| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yacL [C]
Identifier: 157960656
GI number: 157960656
Start: 1027702
End: 1028073
Strand: Direct
Name: yacL [C]
Synonym: Spea_0828
Alternate gene names: 157960656
Gene position: 1027702-1028073 (Clockwise)
Preceding gene: 157960655
Following gene: 157960659
Centisome position: 19.86
GC content: 40.86
Gene sequence:
>372_bases ATGGAATACGATTTTTTACGTAATACGATTACCGATACTGTGTTTGCCCGCTTTAGTATGGATCATGAGGCATTAGGTTT TTGGTTGTCAGAAGAGCTTGCCGATAATAGCGAACTTTATGTTGAGATCTGTCAGCAGATCGAGCGATTACAAAATGGCC AAGGTAATGAGTGGCGTTTGGTAGGCAAAGCGTTATCGCTTGAATTGGATAGTGAGCAAGCCCGGATCTTTGCCAATGAC ATCGAAGATAACGATGATCAAGAATTGGATGAATCTATGTCATTTTATGACGGTGAGTCAGAAGCCTTTTGCGGATTAGA AGACTTTTATGAGGTGATTGTGAACTGGCGTCGTTTCTTAGATGAAAATTGA
Upstream 100 bases:
>100_bases CGGATACTTGTGACACTTTATCTTGTGCGAATTGGCGCAAGCATAGAGTTATTGGGTTAAAATGACTTTTAGAAGTGATA TTTAATTTTTGAGTCCAATT
Downstream 100 bases:
>100_bases TTGCCGATCCTCAGATTTATTTCTGTCCAAATAGGTACAAAAAAAGCAGCCATTGGCTGCTTTTTTGTTTGAAAAGGTGC GTTACTGATTTAGGTAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN
Sequences:
>Translated_123_residues MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN >Mature_123_residues MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRLVGKALSLELDSEQARIFAND IEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFLDEN
Specific function: Unknown
COG id: COG3112
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0231 family [H]
Homologues:
Organism=Escherichia coli, GI87081687, Length=123, Percent_Identity=38.2113821138211, Blast_Score=85, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008249 - ProDom: PD020773 [H]
Pfam domain/function: PF06062 UPF0231 [H]
EC number: NA
Molecular weight: Translated: 14500; Mature: 14500
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE VGKALSLELDSEQARIFANDIEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFL EEHHHEEEECCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH DEN CCC >Mature Secondary Structure MEYDFLRNTITDTVFARFSMDHEALGFWLSEELADNSELYVEICQQIERLQNGQGNEWRL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE VGKALSLELDSEQARIFANDIEDNDDQELDESMSFYDGESEAFCGLEDFYEVIVNWRRFL EEHHHEEEECCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH DEN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA