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The map label for this gene is yjcF [C]

Identifier: 157825933

GI number: 157825933

Start: 784579

End: 786324

Strand: Direct

Name: yjcF [C]

Synonym: A1C_04365

Alternate gene names: 157825933

Gene position: 784579-786324 (Clockwise)

Preceding gene: 157825932

Following gene: 157825943

Centisome position: 63.73

GC content: 25.54

Gene sequence:

>1746_bases
ATGCTTAAAGTAATATCAATAATTACTATTTATTTGTTATTAAGCAGCTGCTCCGAATCTACTCGTGATGCGAATGGATT
ACTTACGGATAGTCAGAGCACAGTAATTCGGAATTATATAATATCGCAAAATTCTAAAAACCTTAAAGTGCACCTTAAAG
AGAAGTTCGGTTCAAATTTAAAAGGAGTCAAATTAATAGGAGTCAAGCTAATAAATGAAGATTTATCAGGAATAGATTTA
ACTTCCTGTGAAATATTACGTGCTGATTTTGCAGGTAGTAATTTAGAAAAAGCTATACTTACAAATGCTATAATTCAAGA
AAGTAATTTTGCAGATTCGGTAATAAAAAATATTTCCGGATATAATTCTGACTTTCAAGGTTCAATTTTTAACAATGTAA
CATTACAAAATACAAATTTTGTTCGATCAAATTTTAGCGATACTGCTTTTAATAAAACTACTATAATAAATGTCAACTTT
GAAAATTCTCAATTTAGTCATGTATTATGGCGCAATAGCACCATCGATGGTGTTAATTTTCAAAAAACTAACCTAAAGAA
TAATAGCTTTAAAAATACTAATATAACAAATTCAATATTTTACGGTACGGATTTAGAAAAAAGTGTAATAAATAATACCA
ATTTTACTAATAATTATTTTGAATCTAGCGATCTAAGTCACACTAAATTAACGGCAGTAATAATTAAGGATTCTAACTTT
ACACAAAGCATTTTTAATGAAGTAAATTTTAATAACATACAAAGTCACAACTCTTTCTTTTCATACGCTTCCTTTCAAGA
TTCAACGTTACGGAATATTAGCCTTACTAAATGTGATTTACAAAATAGTACAATTAGTAGTTCAGTTTTAAATCATTTTA
AAATCGATAATGCTATATTAAATAACATGAGTCTCAACGATAACAAATTTAATAATTTATCAATAAAAAATAGTAATGCC
AATTTTGTAAGGATTAATAAAACTAAAGGCTCAAATATTACTTTAGATAATATCAGCTATACTAATAATATTTTTAGCAA
TAATGATTTTAAACAATTTATAGTGATTAATACTGACTTAAACAGCAGTGAAATAATAAACTCAAATATAACTAACGGAC
AATTTAATAATGTAAATTTTTCTAAATCTTTAATACAAAACGTAAATTTTTCAGATGTTAAAATGACTTTAGGTAATTTA
AACCAAGTAGCTCTAATAAATTCTAATCTAACAAATACTACGGTTATTAACTCCGTCCTTTCTAATTCACAAATAAATAA
TATTAACTACCAAGCATATTCCGGTTTTATTAATACTAATGTTTCTAATAATATTATTTTAAATAGCAATAATTCGAGCA
AAATTCCACCAAATAATATAGTAATAAGTTCGGTAAAAGATTTGCAAAAAATCACTAACTTAACAAATATAAATTTAACA
AATCTTGACCTAAGTAGTTTAGTATTTAATGAAACAGATTTTTCAAATAGTATCTTTAAAAATGCTAATTTAACAAATAC
GGTAATAAAGAATTCTATTTTAAAAGAAGCTAATTTTTCTACAGCAATACTTACTAAAACAGATTTCTCAAACTCAATAT
TAACAAATAGCATATTTAAATCAGCTAAAATTGATCGGGCAGGCTTTAATAACTCTGACCTAACAAATGCTGATTTTACC
GAAGCAACAATTAAAGATACTTCATTTGATCAAGCTAAGACAAGCGGAATGAAAGGCGTAGAATAG

Upstream 100 bases:

>100_bases
GTCGGTATGGAAAGATCAGCTTTGCATCGTAAATTAAAATTATTAAGCTTACATATACCTCCTACAAATAGAATCAATGA
AGAAAAATATGAGGAAGCAA

Downstream 100 bases:

>100_bases
TTTTCAAATGCTATAAGCGATTGTAGGATTTGTGTCGCATGGCTCGGTTTCACTTCTGTCATGCCGTGGCTTGACCACAC
GGCATCCAGTTAAAAATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVHLKEKFGSNLKGVKLIGVKLINEDLSGIDL
TSCEILRADFAGSNLEKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFNNVTLQNTNFVRSNFSDTAFNKTTIINVNF
ENSQFSHVLWRNSTIDGVNFQKTNLKNNSFKNTNITNSIFYGTDLEKSVINNTNFTNNYFESSDLSHTKLTAVIIKDSNF
TQSIFNEVNFNNIQSHNSFFSYASFQDSTLRNISLTKCDLQNSTISSSVLNHFKIDNAILNNMSLNDNKFNNLSIKNSNA
NFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNVNFSKSLIQNVNFSDVKMTLGNL
NQVALINSNLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSNNSSKIPPNNIVISSVKDLQKITNLTNINLT
NLDLSSLVFNETDFSNSIFKNANLTNTVIKNSILKEANFSTAILTKTDFSNSILTNSIFKSAKIDRAGFNNSDLTNADFT
EATIKDTSFDQAKTSGMKGVE

Sequences:

>Translated_581_residues
MLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVHLKEKFGSNLKGVKLIGVKLINEDLSGIDL
TSCEILRADFAGSNLEKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFNNVTLQNTNFVRSNFSDTAFNKTTIINVNF
ENSQFSHVLWRNSTIDGVNFQKTNLKNNSFKNTNITNSIFYGTDLEKSVINNTNFTNNYFESSDLSHTKLTAVIIKDSNF
TQSIFNEVNFNNIQSHNSFFSYASFQDSTLRNISLTKCDLQNSTISSSVLNHFKIDNAILNNMSLNDNKFNNLSIKNSNA
NFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNVNFSKSLIQNVNFSDVKMTLGNL
NQVALINSNLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSNNSSKIPPNNIVISSVKDLQKITNLTNINLT
NLDLSSLVFNETDFSNSIFKNANLTNTVIKNSILKEANFSTAILTKTDFSNSILTNSIFKSAKIDRAGFNNSDLTNADFT
EATIKDTSFDQAKTSGMKGVE
>Mature_581_residues
MLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVHLKEKFGSNLKGVKLIGVKLINEDLSGIDL
TSCEILRADFAGSNLEKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFNNVTLQNTNFVRSNFSDTAFNKTTIINVNF
ENSQFSHVLWRNSTIDGVNFQKTNLKNNSFKNTNITNSIFYGTDLEKSVINNTNFTNNYFESSDLSHTKLTAVIIKDSNF
TQSIFNEVNFNNIQSHNSFFSYASFQDSTLRNISLTKCDLQNSTISSSVLNHFKIDNAILNNMSLNDNKFNNLSIKNSNA
NFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNVNFSKSLIQNVNFSDVKMTLGNL
NQVALINSNLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSNNSSKIPPNNIVISSVKDLQKITNLTNINLT
NLDLSSLVFNETDFSNSIFKNANLTNTVIKNSILKEANFSTAILTKTDFSNSILTNSIFKSAKIDRAGFNNSDLTNADFT
EATIKDTSFDQAKTSGMKGVE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 64528; Mature: 64528

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVHLKEKFGSNL
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEHHHCCCC
KGVKLIGVKLINEDLSGIDLTSCEILRADFAGSNLEKAILTNAIIQESNFADSVIKNISG
CCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
YNSDFQGSIFNNVTLQNTNFVRSNFSDTAFNKTTIINVNFENSQFSHVLWRNSTIDGVNF
CCCCCCCCEECCEEEECCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCE
QKTNLKNNSFKNTNITNSIFYGTDLEKSVINNTNFTNNYFESSDLSHTKLTAVIIKDSNF
EECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TQSIFNEVNFNNIQSHNSFFSYASFQDSTLRNISLTKCDLQNSTISSSVLNHFKIDNAIL
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHH
NNMSLNDNKFNNLSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDL
CCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEEEEEEECCC
NSSEIINSNITNGQFNNVNFSKSLIQNVNFSDVKMTLGNLNQVALINSNLTNTTVINSVL
CCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHH
SNSQINNINYQAYSGFINTNVSNNIILNSNNSSKIPPNNIVISSVKDLQKITNLTNINLT
CCCCCCCCEEEEEECEEECCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEE
NLDLSSLVFNETDFSNSIFKNANLTNTVIKNSILKEANFSTAILTKTDFSNSILTNSIFK
CCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
SAKIDRAGFNNSDLTNADFTEATIKDTSFDQAKTSGMKGVE
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVHLKEKFGSNL
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEHHHCCCC
KGVKLIGVKLINEDLSGIDLTSCEILRADFAGSNLEKAILTNAIIQESNFADSVIKNISG
CCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
YNSDFQGSIFNNVTLQNTNFVRSNFSDTAFNKTTIINVNFENSQFSHVLWRNSTIDGVNF
CCCCCCCCEECCEEEECCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCE
QKTNLKNNSFKNTNITNSIFYGTDLEKSVINNTNFTNNYFESSDLSHTKLTAVIIKDSNF
EECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TQSIFNEVNFNNIQSHNSFFSYASFQDSTLRNISLTKCDLQNSTISSSVLNHFKIDNAIL
HHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCHHHH
NNMSLNDNKFNNLSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDL
CCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEEEEEEECCC
NSSEIINSNITNGQFNNVNFSKSLIQNVNFSDVKMTLGNLNQVALINSNLTNTTVINSVL
CCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHH
SNSQINNINYQAYSGFINTNVSNNIILNSNNSSKIPPNNIVISSVKDLQKITNLTNINLT
CCCCCCCCEEEEEECEEECCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEE
NLDLSSLVFNETDFSNSIFKNANLTNTVIKNSILKEANFSTAILTKTDFSNSILTNSIFK
CCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
SAKIDRAGFNNSDLTNADFTEATIKDTSFDQAKTSGMKGVE
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA