTTTACGAGCACAGAACCTTTGTTCAAGGCGCTATCTGGCAGATAAACTCTTTCGACCAGTGGGGTGTAGA GCTAGGTAAACAACTCGGTAATGATGTACTAGAACGTCTGGTCGCTGATACTGAAGCCAAAGAGCTCGACTCATCGAGCA ATGGTTTAATTAACCTGTTTAAGCAGGGCAAAATTTAA
Upstream 100 bases:
>100_bases AGAAGCTAGCCGAAGGTATTCGCAACTTCGCTATCGACCAGGGTAAGCTCGAAGTTATGCTAAAAGAAAAGCTTTCGTCT TAACGGAATAGGACAAGACT
Downstream 100 bases:
>100_bases TACTGCTCAGCACACGGCTTTCCATGCCTAACAAAAAAAGCCAGTTTCTACTGGCTTTTTTGTTTTTCACTAGCTAATAC CAATCAGTATAAGAAGTTGA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTELTQQASWQALEKHSKSLPHMRELFSTEPERFGNMSTQACGLFLDYSKNRASQETMSLLFNLAKDSQLESKIKAMFAG HVINNTEQRAVLHTALRAPADKVINVDGNNIVAEVQQTLAKMGEFVESLTSGQWKGYTGKTITDVVSIGIGGSFLGPKIV SQALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKEWFLSQGASQSDVAKHFVAVS SNVSKATEFGIDANNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRQLLAGAHEMDEHFANTPLESNMPVIMGMFSLWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPIIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLNSHNPVGEHHVQLASNCFGQTQALMQGRTFDEALAELNQSGLAEEQKLLIAKHKVMPGNKPSNTILMDKLTPSTLGS LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLERLVADTEAKELDSSSNGLINLFKQGKI
Sequences:
>Translated_545_residues MTELTQQASWQALEKHSKSLPHMRELFSTEPERFGNMSTQACGLFLDYSKNRASQETMSLLFNLAKDSQLESKIKAMFAG HVINNTEQRAVLHTALRAPADKVINVDGNNIVAEVQQTLAKMGEFVESLTSGQWKGYTGKTITDVVSIGIGGSFLGPKIV SQALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKEWFLSQGASQSDVAKHFVAVS SNVSKATEFGIDANNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRQLLAGAHEMDEHFANTPLESNMPVIMGMFSLWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPIIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLNSHNPVGEHHVQLASNCFGQTQALMQGRTFDEALAELNQSGLAEEQKLLIAKHKVMPGNKPSNTILMDKLTPSTLGS LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLERLVADTEAKELDSSSNGLINLFKQGKI >Mature_544_residues TELTQQASWQALEKHSKSLPHMRELFSTEPERFGNMSTQACGLFLDYSKNRASQETMSLLFNLAKDSQLESKIKAMFAGH VINNTEQRAVLHTALRAPADKVINVDGNNIVAEVQQTLAKMGEFVESLTSGQWKGYTGKTITDVVSIGIGGSFLGPKIVS QALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKEWFLSQGASQSDVAKHFVAVSS NVSKATEFGIDANNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRQLLAGAHEMDEHFANTPLESNMPVIMGMFSLWYG NFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPIIWGGEGTNGQHAYHQLLHQGTALIPADFIM PLNSHNPVGEHHVQLASNCFGQTQALMQGRTFDEALAELNQSGLAEEQKLLIAKHKVMPGNKPSNTILMDKLTPSTLGSL IALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLERLVADTEAKELDSSSNGLINLFKQGKI
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=553, Percent_Identity=50.994575045208, Blast_Score=584, Evalue=1e-167, Organism=Homo sapiens, GI296080693, Length=553, Percent_Identity=47.1971066907776, Blast_Score=526, Evalue=1e-149, Organism=Escherichia coli, GI1790457, Length=540, Percent_Identity=53.3333333333333, Blast_Score=594, Evalue=1e-171, Organism=Caenorhabditis elegans, GI71996708, Length=547, Percent_Identity=52.8336380255942, Blast_Score=579, Evalue=1e-165, Organism=Caenorhabditis elegans, GI71996703, Length=547, Percent_Identity=52.8336380255942, Blast_Score=578, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6319673, Length=550, Percent_Identity=50.1818181818182, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI24651916, Length=551, Percent_Identity=53.3575317604356, Blast_Score=581, Evalue=1e-166, Organism=Drosophila melanogaster, GI24651914, Length=551, Percent_Identity=53.3575317604356, Blast_Score=581, Evalue=1e-166, Organism=Drosophila melanogaster, GI17737445, Length=551, Percent_Identity=53.3575317604356, Blast_Score=581, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 60057; Mature: 59926
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTQQASWQALEKHSKSLPHMRELFSTEPERFGNMSTQACGLFLDYSKNRASQETMSL CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHEEEEECCCCCCHHHHHHH LFNLAKDSQLESKIKAMFAGHVINNTEQRAVLHTALRAPADKVINVDGNNIVAEVQQTLA HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH KMGEFVESLTSGQWKGYTGKTITDVVSIGIGGSFLGPKIVSQALRPYWTGELNCHFVANV HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC DGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKEWFLSQGASQSDVAKHFVAVS CCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC SNVSKATEFGIDANNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRQLLAGAHEMDEHF CCHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ANTPLESNMPVIMGMFSLWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEC GTDVDYSTGPIIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLNSHNPVGEHHVQLASNC CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHH FGQTQALMQGRTFDEALAELNQSGLAEEQKLLIAKHKVMPGNKPSNTILMDKLTPSTLGS HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLERLVADTEAKELDSSSNGLINLF HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHH KQGKI CCCCC >Mature Secondary Structure TELTQQASWQALEKHSKSLPHMRELFSTEPERFGNMSTQACGLFLDYSKNRASQETMSL CCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHEEEEECCCCCCHHHHHHH LFNLAKDSQLESKIKAMFAGHVINNTEQRAVLHTALRAPADKVINVDGNNIVAEVQQTLA HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH KMGEFVESLTSGQWKGYTGKTITDVVSIGIGGSFLGPKIVSQALRPYWTGELNCHFVANV HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC DGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKEWFLSQGASQSDVAKHFVAVS CCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC SNVSKATEFGIDANNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRQLLAGAHEMDEHF CCHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ANTPLESNMPVIMGMFSLWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEC GTDVDYSTGPIIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLNSHNPVGEHHVQLASNC CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHH FGQTQALMQGRTFDEALAELNQSGLAEEQKLLIAKHKVMPGNKPSNTILMDKLTPSTLGS HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLERLVADTEAKELDSSSNGLINLF HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHH KQGKI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA