| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960892
Identifier: 157960892
GI number: 157960892
Start: 1287235
End: 1287639
Strand: Reverse
Name: 157960892
Synonym: Spea_1064
Alternate gene names: NA
Gene position: 1287639-1287235 (Counterclockwise)
Preceding gene: 157960893
Following gene: 157960890
Centisome position: 24.88
GC content: 43.7
Gene sequence:
>405_bases ATGTTATCTAAACCTGTATACGAAGCCCTGCCCTACACATATTTAGCTCTCGGTAGCATAAGTGTCATGATGCTTGAGCA AACCTATGCCCAAGCGTTCTCAATTCTATTATTTCTCATGGGCAGTAGAGTCTATGCATTACGCTCCCAAAACCGCCGTA CTGACTCGAAAAGGCGCAGAAAAGAAGGTAGATTACCTGCATTTATCTACGAGCACACGCCGTATTTATATGTGTTAACA GCTTTACTGCTGTTGAAGCTCGATTCTAAACTGGCTCCCGTGCTTAGCATCATCTTGTTTAGCTATGCTCTGTATATCTT TGCTCGGCGCTCTATGAACCGCAAGCACACAACCGTCACTTCACAACTGCTAAATGATATCGCCAACACCAATACACGAT ATTGA
Upstream 100 bases:
>100_bases GCGGGCTTTTTTTTGGTCTACACTGCAGCCGTTAGCTATCAATGCTAATGACTAGAAGTTTACAACGGATCTAAGCCAGA TTTTTGCAAAGGAACTGCAA
Downstream 100 bases:
>100_bases GCATAAGTAACCTAAAGCAGAGCTGTTAATCTTTATAATATTAACAGCTTAACGTTTTCTCTTTGCTGCAAACTCATGTG TTTTAGATAATTGGAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLSKPVYEALPYTYLALGSISVMMLEQTYAQAFSILLFLMGSRVYALRSQNRRTDSKRRRKEGRLPAFIYEHTPYLYVLT ALLLLKLDSKLAPVLSIILFSYALYIFARRSMNRKHTTVTSQLLNDIANTNTRY
Sequences:
>Translated_134_residues MLSKPVYEALPYTYLALGSISVMMLEQTYAQAFSILLFLMGSRVYALRSQNRRTDSKRRRKEGRLPAFIYEHTPYLYVLT ALLLLKLDSKLAPVLSIILFSYALYIFARRSMNRKHTTVTSQLLNDIANTNTRY >Mature_134_residues MLSKPVYEALPYTYLALGSISVMMLEQTYAQAFSILLFLMGSRVYALRSQNRRTDSKRRRKEGRLPAFIYEHTPYLYVLT ALLLLKLDSKLAPVLSIILFSYALYIFARRSMNRKHTTVTSQLLNDIANTNTRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15552; Mature: 15552
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKPVYEALPYTYLALGSISVMMLEQTYAQAFSILLFLMGSRVYALRSQNRRTDSKRRR CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH KEGRLPAFIYEHTPYLYVLTALLLLKLDSKLAPVLSIILFSYALYIFARRSMNRKHTTVT HHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SQLLNDIANTNTRY HHHHHHHHCCCCCC >Mature Secondary Structure MLSKPVYEALPYTYLALGSISVMMLEQTYAQAFSILLFLMGSRVYALRSQNRRTDSKRRR CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH KEGRLPAFIYEHTPYLYVLTALLLLKLDSKLAPVLSIILFSYALYIFARRSMNRKHTTVT HHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SQLLNDIANTNTRY HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA