| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is engB [H]
Identifier: 157959931
GI number: 157959931
Start: 112447
End: 113124
Strand: Direct
Name: engB [H]
Synonym: Spea_0101
Alternate gene names: 157959931
Gene position: 112447-113124 (Clockwise)
Preceding gene: 157959923
Following gene: 157959933
Centisome position: 2.17
GC content: 43.51
Gene sequence:
>678_bases GTGAGTGAATCTCATATCGATTTCCGTAAAGCAGAGTTTTTAATTAGTGCACCTGATATTGCACACTTGAATGAATACCT TCCTGGCGACGTTGGGGTGGAGATCGCATTTGCGGGCCGTTCGAATGCGGGTAAGTCGAGTGCTTTAAATTTACTGACTG AGCAAAAAATTGCTCGAACCAGTAAAACGCCTGGGCGTACGCAGTTAATTAACGTCTTTAGATTGGATAAACACCGCCGC TTGGTGGATTTACCGGGTTATGGTTTTGCTCAAGTTCCTTTGGCTCTTAAGCTTAAGTGGCAAGAATCATTGGGTGAATA CTTGCTTAAACGTGACTGTTTGAGCGGTGTGGTGGTATTGATGGATATCCGTCATCCACTAAAAGATCTTGATATGCAAA TGATTGAGTGGGCTGTTGAGAGTCATATTCCTGTTTTAGCACTATTAACCAAAGCCGATAAGCTAGGTCAAAGCGCTAGA ATGAAGATGGTTAATGAAGTGCGCAAGAAACTAAGCCATTTTGAAGACGGCGTAAAGGTTGAGCCTTTCTCTTCATTAAA AGGGATTGGTAAAGGTAAGGTGCTGGGGATCCTAGATAGTTGGTGTAAGCCTGAATGGTTGATGCAGCAACTGGAAGCCG ATGCTATTGCCGCTCAAGCTGAAGCGGATAAAGATTAA
Upstream 100 bases:
>100_bases TATTTTATGTGATCGGGGTAATATTTTACACGAAATTGTGAAAATGTAAGCAACTCTTCGATATTTATAAAGGTTTGTGA GTAAAATTTTGGAGTTAATT
Downstream 100 bases:
>100_bases CGCTCTAATGTCATAGCTGTGGCACGCAGATAGCTAAATGACGCTCCTATTAAAGGGGCGTTTTTTTTGGTCTTTTTTAG CGGCATTAAGCGAAAAACAG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSESHIDFRKAEFLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQKIARTSKTPGRTQLINVFRLDKHRR LVDLPGYGFAQVPLALKLKWQESLGEYLLKRDCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSAR MKMVNEVRKKLSHFEDGVKVEPFSSLKGIGKGKVLGILDSWCKPEWLMQQLEADAIAAQAEADKD
Sequences:
>Translated_225_residues MSESHIDFRKAEFLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQKIARTSKTPGRTQLINVFRLDKHRR LVDLPGYGFAQVPLALKLKWQESLGEYLLKRDCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSAR MKMVNEVRKKLSHFEDGVKVEPFSSLKGIGKGKVLGILDSWCKPEWLMQQLEADAIAAQAEADKD >Mature_224_residues SESHIDFRKAEFLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQKIARTSKTPGRTQLINVFRLDKHRRL VDLPGYGFAQVPLALKLKWQESLGEYLLKRDCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSARM KMVNEVRKKLSHFEDGVKVEPFSSLKGIGKGKVLGILDSWCKPEWLMQQLEADAIAAQAEADKD
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=139, Percent_Identity=35.9712230215827, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI145693205, Length=199, Percent_Identity=61.8090452261307, Blast_Score=246, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6320543, Length=149, Percent_Identity=31.5436241610738, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 25102; Mature: 24970
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESHIDFRKAEFLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQKIART CCCCCCCHHHHHEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH SKTPGRTQLINVFRLDKHRRLVDLPGYGFAQVPLALKLKWQESLGEYLLKRDCLSGVVVL CCCCCHHHHHHHHHHCCCCCEEECCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHH MDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSARMKMVNEVRKKLSHFEDGVKV HHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEE EPFSSLKGIGKGKVLGILDSWCKPEWLMQQLEADAIAAQAEADKD CCHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SESHIDFRKAEFLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQKIART CCCCCCHHHHHEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH SKTPGRTQLINVFRLDKHRRLVDLPGYGFAQVPLALKLKWQESLGEYLLKRDCLSGVVVL CCCCCHHHHHHHHHHCCCCCEEECCCCCHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHH MDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSARMKMVNEVRKKLSHFEDGVKV HHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEE EPFSSLKGIGKGKVLGILDSWCKPEWLMQQLEADAIAAQAEADKD CCHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA