| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pgk [H]
Identifier: 157960618
GI number: 157960618
Start: 977642
End: 978817
Strand: Direct
Name: pgk [H]
Synonym: Spea_0790
Alternate gene names: 157960618
Gene position: 977642-978817 (Clockwise)
Preceding gene: 157960617
Following gene: 157960619
Centisome position: 18.89
GC content: 50.17
Gene sequence:
>1176_bases ATGACGATTCTTAATATGAAAGATTTAGACCTTCAAGGTAAGCGTGTGCTTATTCGTGAAGATCTTAACGTACCAGTCAG CGATGGTGTGGTAACCAGTGACGCGCGTCTGCGTGCTTCTCTACCAACGATTAAGCTTGCGCTTGAAAAAGGTGCGGCGG TTATGGTGATGTCTCACCTAGGCCGTCCAACTGAAGGCGAGTTCAATGCTGAGTTCTCTATGCAGCCTGTAGTTGATTAC CTAACAAAGGCGCTAGATTGCCCTGTACGCCTAGCAGCAGACTACCTAGACGGCATCGAAGTGGCTGTCGGTGAAGTGGT AGTGTTTGAAAACGTGCGTTTTAACTTGGGTGAGAAGAAGAACGACGAAGCGCTGGCTAAGAAGATGGCGGCACTTTGTG ACGTATACGTGATGGATGCATTCGGCACGGCTCACCGCGCACAAGCATCGACTCACGGTGTTGGTCTGCACGCGCCTATC GCTTGTGCGGGTCCATTGTTAGCGGGTGAGTTAGAAGCCTTAGGTAAGGCTCTTGATAACCCAGCACGCCCAATGGTAGC CATTGTTGGTGGTTCTAAAGTTTCAACAAAACTGACAGTGCTTGAAAGCCTTTCAACTAAAGTTGACCAACTTGTAGTGG GTGGCGGCATCGCCAACACTTTCGTTGCTGCAGCAGGCCACAAGGTGGGTAAGTCGCTTTATGAGGCCGACCTGATTGAA GAAGCTCAACGCCTTGTTGCTAATGCGCAGAGCCGTGGTGGTGACATTCCAGTACCTACTGATGTGGTTGTTGCAGGCGA GTTCAGCCCTACCGCAACTGCAACGCTGAAAGATGTAAGCGATGTATCTGACACAGATATGATTTTCGATATCGGCCCAG ATAGCGCCGAAGCTTTAGCCGAGATCATCAAAAATGCTGGCACGGTTGTATGGAACGGTCCAGTCGGTGTATTTGAGTTT GATCAGTTCGGTGAAGGGACTAAGCGTATTGCTCAAGCAATTGCCGAGTCAAATGCCTTCTCTATCGCTGGCGGTGGTGA CACATTAGCGGCTGTCGATAAGTATGGTATCGCCGACAAGGTGTCTTATATCTCAACGGGTGGCGGCGCTTTCCTAGAGT TTTTAGAAGGAAAAGAGTTGCCAGCAGTTGCCATGCTTGAGAGCCGCGGCCAGTAA
Upstream 100 bases:
>100_bases GTGTTGTGTCCCGGTGGTCGGGTAATATCGTTTTATTGAATTTTGCTCAACTTAAATTTTTTAACTTTAATTTTAACTTA GATAGTAAGGAAGCATGAAA
Downstream 100 bases:
>100_bases TCGACAACTATACTAGTGGCAACATACAAAAAAATTACCAAACTGGTTGTTGGCGGGCTTTAAATCGACATTTGTCAGAG TTACACTAGCCGCCAACAAA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTILNMKDLDLQGKRVLIREDLNVPVSDGVVTSDARLRASLPTIKLALEKGAAVMVMSHLGRPTEGEFNAEFSMQPVVDY LTKALDCPVRLAADYLDGIEVAVGEVVVFENVRFNLGEKKNDEALAKKMAALCDVYVMDAFGTAHRAQASTHGVGLHAPI ACAGPLLAGELEALGKALDNPARPMVAIVGGSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHKVGKSLYEADLIE EAQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEF DQFGEGTKRIAQAIAESNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLESRGQ
Sequences:
>Translated_391_residues MTILNMKDLDLQGKRVLIREDLNVPVSDGVVTSDARLRASLPTIKLALEKGAAVMVMSHLGRPTEGEFNAEFSMQPVVDY LTKALDCPVRLAADYLDGIEVAVGEVVVFENVRFNLGEKKNDEALAKKMAALCDVYVMDAFGTAHRAQASTHGVGLHAPI ACAGPLLAGELEALGKALDNPARPMVAIVGGSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHKVGKSLYEADLIE EAQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEF DQFGEGTKRIAQAIAESNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLESRGQ >Mature_390_residues TILNMKDLDLQGKRVLIREDLNVPVSDGVVTSDARLRASLPTIKLALEKGAAVMVMSHLGRPTEGEFNAEFSMQPVVDYL TKALDCPVRLAADYLDGIEVAVGEVVVFENVRFNLGEKKNDEALAKKMAALCDVYVMDAFGTAHRAQASTHGVGLHAPIA CAGPLLAGELEALGKALDNPARPMVAIVGGSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHKVGKSLYEADLIEE AQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALAEIIKNAGTVVWNGPVGVFEFD QFGEGTKRIAQAIAESNAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLESRGQ
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=39.225181598063, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI4505763, Length=413, Percent_Identity=38.498789346247, Blast_Score=263, Evalue=3e-70, Organism=Escherichia coli, GI1789294, Length=391, Percent_Identity=72.1227621483376, Blast_Score=565, Evalue=1e-162, Organism=Caenorhabditis elegans, GI17508823, Length=414, Percent_Identity=42.9951690821256, Blast_Score=296, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=40.7766990291262, Blast_Score=284, Evalue=1e-77, Organism=Drosophila melanogaster, GI17136394, Length=413, Percent_Identity=41.1622276029056, Blast_Score=266, Evalue=1e-71, Organism=Drosophila melanogaster, GI24581203, Length=411, Percent_Identity=38.9294403892944, Blast_Score=251, Evalue=7e-67,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 40876; Mature: 40745
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILNMKDLDLQGKRVLIREDLNVPVSDGVVTSDARLRASLPTIKLALEKGAAVMVMSHL CEEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCHHEECCCEEEEEHHCCCEEEHHHHC GRPTEGEFNAEFSMQPVVDYLTKALDCPVRLAADYLDGIEVAVGEVVVFENVRFNLGEKK CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCEEEEECCEECCCCCC NDEALAKKMAALCDVYVMDAFGTAHRAQASTHGVGLHAPIACAGPLLAGELEALGKALDN CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHKVGKSLYEADLIE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH EAQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHH EIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAESNAFSIAGGGDTLAAVDKYGIADK HHHHCCCEEEECCCCCEEECHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHH VSYISTGGGAFLEFLEGKELPAVAMLESRGQ HHHEECCCHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure TILNMKDLDLQGKRVLIREDLNVPVSDGVVTSDARLRASLPTIKLALEKGAAVMVMSHL EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCHHEECCCEEEEEHHCCCEEEHHHHC GRPTEGEFNAEFSMQPVVDYLTKALDCPVRLAADYLDGIEVAVGEVVVFENVRFNLGEKK CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCEEEEECCEECCCCCC NDEALAKKMAALCDVYVMDAFGTAHRAQASTHGVGLHAPIACAGPLLAGELEALGKALDN CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLESLSTKVDQLVVGGGIANTFVAAAGHKVGKSLYEADLIE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH EAQRLVANAQSRGGDIPVPTDVVVAGEFSPTATATLKDVSDVSDTDMIFDIGPDSAEALA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHH EIIKNAGTVVWNGPVGVFEFDQFGEGTKRIAQAIAESNAFSIAGGGDTLAAVDKYGIADK HHHHCCCEEEECCCCCEEECHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHH VSYISTGGGAFLEFLEGKELPAVAMLESRGQ HHHEECCCHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA