| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960649
Identifier: 157960649
GI number: 157960649
Start: 1019275
End: 1019835
Strand: Direct
Name: 157960649
Synonym: Spea_0821
Alternate gene names: NA
Gene position: 1019275-1019835 (Clockwise)
Preceding gene: 157960648
Following gene: 157960655
Centisome position: 19.7
GC content: 44.56
Gene sequence:
>561_bases ATGTCAGAGAAACGCTTTATTACCGCACAAGAGCTGCTAGAGGATTCATTTCGTTTAGCGGCGCAAGTTTATGAAAGTGG CTTCCGTCCACAGTTTATCGTGGGGATTTGGCGTGGTGGTGCTCCAATCGGTATCGCGGTACAGGAGTTTTTTGACTTTA AGAAAGTTGAGACTGACCACATCGCAGTACGTACCTCGTCTTACTATGGCATCAACAAGCAAAGCAAGCAGATCAAGGTT CATGGGCTACATTACATCGTAGAAAACGCTAATGCCGGTGATGGTCTACTGATTGTCGATGACGTGTTTGATTCAGGTCG CAGTATCCATGCGTTGATGGAAAACTTAAGCGACTTGATGCGCTTGAATATGCCAAAAGATGTGCGTATTGCTTGCCCAT ACTACAAGCCACAAAATACCGCAGTGCCATTAAAGCCAGACTACTTCATTCATGAATCTGATGAATGGTTAGTGTTCCCA CACGAAGTCTCAGGTTTGTCTGCAGAAGAACTTGCCGAAGGCAAAGGCGACTTGAAGAACATTAAAGATCTGTTTGTTTA A
Upstream 100 bases:
>100_bases AGTGCTAACTTGAGTAGAGCGAGTTCAGTTAGCGTTTAATTACAGCTGAGATTGCGATAGGACTTAATTCAGATATTAAT AACAAGATGGGGACGGTCAG
Downstream 100 bases:
>100_bases GCCTTATAGCGCTTGAATTCGCAGCTAAAAGCCACCGCAAGGTGGCTTTTTTGTTTTAAAAAAAGGGCCTAGGACCTAGG ACGCTCTGCTGCTAGAGCGG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: Hypoxanthine-Guanine Phosphoribosyltransferase; Hypoxanthine Phosphoribosyltransferase; Phosphoribosyl Transferase Domain Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSEKRFITAQELLEDSFRLAAQVYESGFRPQFIVGIWRGGAPIGIAVQEFFDFKKVETDHIAVRTSSYYGINKQSKQIKV HGLHYIVENANAGDGLLIVDDVFDSGRSIHALMENLSDLMRLNMPKDVRIACPYYKPQNTAVPLKPDYFIHESDEWLVFP HEVSGLSAEELAEGKGDLKNIKDLFV
Sequences:
>Translated_186_residues MSEKRFITAQELLEDSFRLAAQVYESGFRPQFIVGIWRGGAPIGIAVQEFFDFKKVETDHIAVRTSSYYGINKQSKQIKV HGLHYIVENANAGDGLLIVDDVFDSGRSIHALMENLSDLMRLNMPKDVRIACPYYKPQNTAVPLKPDYFIHESDEWLVFP HEVSGLSAEELAEGKGDLKNIKDLFV >Mature_185_residues SEKRFITAQELLEDSFRLAAQVYESGFRPQFIVGIWRGGAPIGIAVQEFFDFKKVETDHIAVRTSSYYGINKQSKQIKVH GLHYIVENANAGDGLLIVDDVFDSGRSIHALMENLSDLMRLNMPKDVRIACPYYKPQNTAVPLKPDYFIHESDEWLVFPH EVSGLSAEELAEGKGDLKNIKDLFV
Specific function: Unknown
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21064; Mature: 20933
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKRFITAQELLEDSFRLAAQVYESGFRPQFIVGIWRGGAPIGIAVQEFFDFKKVETDH CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCE IAVRTSSYYGINKQSKQIKVHGLHYIVENANAGDGLLIVDDVFDSGRSIHALMENLSDLM EEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RLNMPKDVRIACPYYKPQNTAVPLKPDYFIHESDEWLVFPHEVSGLSAEELAEGKGDLKN HCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHCCCCCHHH IKDLFV HHHHCC >Mature Secondary Structure SEKRFITAQELLEDSFRLAAQVYESGFRPQFIVGIWRGGAPIGIAVQEFFDFKKVETDH CCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCE IAVRTSSYYGINKQSKQIKVHGLHYIVENANAGDGLLIVDDVFDSGRSIHALMENLSDLM EEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RLNMPKDVRIACPYYKPQNTAVPLKPDYFIHESDEWLVFPHEVSGLSAEELAEGKGDLKN HCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHCCCCCHHH IKDLFV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA