| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flhB [H]
Identifier: 157959922
GI number: 157959922
Start: 100677
End: 101807
Strand: Direct
Name: flhB [H]
Synonym: Spea_0092
Alternate gene names: 157959922
Gene position: 100677-101807 (Clockwise)
Preceding gene: 157959921
Following gene: 157959923
Centisome position: 1.95
GC content: 46.95
Gene sequence:
>1131_bases ATGAGTAAAGATACTGGCCAGAGTAAAACGGAAGATGCAACACCCAAGAAGCTTAAACAAGCCCGTGAGCAGGGGCAGGT GCCTCGCTCGAAAGATTTCACTTCTGCCGCTTTAGTTATGGGTTGCGCGTTGTTGCTCACAACCAGTGCCGGTGAGATTG GCGCGAGGGTAGCGCAGCTAGCGCGTACCAATATGCAATTCACCAAAGCGCAATTAGATGAACCAGGCATGATGACTCGC CATTTAGGCCAAGCGCTGCTAGAGATCCTCTATATTCTTGCTCCGCTGTTTATCTTGGTGGCCTTGATAGCTATGATCGC TGGAGCTATGCCAGGTGGCTGGATATTTAACTTTGGCAATGCAGGCTTTAAATACAGTCGTATCGATCCAATTGCCGGGC TTGGCAGAATGGTATCGATTAAGTCATTGGCTGAACTGATTAAGTCAGTACTTAAGATTGTGTTGCTAGGCGGGATCATG TTGGTTTTTCTTGATAAGAACTTGCAAACCCTACTGACATTTAGCCAATTGCCAATCGATGAAGCGATTACGCGGGTAAT CGATATGCTGTCGCTGGGGGTGTTTTATTTAGGGCTGGGACTGTTATTCATCGCTTGTATCGATCTGCCATACCAGTATT GGCAACACCACAATGAGCTGAAGATGTCATTGCAAGAGGTCAAAGATGAGCATAAGCAGCAAGAGGGTAAACCTGAGATC AAGGCTAAGATCCGCCAAATGCAGCAACGAATTAGTCGCTCAAGAGCCGATGTCTCCATTCCTAATGCCGATGTTCTTTT AGTAAACCCTACTCATTATGCCGTGGCACTAAAATACGATGCTAATAAAGCCGATGCGCCTTATGTACTGACTAAGGGCA CTGACGAGCTGGCGCTTTATATGCGAGAAGTTGCTAAGCGCCATGGTGTGGAGATATTAGAGTTGCCACCGCTCACTAGG GCCATTTATTACTCGACAAATATCGAGCAGCAGATCCCCGCTTCGCTATTTGTGGCAATTGCCCATGTACTGACATACGT CATGCAAATTAGGGCCGCAAGGCAGGGTAAACAGGCTAAACCTGACCCTCTACCTCACTTTTTTATTCCCAACAACTTAC GACACGATTAA
Upstream 100 bases:
>100_bases TGCTATGTGTTTTCTTTTCATTCAGTGGCTTACCCAGTCGCTATAGTGATCTCTGTTTAGACGCCTTGTCTGCCATGTAT CAGTTTATTGGGGGGATAAC
Downstream 100 bases:
>100_bases AGGATATCTGATTTAATGAACTGGTTTTCGCGTACTTTTACCGGTAGCCCAGGCTATATAGGCATTCCTATTATGCTATT GGCCGTATTGGCGATGGTGA
Product: flagellar biosynthetic protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSKDTGQSKTEDATPKKLKQAREQGQVPRSKDFTSAALVMGCALLLTTSAGEIGARVAQLARTNMQFTKAQLDEPGMMTR HLGQALLEILYILAPLFILVALIAMIAGAMPGGWIFNFGNAGFKYSRIDPIAGLGRMVSIKSLAELIKSVLKIVLLGGIM LVFLDKNLQTLLTFSQLPIDEAITRVIDMLSLGVFYLGLGLLFIACIDLPYQYWQHHNELKMSLQEVKDEHKQQEGKPEI KAKIRQMQQRISRSRADVSIPNADVLLVNPTHYAVALKYDANKADAPYVLTKGTDELALYMREVAKRHGVEILELPPLTR AIYYSTNIEQQIPASLFVAIAHVLTYVMQIRAARQGKQAKPDPLPHFFIPNNLRHD
Sequences:
>Translated_376_residues MSKDTGQSKTEDATPKKLKQAREQGQVPRSKDFTSAALVMGCALLLTTSAGEIGARVAQLARTNMQFTKAQLDEPGMMTR HLGQALLEILYILAPLFILVALIAMIAGAMPGGWIFNFGNAGFKYSRIDPIAGLGRMVSIKSLAELIKSVLKIVLLGGIM LVFLDKNLQTLLTFSQLPIDEAITRVIDMLSLGVFYLGLGLLFIACIDLPYQYWQHHNELKMSLQEVKDEHKQQEGKPEI KAKIRQMQQRISRSRADVSIPNADVLLVNPTHYAVALKYDANKADAPYVLTKGTDELALYMREVAKRHGVEILELPPLTR AIYYSTNIEQQIPASLFVAIAHVLTYVMQIRAARQGKQAKPDPLPHFFIPNNLRHD >Mature_375_residues SKDTGQSKTEDATPKKLKQAREQGQVPRSKDFTSAALVMGCALLLTTSAGEIGARVAQLARTNMQFTKAQLDEPGMMTRH LGQALLEILYILAPLFILVALIAMIAGAMPGGWIFNFGNAGFKYSRIDPIAGLGRMVSIKSLAELIKSVLKIVLLGGIML VFLDKNLQTLLTFSQLPIDEAITRVIDMLSLGVFYLGLGLLFIACIDLPYQYWQHHNELKMSLQEVKDEHKQQEGKPEIK AKIRQMQQRISRSRADVSIPNADVLLVNPTHYAVALKYDANKADAPYVLTKGTDELALYMREVAKRHGVEILELPPLTRA IYYSTNIEQQIPASLFVAIAHVLTYVMQIRAARQGKQAKPDPLPHFFIPNNLRHD
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=371, Percent_Identity=35.0404312668464, Blast_Score=229, Evalue=3e-61,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 41848; Mature: 41717
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDTGQSKTEDATPKKLKQAREQGQVPRSKDFTSAALVMGCALLLTTSAGEIGARVAQL CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARTNMQFTKAQLDEPGMMTRHLGQALLEILYILAPLFILVALIAMIAGAMPGGWIFNFGN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC AGFKYSRIDPIAGLGRMVSIKSLAELIKSVLKIVLLGGIMLVFLDKNLQTLLTFSQLPID CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH EAITRVIDMLSLGVFYLGLGLLFIACIDLPYQYWQHHNELKMSLQEVKDEHKQQEGKPEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KAKIRQMQQRISRSRADVSIPNADVLLVNPTHYAVALKYDANKADAPYVLTKGTDELALY HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEECCCHHHHHH MREVAKRHGVEILELPPLTRAIYYSTNIEQQIPASLFVAIAHVLTYVMQIRAARQGKQAK HHHHHHHCCCEEEECCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDPLPHFFIPNNLRHD CCCCCEEECCCCCCCC >Mature Secondary Structure SKDTGQSKTEDATPKKLKQAREQGQVPRSKDFTSAALVMGCALLLTTSAGEIGARVAQL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARTNMQFTKAQLDEPGMMTRHLGQALLEILYILAPLFILVALIAMIAGAMPGGWIFNFGN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC AGFKYSRIDPIAGLGRMVSIKSLAELIKSVLKIVLLGGIMLVFLDKNLQTLLTFSQLPID CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH EAITRVIDMLSLGVFYLGLGLLFIACIDLPYQYWQHHNELKMSLQEVKDEHKQQEGKPEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KAKIRQMQQRISRSRADVSIPNADVLLVNPTHYAVALKYDANKADAPYVLTKGTDELALY HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEECCCHHHHHH MREVAKRHGVEILELPPLTRAIYYSTNIEQQIPASLFVAIAHVLTYVMQIRAARQGKQAK HHHHHHHCCCEEEECCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PDPLPHFFIPNNLRHD CCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]