Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is pld [H]

Identifier: 157960648

GI number: 157960648

Start: 1016981

End: 1018750

Strand: Direct

Name: pld [H]

Synonym: Spea_0820

Alternate gene names: 157960648

Gene position: 1016981-1018750 (Clockwise)

Preceding gene: 157960646

Following gene: 157960649

Centisome position: 19.65

GC content: 51.19

Gene sequence:

>1770_bases
ATGAAACGACCTTTTACTCGAAGAGACTTTTTGGCAATGTCGGCAAAGGGGGTTGGCGCTGCCGTTGTATCCTACGGCCT
GATGGGCTGTAGTAGTGACGATGACGACAATAATGGCATTTATGCCGAATTCCTCCACGGCCTTGCTAGTGGCGACCCAA
GCCATGACGCGGTGATACTTTGGACCCGTGTCACCCCTAAGCGTGATGGCGAGATCAAGGTGTCGTGGGAGGTGGCGACC
GATGCTGCATTTACCCAGTTAGTGAGTAATGGCGAGACCATGACAAGCGGTGATAGAGACTATACGGTTAAGGTTGATGC
CACAGGGCTTGAGGCGGGTCGCCAGTATTTTTACCGCTTCAAGACGGGTAATAAAACCTCGCAGCCGGCAATGACTAAAA
CCTTGCCACAGGGCGCCATCGATAGCGCTAAGTTTGCCGTGGTGTCATGCGCTAACTTCCCTGCAGGATATTTTAATGTC
TACGAGATGGCATCAAGAATGGACGATCTCGATGCGGTCATCCACTTAGGCGATTACATCTATGAGTATGCACGGGGTGA
GTACGCCAGCGAGCGCGCCGAAGAGCTTGGGCGTGAAGTCTTGCCCGAAGGTGAGTTGATGAGTCTATCTGATTATCGTA
CCCGTTACGGTCAATATCGCAGTGATATCAGTTTGCAGAAGTTGCACGGTAAAACGCCATTTATTACCGTATGGGATGAT
CATGAAGTGGCCAATGACAGTTGGCGTGATGGCGCTGAGAATCACAACGAGGGTGAAGGGGATTTCGATGCCCGCAAAGA
GGCCGCGTTGCAGGCTTACTTCGAATGGCTGCCTATCCGACCATGGAGAGAAGGCAATCATGAAGAGATCTATCGCTCGT
TCAATTTTGGTGACTTAGTTGACCTGCATATGCTTGATACACGACTCCTAGGCCGAGATAAGCCACTGGATTACGCCGAG
TATATGGATCCTGCTACGGGGGGCTTAGATAGCGCACGCTTTATGGCGGACATTACCGACACCAACAGAACCATGCTTGG
GCAAGATCAACAAGCTTGGCTGCAAACGGCGTTACTGACTTCGACGGCGACTTGGCAGGTATTGGGGCAGCAGGTATTGA
TGGGGCAGATGATGCTACCTGCAGCCATTGCGACTCAACAACTGTCGATCCCTGAGTTTGGCCAGTTGGCGGCGTTAGCA
CAATTTGCTGCCCGAAAAGCGGCGGGCGACCCAACGCTGACCGCAGATGAGCTTAAGTACCTATCTTTCTACGGGCATAA
GTTGACGCCTGAGGCGATGGCTCTGCTGCAGTTGCCTTCTATTCCTTACAACCTCGACTCCTGGGATGGTTACGCCTACG
AGCGAGAGGTGATTCTAGCGACGGCAAAATCACAGACAAAAAATCTAGTGGTGATTGCAGGAGACACCCATAATGCTTGG
GCTAATGAACTAAAAGACGCCGCCGGTGACGCTGTGGGAGTCGAGTTTGCGACTAGCTCGGTATCATCACCGGGGCTTGA
GTATTACTTAGGCATAGAAGAGAAAGATATTGCCGCAACCGAGGCGGCGATTGTCGATTTAGTCGATAACCTTGCCTATA
CCAACTTGATGAATCGAGGATTGATGACGCTCACCTTCACTCACGAAGAGGTTCGTACTGACTGGCGTTACGTCGATACA
ATTTATTCTCGTGACTTTACAGAAGATAGCGAGAGAAACTTCTCAATGGTTACCAAAGCGGGCAGTCATGGGCTTATAGC
GGCAAGTTAG

Upstream 100 bases:

>100_bases
GTTTACATTTCTGTCTTTTTCGTGTCATGGTGGTGCTTTAGTATCCAAACTGATTAGACCTCGTACCACGCAAGAACGTA
ATATTAAAGGAATAATAACA

Downstream 100 bases:

>100_bases
TACTTGCTAGGCTATCAATTAACCTATCCATTCTCTGGTCTATTTATTTGGTTACTAACTTGGTTATTAACCAAATTAGT
AACTAACAGGCTAAAGAGTG

Product: alkaline phosphatase

Products: NA

Alternate protein names: PLD [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT
DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV
YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD
HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE
YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA
QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW
ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT
IYSRDFTEDSERNFSMVTKAGSHGLIAAS

Sequences:

>Translated_589_residues
MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT
DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV
YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD
HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE
YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA
QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW
ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT
IYSRDFTEDSERNFSMVTKAGSHGLIAAS
>Mature_589_residues
MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGEIKVSWEVAT
DAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRFKTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNV
YEMASRMDDLDAVIHLGDYIYEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD
HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLVDLHMLDTRLLGRDKPLDYAE
YMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLTSTATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALA
QFAARKAAGDPTLTADELKYLSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW
ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRGLMTLTFTHEEVRTDWRYVDT
IYSRDFTEDSERNFSMVTKAGSHGLIAAS

Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 65459; Mature: 65459

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVIL
CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
WTRVTPKRDGEIKVSWEVATDAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRF
EEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHCCEEEEEE
KTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYI
ECCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD
HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECC
HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEE
DLHMLDTRLLGRDKPLDYAEYMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLT
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH
STATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTADELKY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW
HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCCEEEEECCCCCHH
ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRG
HHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LMTLTFTHEEVRTDWRYVDTIYSRDFTEDSERNFSMVTKAGSHGLIAAS
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC
>Mature Secondary Structure
MKRPFTRRDFLAMSAKGVGAAVVSYGLMGCSSDDDDNNGIYAEFLHGLASGDPSHDAVIL
CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
WTRVTPKRDGEIKVSWEVATDAAFTQLVSNGETMTSGDRDYTVKVDATGLEAGRQYFYRF
EEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHCCEEEEEE
KTGNKTSQPAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYI
ECCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YEYARGEYASERAEELGREVLPEGELMSLSDYRTRYGQYRSDISLQKLHGKTPFITVWDD
HHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECC
HEVANDSWRDGAENHNEGEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFNFGDLV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEE
DLHMLDTRLLGRDKPLDYAEYMDPATGGLDSARFMADITDTNRTMLGQDQQAWLQTALLT
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH
STATWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTADELKY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LSFYGHKLTPEAMALLQLPSIPYNLDSWDGYAYEREVILATAKSQTKNLVVIAGDTHNAW
HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEECCCCCCCEEEEECCCCCHH
ANELKDAAGDAVGVEFATSSVSSPGLEYYLGIEEKDIAATEAAIVDLVDNLAYTNLMNRG
HHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
LMTLTFTHEEVRTDWRYVDTIYSRDFTEDSERNFSMVTKAGSHGLIAAS
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12441393 [H]