Click here to switch to the map view.

The map label for this gene is fdhE [H]

Identifier: 157960270

GI number: 157960270

Start: 548163

End: 549134

Strand: Direct

Name: fdhE [H]

Synonym: Spea_0441

Alternate gene names: 157960270

Gene position: 548163-549134 (Clockwise)

Preceding gene: 157960269

Following gene: 157960271

Centisome position: 10.59

GC content: 51.34

Gene sequence:

>972_bases
ATGAGCACAGCAATACTCGACGCTGAAAAGATCCCCGGCCAGTCACTGGATATTAAAACCGTGATCGCAGCTGACCCAAA
AGCCGTTTATCAATTTAGAGCGAAGCGACTCGCTGAGCTAGCCGAAGAGTCTGGATTAACAGAATACTTTGGCTTACTCG
AGCAGTTAGTTGGCGCACAAGAAAAGGTAGCGGCACTGTATGGTGAGGCGGCAAAGAGCTGCTTTGGCCCAAAGCCAAAG
TTAGATCTAAACCAAAGCCAGCCGATGGCGCAGCAGCACTTTGAATGGGGCAACTATTGGCAGTCGGTATTGCTGGAGCT
GATTAGTGAGCTTATGCCTAAAGTCAGTACTGACTTACATGGGGTGCTAAAGGAGCTAGCCAAGGCTGAAGCCGATGTGT
TGCAAGGCTATGCCCGGTCGATGCTGGATGGACACTTTGCACAAGTGCCTGCGAAGTACAGCCTGTTTATCTGGGCGGCG
CTGTCAGTGTACTGGTCACATTGGGCGGTTGATGTTGCCGAGCAATTGGCTGATGAAGGCGAGACACATAAACGCTTATG
CCCAGTTTGTGGCAGTCACCCTGTGGGTAGCGTGATCAAAGAAGAGCCTCGTGCTGGACTGAGATACCTGCATTGTAGCC
TGTGTGAAACACAGTGGCATGAAGTGCGCGCTGAGTGTACATCATGCGGCGAAAGCAAGGGCGTGTTCTTGTGGGCTGAA
ACCGAAACTAATGCCGCTATTCGTGTTGAAAGCTGCGACACCTGTCAGGGTTATACCAAGATGTTCTTTACCGACATCAA
CCCAAGACTGGAAGTGGCAGCAGACGATTTGGCGACCTTAGTGATGGACAGCCATTTGGTTGAGCAGGGATACAGCGCAA
CCACGGTGAACCCATTGCTGCTCGCTCATGAACAAGAAGTGGAGCCTCAGCTTGATGAAGAGCCTCAGCCTAAAGTCGGT
GATATCCACTAG

Upstream 100 bases:

>100_bases
TGTTGTACGGCTATGTGTCGCGGGCTTGGTGCAAGAAGCATCACCCTAACATGCTAAACGATCCTGAATTAAAGACTAAT
AAGCAGGAAAAACACTAATT

Downstream 100 bases:

>100_bases
CCTGCTGTAATAAACTGGCTGTAAGCCGCTTTTAAGCTAATTAGTAAGCAAGAGCCGCATCTCGGTGCGGCTCTTTTATT
AACCCAAATCTTTAAAATCA

Product: formate dehydrogenase accessory protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSTAILDAEKIPGQSLDIKTVIAADPKAVYQFRAKRLAELAEESGLTEYFGLLEQLVGAQEKVAALYGEAAKSCFGPKPK
LDLNQSQPMAQQHFEWGNYWQSVLLELISELMPKVSTDLHGVLKELAKAEADVLQGYARSMLDGHFAQVPAKYSLFIWAA
LSVYWSHWAVDVAEQLADEGETHKRLCPVCGSHPVGSVIKEEPRAGLRYLHCSLCETQWHEVRAECTSCGESKGVFLWAE
TETNAAIRVESCDTCQGYTKMFFTDINPRLEVAADDLATLVMDSHLVEQGYSATTVNPLLLAHEQEVEPQLDEEPQPKVG
DIH

Sequences:

>Translated_323_residues
MSTAILDAEKIPGQSLDIKTVIAADPKAVYQFRAKRLAELAEESGLTEYFGLLEQLVGAQEKVAALYGEAAKSCFGPKPK
LDLNQSQPMAQQHFEWGNYWQSVLLELISELMPKVSTDLHGVLKELAKAEADVLQGYARSMLDGHFAQVPAKYSLFIWAA
LSVYWSHWAVDVAEQLADEGETHKRLCPVCGSHPVGSVIKEEPRAGLRYLHCSLCETQWHEVRAECTSCGESKGVFLWAE
TETNAAIRVESCDTCQGYTKMFFTDINPRLEVAADDLATLVMDSHLVEQGYSATTVNPLLLAHEQEVEPQLDEEPQPKVG
DIH
>Mature_322_residues
STAILDAEKIPGQSLDIKTVIAADPKAVYQFRAKRLAELAEESGLTEYFGLLEQLVGAQEKVAALYGEAAKSCFGPKPKL
DLNQSQPMAQQHFEWGNYWQSVLLELISELMPKVSTDLHGVLKELAKAEADVLQGYARSMLDGHFAQVPAKYSLFIWAAL
SVYWSHWAVDVAEQLADEGETHKRLCPVCGSHPVGSVIKEEPRAGLRYLHCSLCETQWHEVRAECTSCGESKGVFLWAET
ETNAAIRVESCDTCQGYTKMFFTDINPRLEVAADDLATLVMDSHLVEQGYSATTVNPLLLAHEQEVEPQLDEEPQPKVGD
IH

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

Organism=Escherichia coli, GI1790324, Length=281, Percent_Identity=37.3665480427046, Blast_Score=201, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 35808; Mature: 35677

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAILDAEKIPGQSLDIKTVIAADPKAVYQFRAKRLAELAEESGLTEYFGLLEQLVGAQ
CCCCCCCHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHH
EKVAALYGEAAKSCFGPKPKLDLNQSQPMAQQHFEWGNYWQSVLLELISELMPKVSTDLH
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLKELAKAEADVLQGYARSMLDGHFAQVPAKYSLFIWAALSVYWSHWAVDVAEQLADEG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ETHKRLCPVCGSHPVGSVIKEEPRAGLRYLHCSLCETQWHEVRAECTSCGESKGVFLWAE
CHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TETNAAIRVESCDTCQGYTKMFFTDINPRLEVAADDLATLVMDSHLVEQGYSATTVNPLL
CCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAHEQEVEPQLDEEPQPKVGDIH
EECCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STAILDAEKIPGQSLDIKTVIAADPKAVYQFRAKRLAELAEESGLTEYFGLLEQLVGAQ
CCCCCCHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHH
EKVAALYGEAAKSCFGPKPKLDLNQSQPMAQQHFEWGNYWQSVLLELISELMPKVSTDLH
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLKELAKAEADVLQGYARSMLDGHFAQVPAKYSLFIWAALSVYWSHWAVDVAEQLADEG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ETHKRLCPVCGSHPVGSVIKEEPRAGLRYLHCSLCETQWHEVRAECTSCGESKGVFLWAE
CHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
TETNAAIRVESCDTCQGYTKMFFTDINPRLEVAADDLATLVMDSHLVEQGYSATTVNPLL
CCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAHEQEVEPQLDEEPQPKVGDIH
EECCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]