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The map label for this gene is yraN [C]

Identifier: 157960080

GI number: 157960080

Start: 279997

End: 280335

Strand: Reverse

Name: yraN [C]

Synonym: Spea_0251

Alternate gene names: 157960080

Gene position: 280335-279997 (Counterclockwise)

Preceding gene: 157960081

Following gene: 157960079

Centisome position: 5.42

GC content: 47.49

Gene sequence:

>339_bases
ATGGCAAAGAATCAGAACCAGGGTCAAATAGCCGAACATAGTGCACGGCGGTACTTGGAACAACGCGGCCTGACATTTGT
CGAACAAAACGTACGATATCGCTTTGGCGAAATCGACATTGTGATGAAAGATGGCAGCGATTGGGTGTTCGTTGAGGTAA
AATACCGCTCTCCATCTCAATACGGTGGAGCCGTTAATGCCTTGAGCCAAGCACAAACTCTACGCATTAGAAAAGCGGCG
AGTCATTACATACAGATTAATCGAATCGATGCCATATGTCGTTTCGATGTTGTCGCGGTCGATCCCGATGCCATGCAGTG
GATCCGCGATGCTTTTTAA

Upstream 100 bases:

>100_bases
TGAGGTCAGCAAGATTTACAGGTAAATTCGCACAGAAAAGCAGTCTAGGTTATTGCTTTAGGATATAGTCAAATTGACGC
CACAGGGATGAGCGAGTTTG

Downstream 100 bases:

>100_bases
ATAGCTTAATTTTCATATGCTCAGTTCGGTAAAATACCGTTATACCAAGCATATATAAACATAGGGTTTATCCATGTTAG
AACGCATAAAAGACAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAKNQNQGQIAEHSARRYLEQRGLTFVEQNVRYRFGEIDIVMKDGSDWVFVEVKYRSPSQYGGAVNALSQAQTLRIRKAA
SHYIQINRIDAICRFDVVAVDPDAMQWIRDAF

Sequences:

>Translated_112_residues
MAKNQNQGQIAEHSARRYLEQRGLTFVEQNVRYRFGEIDIVMKDGSDWVFVEVKYRSPSQYGGAVNALSQAQTLRIRKAA
SHYIQINRIDAICRFDVVAVDPDAMQWIRDAF
>Mature_111_residues
AKNQNQGQIAEHSARRYLEQRGLTFVEQNVRYRFGEIDIVMKDGSDWVFVEVKYRSPSQYGGAVNALSQAQTLRIRKAAS
HYIQINRIDAICRFDVVAVDPDAMQWIRDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=112, Percent_Identity=38.3928571428571, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y251_SHEPA (A8GZ42)

Other databases:

- EMBL:   CP000851
- RefSeq:   YP_001500114.1
- ProteinModelPortal:   A8GZ42
- STRING:   A8GZ42
- GeneID:   5660651
- GenomeReviews:   CP000851_GR
- KEGG:   spl:Spea_0251
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- ProtClustDB:   PRK12497
- BioCyc:   SPEA398579:SPEA_0251-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 12939; Mature: 12808

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNQNQGQIAEHSARRYLEQRGLTFVEQNVRYRFGEIDIVMKDGSDWVFVEVKYRSPSQ
CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEECEEEEEEECCCCEEEEEEEECCCCC
YGGAVNALSQAQTLRIRKAASHYIQINRIDAICRFDVVAVDPDAMQWIRDAF
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEEECHHHHHHHHHCC
>Mature Secondary Structure 
AKNQNQGQIAEHSARRYLEQRGLTFVEQNVRYRFGEIDIVMKDGSDWVFVEVKYRSPSQ
CCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEECEEEEEEECCCCEEEEEEEECCCCC
YGGAVNALSQAQTLRIRKAASHYIQINRIDAICRFDVVAVDPDAMQWIRDAF
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA