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The map label for this gene is 157960890

Identifier: 157960890

GI number: 157960890

Start: 1286241

End: 1286702

Strand: Reverse

Name: 157960890

Synonym: Spea_1062

Alternate gene names: NA

Gene position: 1286702-1286241 (Counterclockwise)

Preceding gene: 157960892

Following gene: 157960888

Centisome position: 24.87

GC content: 40.04

Gene sequence:

>462_bases
ATGAAAAAAATTGCAAAGATGAGCCTTATAGCACTAGCAGCAACTGCAACGTTCGCAACAAGTGTTTACGCAAATAATTT
TAAAGAAGCTGAAGATGCTGTCCATTACCGTCAATCTGCTTTTAGCATGATTGCTTATAACTTTGGTGACATGGGCGCCA
TGTTAAAAGGTAAGAAAGAATACAATGCTGAAGTATTTGCTATGCGTGCAGAAAATGTGGCTGCGCTGTCAAAGCTTCCT
CTTGAAGGCTTTATTGCTGGTTCTGATAAAGGTGATACTGAAGCCTTGGCAAAAATCTGGAGCGACAAAGCTGACTTCGA
TAACAAGATGAAAACTTTCCAAGACAATGCAGCCATTTTAGCGACTGTTGCTAGCAAAGGGGATAAGAAAGAGATTAAGA
AAGCCTTTGGTAATACAGGTAAGAGCTGTAAAGGCTGCCATGACGTTTACAAGAAAGACTAA

Upstream 100 bases:

>100_bases
AAGAGTAACGATCGTAAAAAACGATTAGTGTCAGCAGGATAAAACTCTATACAATGGCAAAAGCAAGATCACATAACACA
ATAAAAACGTGAGAATCACC

Downstream 100 bases:

>100_bases
TTCTGACTTGTCAGTTTTTTAAATTAAAAAAGCCTGTTAAACAACAGGCTTTTTTATTGGCTAACCAAATATACTTAGTT
TATAAACGGTGCTGAGCCCT

Product: cytochrome c class II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKKIAKMSLIALAATATFATSVYANNFKEAEDAVHYRQSAFSMIAYNFGDMGAMLKGKKEYNAEVFAMRAENVAALSKLP
LEGFIAGSDKGDTEALAKIWSDKADFDNKMKTFQDNAAILATVASKGDKKEIKKAFGNTGKSCKGCHDVYKKD

Sequences:

>Translated_153_residues
MKKIAKMSLIALAATATFATSVYANNFKEAEDAVHYRQSAFSMIAYNFGDMGAMLKGKKEYNAEVFAMRAENVAALSKLP
LEGFIAGSDKGDTEALAKIWSDKADFDNKMKTFQDNAAILATVASKGDKKEIKKAFGNTGKSCKGCHDVYKKD
>Mature_153_residues
MKKIAKMSLIALAATATFATSVYANNFKEAEDAVHYRQSAFSMIAYNFGDMGAMLKGKKEYNAEVFAMRAENVAALSKLP
LEGFIAGSDKGDTEALAKIWSDKADFDNKMKTFQDNAAILATVASKGDKKEIKKAFGNTGKSCKGCHDVYKKD

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 16643; Mature: 16643

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAKMSLIALAATATFATSVYANNFKEAEDAVHYRQSAFSMIAYNFGDMGAMLKGKKE
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHH
YNAEVFAMRAENVAALSKLPLEGFIAGSDKGDTEALAKIWSDKADFDNKMKTFQDNAAIL
CCCEEEEEEHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHE
ATVASKGDKKEIKKAFGNTGKSCKGCHDVYKKD
EHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKKIAKMSLIALAATATFATSVYANNFKEAEDAVHYRQSAFSMIAYNFGDMGAMLKGKKE
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHH
YNAEVFAMRAENVAALSKLPLEGFIAGSDKGDTEALAKIWSDKADFDNKMKTFQDNAAIL
CCCEEEEEEHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHE
ATVASKGDKKEIKKAFGNTGKSCKGCHDVYKKD
EHHHCCCCHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6273892; 2829828 [H]