| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pld [H]
Identifier: 157960648
GI number: 157960648
Start: 1016981
End: 1018750
Strand: Direct
Name: pld [H]
Synonym: Spea_0820
Alternate gene names: 157960648
Gene position: 1016981-1018750 (Clockwise)
Preceding gene: 157960646
Following gene: 157960649
Centisome position: 19.65
GC content: 51.19
Gene sequence:
>1770_bases ATGAAACGACCTTTTACTCGAAGAGACTTTTTGGCAATGTCGGCAAAGGGGGTTGGCGCTGCCGTTGTATCCTACGGCCT GATGGGCTGTAGTAGTGACGATGACGACAATAATGGCATTTATGCCGAATTCCTCCACGGCCTTGCTAGTGGCGACCCAA GCCATGACGCGGTGATACTTTGGACCCGTGTCACCCCTAAGCGTGATGGCGAGATCAAGGTGTCGTGGGAGGTGGCGACC GATGCTGCATTTACCCAGTTAGTGAGTAATGGCGAGACCATGACAAGCGGTGATAGAGACTATACGGTTAAGGTTGATGC CACAGGGCTTGAGGCGGGTCGCCAGTATTTTTACCGCTTCAAGACGGGTAATAAAACCTCGCAGCCGGCAATGACTAAAA CCTTGCCACAGGGCGCCATCGATAGCGCTAAGTTTGCCGTGGTGTCATGCGCTAACTTCCCTGCAGGATATTTTAATGTC TACGAGATGGCATCAAGAATGGACGATCTCGATGCGGTCATCCACTTAGGCGATTACATCTATGAGTATGCACGGGGTGA GTACGCCAGCGAGCGCGCCGAAGAGCTTGGGCGTGAAGTCTTGCCCGAAGGTGAGTTGATGAGTCTATCTGATTATCGTA CCCGTTACGGTCAATATCGCAGTGATATCAGTTTGCAGAAGTTGCACGGTAAAACGCCATTTATTACCGTATGGGATGAT CATGAAGTGGCCAATGACAGTTGGCGTGATGGCGCTGAGAATCACAACGAGGGTGAAGGGGATTTCGATGCCCGCAAAGA GGCCGCGTTGCAGGCTTACTTCGAATGGCTGCCTATCCGACCATGGAGAGAAGGCAATCATGAAGAGATCTATCGCTCGT TCAATTTTGGTGACTTAGTTGACCTGCATATGCTTGATACACGACTCCTAGGCCGAGATAAGCCACTGGATTACGCCGAG TATATGGATCCTGCTACGGGGGGCTTAGATAGCGCACGCTTTATGGCGGACATTACCGACACCAACAGAACCATGCTTGG GCAAGATCAACAAGCTTGGCTGCAAACGGCGTTACTGACTTCGACGGCGACTTGGCAGGTATTGGGGCAGCAGGTATTGA TGGGGCAGATGATGCTACCTGCAGCCATTGCGACTCAACAACTGTCGATCCCTGAGTTTGGCCAGTTGGCGGCGTTAGCA CAATTTGCTGCCCGAAAAGCGGCGGGCGACCCAACGCTGACCGCAGATGAGCTTAAGTACCTATCTTTCTACGGGCATAA GTTGACGCCTGAGGCGATGGCTCTGCTGCAGTTGCCTTCTATTCCTTACAACCTCGACTCCTGGGATGGTTACGCCTACG AGCGAGAGGTGATTCTAGCGACGGCAAAATCACAGACAAAAAATCTAGTGGTGATTGCAGGAGACACCCATAATGCTTGG GCTAATGAACTAAAAGACGCCGCCGGTGACGCTGTGGGAGTCGAGTTTGCGACTAGCTCGGTATCATCACCGGGGCTTGA GTATTACTTAGGCATAGAAGAGAAAGATATTGCCGCAACCGAGGCGGCGATTGTCGATTTAGTCGATAACCTTGCCTATA CCAACTTGATGAATCGAGGATTGATGACGCTCACCTTCACTCACGAAGAGGTTCGTACTGACTGGCGTTACGTCGATACA ATTTATTCTCGTGACTTTACAGAAGATAGCGAGAGAAACTTCTCAATGGTTACCAAAGCGGGCAGTCATGGGCTTATAGC GGCAAGTTAG
Upstream 100 bases:
>100_bases GTTTACATTTCTGTCTTTTTCGTGTCATGGTGGTGCTTTAGTATCCAAACTGATTAGACCTCGTACCACGCAAGAACGTA ATATTAAAGGAATAATAACA
Downstream 100 bases:
>100_bases TACTTGCTAGGCTATCAATTAACCTATCCATTCTCTGGTCTATTTATTTGGTTACTAACTTGGTTATTAACCAAATTAGT AACTAACAGGCTAAAGAGTG
Product: alkaline phosphatase
Products: NA
Alternate protein names: PLD [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT IYSRDFTEDSERNFSMVTKAGSHGLIAAS
Sequences:
>Translated_589_residues MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT IYSRDFTEDSERNFSMVTKAGSHGLIAAS >Mature_589_residues MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT IYSRDFTEDSERNFSMVTKAGSHGLIAAS
Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhoD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018946 - InterPro: IPR006311 [H]
Pfam domain/function: PF09423 PhoD [H]
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 65459; Mature: 65459
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVIL CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE WTRVTPKRDGEIKVSWEVATDAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRF EEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHCCEEEEEE KTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYI ECCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECC HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEE DLHMLDTRLLGRDKPLDYAEYMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLT HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH STATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTADELKY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCCEEEEECCCCCHH ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRG HHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LMTLTFTHEEVRTDWRYVDTIYSRDFTEDSERNFSMVTKAGSHGLIAAS CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVIL CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE WTRVTPKRDGEIKVSWEVATDAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRF EEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHCCEEEEEE KTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYI ECCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECC HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEE DLHMLDTRLLGRDKPLDYAEYMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLT HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH STATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTADELKY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH LSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCCEEEEECCCCCHH ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRG HHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LMTLTFTHEEVRTDWRYVDTIYSRDFTEDSERNFSMVTKAGSHGLIAAS CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12441393 [H]