| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fhiA [H]
Identifier: 157959923
GI number: 157959923
Start: 101823
End: 103904
Strand: Direct
Name: fhiA [H]
Synonym: Spea_0093
Alternate gene names: 157959923
Gene position: 101823-103904 (Clockwise)
Preceding gene: 157959922
Following gene: 157959931
Centisome position: 1.97
GC content: 49.86
Gene sequence:
>2082_bases ATGAACTGGTTTTCGCGTACTTTTACCGGTAGCCCAGGCTATATAGGCATTCCTATTATGCTATTGGCCGTATTGGCGAT GGTGATCTTGCCTTTACCGCCATGGTTATTGGATATCCTATTTACCTTCAACATAGTGTTGGCTGTGATGGTGCTGCTGG CCAGCGTCTCGATTCGCAGGCCACTGGAACTGTCAGTTTTCCCTACCGTATTGTTATTGGCAACGCTGTTACGTTTAACC TTGAACGTGGCCTCTACGCGAGTGGTGTTAATTGAAGGCCATGAAGGTGGTGATGCAGCAGGTAAGGTGATCCAAGCATT CGGTGAGGTGGTGATCGGCGGTAACTATGTTGTCGGTGCGGTGATCTTCCTTATCTTAATGATCATCAACTTCGTGGTGA TCACTAAGGGTGGCGAACGAATTTCTGAAGTGTCGGCGCGATTCACTCTAGATGCCTTACCCGGTAAGCAGATGGCGATT GATGCCGATCTCAATGCGGGAGTATTGACTCAGGAGCAGGCGCGAGAAAGACGTCAGGATGTTGCGCGTGAAGCTGACTT CTACGGCTCTATGGACGGTGCTTCTAAGTTTGTTCGTGGTGATGCGATTGCCAGTATGCTTATCTTAGCTATCAACATGC TGGGTGGTTTAGCAATCGGTATCTTCATGCATGACTTAGCCGTTGGTGAAGCATTTAAGACTTATGCACTGCTTACCATT GGTGACGGCTTAGTTGCTCAGATCCCTTCACTGTTATTGGCGACCGCTGCTGCGATTATTGTGACTCGAGTTTCAGACGC TGAAGAGATGCCTGAACAGCTGCGCAATCAATTGTTGGCTAACCCTAAAACCTTGGCTACTTCAGCGGCTGTGATGTTCA TTCTGGGTATCGTGCCAGGAATGCCAACATTTGTGTTCCTCTCTTTTGCTGCTTTGCTTGGTTTTGCTGCTTGGAAGCAG GATAAACGAGGGCCAGTGATAAAAGAGTCGAAAATAGAGCAGCAGTTAGAGAACAATTTAAGCGAGCCCTCTGCGCCGAG TTGGGACGCTTTGCCCTATACCGATCTTATCGAAGTTCGCCTGGGTTATCGCTTGGTGCACTTGGTTGAGCGCAGTAAGG GCGCCGAGCTACAGAAGCGCCTAACGGGTATTCGTCGTACTCTGTCTGAGCAGGCGGGTTTCTTGTTGTCTGAAGTCAGA GTTCGCGATAACTTGTCGTTGGCGCCGAACGCCTATCAAATTAGCATGATGGGTAACCCTGTGGTAACGGCAGAATTAGA GCCAGATCGTCTGATGGCGATTAAGAGTGGTCCTGTATTTGGTGATATCGATGGCATCATCACCAAGGAGCCGGCCTATC AGATGGATGCGATTTGGGTGGAACAAGATCATAAGGCCAAGGCGCTGAATCTGGGCTATTCGGTGGTGGATAATGCCACA GTTATCGCCACCCATGTGAGTAAACTCATTAGAGAGTCACTGCCGGATATGTTGCAACATGATGACGTATTGGCACTTAG CGACCGATTGGCGAAACAGTCGCCTAAATTGGCTGAGGCACTCAATGCTGCATTAACGCCTATCTTGCAGCTTAAGGTGT ATCGCTTACTGCTTAAAGAACAGGTGTCGCTCAAGGATATTCGCACCATAGCGACCACCTTGCTCGATTGCAGTGAGAAC AGCAAAGACCCTGTTTTATTGGCGGCCGATGTTCGCTGCGCCCTGCGTAACTCGATTTTACATTCGATAGTGGGAACGGC AACTAAGTTGAATGTGATGACTCTAGCGCCGGAACTTGAGCAAACCTTGATGGTGGCGCTGAATCAGTCGCAGCAGCAGG GAAAAGTCGCTCTCGATAGCTTCCCGGTCGACCCGCAATTATTGGCGCAGTTACAGCAGCGGATGCCACAATTGCTGGCA GAGGCAAAAGAGCAAGGACATAGCCCGCTGTTACTGGTCTCTCCACCGCTGCGTCCTATCCTAGCTCGTTACGCCTTGGC ATTTGCTAGAGGTTTACATGTTTTGTCTTACAATGAGATCCCCGAGACGCGGGAGCTGATGGTGGCGGGGCAGTTAGGTT AA
Upstream 100 bases:
>100_bases AATTAGGGCCGCAAGGCAGGGTAAACAGGCTAAACCTGACCCTCTACCTCACTTTTTTATTCCCAACAACTTACGACACG ATTAAAGGATATCTGATTTA
Downstream 100 bases:
>100_bases TCGGCCACATACGAAAAAGGGATAGCTCGCTATCCCTTTTTTATTGCTCGTTAGCCTATTAGTTAATTTGCTTTAAGAAC TCGCATAATGCGTTGAGCGC
Product: flagellar biosynthesis protein FlhA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MNWFSRTFTGSPGYIGIPIMLLAVLAMVILPLPPWLLDILFTFNIVLAVMVLLASVSIRRPLELSVFPTVLLLATLLRLT LNVASTRVVLIEGHEGGDAAGKVIQAFGEVVIGGNYVVGAVIFLILMIINFVVITKGGERISEVSARFTLDALPGKQMAI DADLNAGVLTQEQARERRQDVAREADFYGSMDGASKFVRGDAIASMLILAINMLGGLAIGIFMHDLAVGEAFKTYALLTI GDGLVAQIPSLLLATAAAIIVTRVSDAEEMPEQLRNQLLANPKTLATSAAVMFILGIVPGMPTFVFLSFAALLGFAAWKQ DKRGPVIKESKIEQQLENNLSEPSAPSWDALPYTDLIEVRLGYRLVHLVERSKGAELQKRLTGIRRTLSEQAGFLLSEVR VRDNLSLAPNAYQISMMGNPVVTAELEPDRLMAIKSGPVFGDIDGIITKEPAYQMDAIWVEQDHKAKALNLGYSVVDNAT VIATHVSKLIRESLPDMLQHDDVLALSDRLAKQSPKLAEALNAALTPILQLKVYRLLLKEQVSLKDIRTIATTLLDCSEN SKDPVLLAADVRCALRNSILHSIVGTATKLNVMTLAPELEQTLMVALNQSQQQGKVALDSFPVDPQLLAQLQQRMPQLLA EAKEQGHSPLLLVSPPLRPILARYALAFARGLHVLSYNEIPETRELMVAGQLG
Sequences:
>Translated_693_residues MNWFSRTFTGSPGYIGIPIMLLAVLAMVILPLPPWLLDILFTFNIVLAVMVLLASVSIRRPLELSVFPTVLLLATLLRLT LNVASTRVVLIEGHEGGDAAGKVIQAFGEVVIGGNYVVGAVIFLILMIINFVVITKGGERISEVSARFTLDALPGKQMAI DADLNAGVLTQEQARERRQDVAREADFYGSMDGASKFVRGDAIASMLILAINMLGGLAIGIFMHDLAVGEAFKTYALLTI GDGLVAQIPSLLLATAAAIIVTRVSDAEEMPEQLRNQLLANPKTLATSAAVMFILGIVPGMPTFVFLSFAALLGFAAWKQ DKRGPVIKESKIEQQLENNLSEPSAPSWDALPYTDLIEVRLGYRLVHLVERSKGAELQKRLTGIRRTLSEQAGFLLSEVR VRDNLSLAPNAYQISMMGNPVVTAELEPDRLMAIKSGPVFGDIDGIITKEPAYQMDAIWVEQDHKAKALNLGYSVVDNAT VIATHVSKLIRESLPDMLQHDDVLALSDRLAKQSPKLAEALNAALTPILQLKVYRLLLKEQVSLKDIRTIATTLLDCSEN SKDPVLLAADVRCALRNSILHSIVGTATKLNVMTLAPELEQTLMVALNQSQQQGKVALDSFPVDPQLLAQLQQRMPQLLA EAKEQGHSPLLLVSPPLRPILARYALAFARGLHVLSYNEIPETRELMVAGQLG >Mature_693_residues MNWFSRTFTGSPGYIGIPIMLLAVLAMVILPLPPWLLDILFTFNIVLAVMVLLASVSIRRPLELSVFPTVLLLATLLRLT LNVASTRVVLIEGHEGGDAAGKVIQAFGEVVIGGNYVVGAVIFLILMIINFVVITKGGERISEVSARFTLDALPGKQMAI DADLNAGVLTQEQARERRQDVAREADFYGSMDGASKFVRGDAIASMLILAINMLGGLAIGIFMHDLAVGEAFKTYALLTI GDGLVAQIPSLLLATAAAIIVTRVSDAEEMPEQLRNQLLANPKTLATSAAVMFILGIVPGMPTFVFLSFAALLGFAAWKQ DKRGPVIKESKIEQQLENNLSEPSAPSWDALPYTDLIEVRLGYRLVHLVERSKGAELQKRLTGIRRTLSEQAGFLLSEVR VRDNLSLAPNAYQISMMGNPVVTAELEPDRLMAIKSGPVFGDIDGIITKEPAYQMDAIWVEQDHKAKALNLGYSVVDNAT VIATHVSKLIRESLPDMLQHDDVLALSDRLAKQSPKLAEALNAALTPILQLKVYRLLLKEQVSLKDIRTIATTLLDCSEN SKDPVLLAADVRCALRNSILHSIVGTATKLNVMTLAPELEQTLMVALNQSQQQGKVALDSFPVDPQLLAQLQQRMPQLLA EAKEQGHSPLLLVSPPLRPILARYALAFARGLHVLSYNEIPETRELMVAGQLG
Specific function: Not Known. [C]
COG id: COG1298
COG function: function code NU; Flagellar biosynthesis pathway, component FlhA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]
Homologues:
Organism=Escherichia coli, GI1788187, Length=678, Percent_Identity=44.9852507374631, Blast_Score=536, Evalue=1e-153,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001712 [H]
Pfam domain/function: PF00771 FHIPEP [H]
EC number: NA
Molecular weight: Translated: 75381; Mature: 75381
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00994 FHIPEP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWFSRTFTGSPGYIGIPIMLLAVLAMVILPLPPWLLDILFTFNIVLAVMVLLASVSIRR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PLELSVFPTVLLLATLLRLTLNVASTRVVLIEGHEGGDAAGKVIQAFGEVVIGGNYVVGA CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHHH VIFLILMIINFVVITKGGERISEVSARFTLDALPGKQMAIDADLNAGVLTQEQARERRQD HHHHHHHHHHHHEECCCCHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH VAREADFYGSMDGASKFVRGDAIASMLILAINMLGGLAIGIFMHDLAVGEAFKTYALLTI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE GDGLVAQIPSLLLATAAAIIVTRVSDAEEMPEQLRNQLLANPKTLATSAAVMFILGIVPG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC MPTFVFLSFAALLGFAAWKQDKRGPVIKESKIEQQLENNLSEPSAPSWDALPYTDLIEVR CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LGYRLVHLVERSKGAELQKRLTGIRRTLSEQAGFLLSEVRVRDNLSLAPNAYQISMMGNP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCE VVTAELEPDRLMAIKSGPVFGDIDGIITKEPAYQMDAIWVEQDHKAKALNLGYSVVDNAT EEEEEECCCCEEEEECCCCEECCCCCEECCCCCCEEEEEEECCCCCHHHHCCHHHHCCCH VIATHVSKLIRESLPDMLQHDDVLALSDRLAKQSPKLAEALNAALTPILQLKVYRLLLKE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVSLKDIRTIATTLLDCSENSKDPVLLAADVRCALRNSILHSIVGTATKLNVMTLAPELE HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHEEEEEECHHHH QTLMVALNQSQQQGKVALDSFPVDPQLLAQLQQRMPQLLAEAKEQGHSPLLLVSPPLRPI HHHHHHHCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH LARYALAFARGLHVLSYNEIPETRELMVAGQLG HHHHHHHHHHHHHEEECCCCCCCHHEEEECCCC >Mature Secondary Structure MNWFSRTFTGSPGYIGIPIMLLAVLAMVILPLPPWLLDILFTFNIVLAVMVLLASVSIRR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PLELSVFPTVLLLATLLRLTLNVASTRVVLIEGHEGGDAAGKVIQAFGEVVIGGNYVVGA CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHHH VIFLILMIINFVVITKGGERISEVSARFTLDALPGKQMAIDADLNAGVLTQEQARERRQD HHHHHHHHHHHHEECCCCHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH VAREADFYGSMDGASKFVRGDAIASMLILAINMLGGLAIGIFMHDLAVGEAFKTYALLTI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE GDGLVAQIPSLLLATAAAIIVTRVSDAEEMPEQLRNQLLANPKTLATSAAVMFILGIVPG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC MPTFVFLSFAALLGFAAWKQDKRGPVIKESKIEQQLENNLSEPSAPSWDALPYTDLIEVR CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LGYRLVHLVERSKGAELQKRLTGIRRTLSEQAGFLLSEVRVRDNLSLAPNAYQISMMGNP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCE VVTAELEPDRLMAIKSGPVFGDIDGIITKEPAYQMDAIWVEQDHKAKALNLGYSVVDNAT EEEEEECCCCEEEEECCCCEECCCCCEECCCCCCEEEEEEECCCCCHHHHCCHHHHCCCH VIATHVSKLIRESLPDMLQHDDVLALSDRLAKQSPKLAEALNAALTPILQLKVYRLLLKE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVSLKDIRTIATTLLDCSENSKDPVLLAADVRCALRNSILHSIVGTATKLNVMTLAPELE HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHEEEEEECHHHH QTLMVALNQSQQQGKVALDSFPVDPQLLAQLQQRMPQLLAEAKEQGHSPLLLVSPPLRPI HHHHHHHCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH LARYALAFARGLHVLSYNEIPETRELMVAGQLG HHHHHHHHHHHHHEEECCCCCCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]