Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960341

Identifier: 157960341

GI number: 157960341

Start: 625582

End: 626406

Strand: Direct

Name: 157960341

Synonym: Spea_0512

Alternate gene names: NA

Gene position: 625582-626406 (Clockwise)

Preceding gene: 157960340

Following gene: 157960342

Centisome position: 12.09

GC content: 42.3

Gene sequence:

>825_bases
ATGATGTCTCAATCTGTGGTAATGGTTATTGCCCAAAAAGAGATCAAAGATAGTCTGCGCAATCGCTGGGTTATTTTTAT
CTCAATGATATTTTTGATTCTGGCATTGAGTGTCACTTTTGCTGGTAGCGCCGTAGCCGGACACCTCGCCATCCCCGAGC
TCGACATCTTGATGTCGAGTCTGTCTACAGTCTCGGTCTTTATCATCCCCTTAGCGGCCATGCTAGTGAGCTACGATGCC
TTTGTCGGGGAAGATGAGTCTGGTACGCTACTGTTGCTGCTGTCGTACCCTATCAGTCGATTGCAGATCTTAATGGGCAA
ATTACTAGGGCATAGCTTGATTCTGGGCAGCACGATATGTTTTGCCTTTGGGATAACGGGGTTGTTACTCATGCTGTTTG
GTGATGGGGATAATGTTCAGGCCACCTTCAGTCTATTCTCGCAATTTATATTTAGCAGTATTTTGTTAGCCATTACCTTT
ATTTTATTGGGCTATATCGTCAGTTTAACGTCCTCTGAAAAAGCTAAGGCCGTGGGCAGTATTTTATTTGTTTGGTTCCT
ATTTGTATTGATTTACGATTTGATCTTACTGACGATATTGGTAGCGGATCTCAGCTTTATAAATCAGTATATTATCAATA
TTCTAATCGCACTGAACCCAACGGATCTCTATCGAGCAATTAATCTTATTGCTAGCGACTCAGGCAGTCTAGGAATGCTT
TCTTCATCGACTTGGGGAGTGCTTACTCTTTATGGGGGAATGTTGGTTTGGGTTTCAGGATTATTGATTCTTGCCAGTCA
GATATTTAAAAATCGAGCTCTGTAA

Upstream 100 bases:

>100_bases
GAGTGCCAAGCTTTTGATTTCAGTCTTAAAGAGCCTGCTCTGGCTGAGATCTATCATTTTTACATGGGTCAATGCGCGCA
ACTTGAAGTGGTGAGTTAAT

Downstream 100 bases:

>100_bases
TACATCCAATAGTCAATATTAAGATACCAAGCAGAGGCTTTTTAGATTGATTTAAAAGGTATTTTAAATAAGGCATTAAC
GAGAGGCTGCTAAATTTAGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA
FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF
ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML
SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL

Sequences:

>Translated_274_residues
MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA
FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF
ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML
SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL
>Mature_274_residues
MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSSLSTVSVFIIPLAAMLVSYDA
FVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTICFAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITF
ILLGYIVSLTSSEKAKAVGSILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML
SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL

Specific function: Involved in copper processing [H]

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29769; Mature: 29769

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH
LSTVSVFIIPLAAMLVSYDAFVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTIC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITFILLGYIVSLTSSEKAKAVGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC
SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSQSVVMVIAQKEIKDSLRNRWVIFISMIFLILALSVTFAGSAVAGHLAIPELDILMSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH
LSTVSVFIIPLAAMLVSYDAFVGEDESGTLLLLLSYPISRLQILMGKLLGHSLILGSTIC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FAFGITGLLLMLFGDGDNVQATFSLFSQFIFSSILLAITFILLGYIVSLTSSEKAKAVGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILFVWFLFVLIYDLILLTILVADLSFINQYIINILIALNPTDLYRAINLIASDSGSLGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEC
SSSTWGVLTLYGGMLVWVSGLLILASQIFKNRAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]