| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ysgA [C]
Identifier: 157960571
GI number: 157960571
Start: 920124
End: 920861
Strand: Direct
Name: ysgA [C]
Synonym: Spea_0743
Alternate gene names: 157960571
Gene position: 920124-920861 (Clockwise)
Preceding gene: 157960570
Following gene: 157960573
Centisome position: 17.78
GC content: 48.51
Gene sequence:
>738_bases ATGATTATTACTCAAGAAGTCCATGATATTCCCACCGCGACAGGCAGCATGCGAACCTACCTATACCGCCCCGACAGTGA AGGGCAATTCGCGACTATTATTTTTTACTCTGAGATCTTTCAGCAGACGGCACCGATCGCGCGTGCGGCAGCTATTCTCG CAGGCCATGGCTTTGTGGTCTTAGTGCCAGAGGTATTTCATGAGCTAAACCCTGTTGGCACCGTGCTTGAGTACGATGAT GTCGGTAAAGATAAAGGTAACGCCGATAAGTTTGCTAAGCCGCTTGAACACCATGACAGTGATACTGAGGCGCTGGTGGA CTTTGCTCGCAGCTTAAGTTTTTGCAGCAGTCACATTGGCAGCATGGGCGTATGTATTGGCGGTCACTTAGCCTATCGCG CGGCGCTTAATCCTGATATTCAAGGGGCCTTCTGCTTATACGCAACAGATATCCATTCTAATACGCTACCTTGTGATAAA GGCAACGATTCCTTGAGCCGCACCGGCGATATCGCAGCCGAGCTAGTGATGGTGTTTGGTAAGCAAGATCCTCATGTTTC CAGTGAAGGGCGTAAAGCTATCTATAACAAACTTGAAGCCACTGAACGCAAGTTTAATTGGCTTGAGGTGAATGCTCAGC ACGCCTTTATGCGGGATGGGAGTGATAGGTATGATCCAGCGTTAGCTATTCAGATGTATCTGCAGGCGGTAGCGTTTTTT CAGCGAACACTTAAGTAA
Upstream 100 bases:
>100_bases AGAGGCTTTGAGCGCGATTGCCCATACGACACTGACAAATGTCACCCAGCTTTTAGCCGGAGAGCATTGTCCTAACGAGC TGTATTAGGAAGGAAAGCCG
Downstream 100 bases:
>100_bases AACGCTTGAGTAATGTTTTGAATAAAATACGTTAATCAATGCAAATAAAAAGGGCCGATATAATCGGCCCTTTTATCTAT CACGGAGTAACTAATATTAA
Product: dienelactone hydrolase
Products: oxohex-2-enedioate [C]
Alternate protein names: Dienelactone Hydrolase; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolase Or ; Carboxymethylenebutenolidase Family Protein; Threonyl-TRNA Synthetase Class IIA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIITQEVHDIPTATGSMRTYLYRPDSEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPVGTVLEYDD VGKDKGNADKFAKPLEHHDSDTEALVDFARSLSFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYATDIHSNTLPCDK GNDSLSRTGDIAAELVMVFGKQDPHVSSEGRKAIYNKLEATERKFNWLEVNAQHAFMRDGSDRYDPALAIQMYLQAVAFF QRTLK
Sequences:
>Translated_245_residues MIITQEVHDIPTATGSMRTYLYRPDSEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPVGTVLEYDD VGKDKGNADKFAKPLEHHDSDTEALVDFARSLSFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYATDIHSNTLPCDK GNDSLSRTGDIAAELVMVFGKQDPHVSSEGRKAIYNKLEATERKFNWLEVNAQHAFMRDGSDRYDPALAIQMYLQAVAFF QRTLK >Mature_245_residues MIITQEVHDIPTATGSMRTYLYRPDSEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVVLVPEVFHELNPVGTVLEYDD VGKDKGNADKFAKPLEHHDSDTEALVDFARSLSFCSSHIGSMGVCIGGHLAYRAALNPDIQGAFCLYATDIHSNTLPCDK GNDSLSRTGDIAAELVMVFGKQDPHVSSEGRKAIYNKLEATERKFNWLEVNAQHAFMRDGSDRYDPALAIQMYLQAVAFF QRTLK
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320117, Length=242, Percent_Identity=39.6694214876033, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.45 [C]
Molecular weight: Translated: 27064; Mature: 27064
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITQEVHDIPTATGSMRTYLYRPDSEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVV CCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCEEE LVPEVFHELNPVGTVLEYDDVGKDKGNADKFAKPLEHHDSDTEALVDFARSLSFCSSHIG ECHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC SMGVCIGGHLAYRAALNPDIQGAFCLYATDIHSNTLPCDKGNDSLSRTGDIAAELVMVFG CCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC KQDPHVSSEGRKAIYNKLEATERKFNWLEVNAQHAFMRDGSDRYDPALAIQMYLQAVAFF CCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHH QRTLK HHHCC >Mature Secondary Structure MIITQEVHDIPTATGSMRTYLYRPDSEGQFATIIFYSEIFQQTAPIARAAAILAGHGFVV CCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCEEE LVPEVFHELNPVGTVLEYDDVGKDKGNADKFAKPLEHHDSDTEALVDFARSLSFCSSHIG ECHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC SMGVCIGGHLAYRAALNPDIQGAFCLYATDIHSNTLPCDKGNDSLSRTGDIAAELVMVFG CCCEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC KQDPHVSSEGRKAIYNKLEATERKFNWLEVNAQHAFMRDGSDRYDPALAIQMYLQAVAFF CCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHH QRTLK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA