| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is glnG [C]
Identifier: 157825932
GI number: 157825932
Start: 783159
End: 784586
Strand: Direct
Name: glnG [C]
Synonym: A1C_04360
Alternate gene names: 157825932
Gene position: 783159-784586 (Clockwise)
Preceding gene: 157825924
Following gene: 157825933
Centisome position: 63.62
GC content: 31.44
Gene sequence:
>1428_bases ATGTCACAACTAGATGTTTTAATAGTAGATGATGAAGAAAGTATACGAAATCTCATTGCTGCAAATTTGAAAGATGAAGG TTTTAATCCTAAGGTTGCCGCTAATAGTACTCAAGCTCTTAAAATACTTTCCGCGAAACCGGTCTCTGCAGTGATACTTG ATATTTGGCTTCAAGGAAGCGAAATTGACGGTCTTGGGATTTTAGAGATAATTAAAAAACGCTATCCTTTAATGCCCGTA ATAATTATTAGCGGTCACGGTACTATAGAAACAGCAGTAAATGCTATAAAAATGGGTGCTTACGATTATATAGAAAAACC TTTTAATAATGATAAATTAGTTATTTTACTTAAAAGAGCTTGCGAAGTAACAAAGTTAAAACGTGAAAATATAGATTTAA AATCAAAAGTTATAGATAAAACTGAATTAGTAGGCGAATGTGCGGTAACTTTAAAATATAAAATGGAAATAGAAAAGGCA GCTAGCTCTAGCAGTCGTATAATGATTCACGGTAAAGTCGGTAGCGGTAAAGAACTTGCAGCAAGGTTAATTCATAAACA ATCTAAAAGAGTTAATAATCCGTTCATTATTTTCAGCCCTACCTGTATGACTACAGAAAAAATTAATCAAGAATTATTCG GCGAATTTGCAAAGCAGGAAAATAATAATAAACGCCCTACTATCTTAGCATTTGCTAATAACGGTACTTTATATATAGAT GAGGTCAGTAGTATTCCTATGCCCATCCAGGTAAAATTATTAAAATTCCTTAAAGATCAGACTATTACAAAGCCTTGTGG AAAAACTATTAAAGTTGATATAAAAATTATCACAGGTACTTCTAAAAATATTCAAGATGAAGTTAATAATGGCAAATTCC TAGAAGATCTATATTATCGCCTTAATGTATCCTCTCTAAAAGTACCCTCATTATATGAGAGAAAAGAAGATATACCGCTA CTAGTTAAATATTTTGTTAAACAGCTTTCAAAATTTTCAGGTTTAAAAGAACGTAACTTTGCTGATGAAACTATCGCTGC TCTTCAATCCTATGAATGGCCGGGTAATATCAGACAATTACGTAATGTAGTTGAATGGACTTTGATTATGAATCCATTAA CTGTAGGTAATAATGAAATTATCAAACCTTATATGATACCTTCCGAAATATTAGCAAATAGTGCTAATCTCACAAAACTT GAAGATAGTTTTGATATGTTATCTATGCCACTTAGAGAGGCTAGAGAAGTTTTTGAACGTCAATATCTATCGGCACAAAT GAGTCGTTTTAATAATAATATTTCAAAAACATCCTCATTTGTCGGTATGGAAAGATCAGCTTTGCATCGTAAATTAAAAT TATTAAGCTTACATATACCTCCTACAAATAGAATCAATGAAGAAAAATATGAGGAAGCAAATGCTTAA
Upstream 100 bases:
>100_bases CTATTGTGACAAAAATGTTATAAAAAAATGTTGCTTTCTTTTACATTCAGCATTAACGTATATATTTAGGCTTTGATTAA TATTTGTAAGGTAAATTGTA
Downstream 100 bases:
>100_bases AGTAATATCAATAATTACTATTTATTTGTTATTAAGCAGCTGCTCCGAATCTACTCGTGATGCGAATGGATTACTTACGG ATAGTCAGAGCACAGTAATT
Product: nitrogen assimilation regulatory protein NtrX
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSAKPVSAVILDIWLQGSEIDGLGILEIIKKRYPLMPV IIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKRACEVTKLKRENIDLKSKVIDKTELVGECAVTLKYKMEIEKA ASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGEFAKQENNNKRPTILAFANNGTLYID EVSSIPMPIQVKLLKFLKDQTITKPCGKTIKVDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKEDIPL LVKYFVKQLSKFSGLKERNFADETIAALQSYEWPGNIRQLRNVVEWTLIMNPLTVGNNEIIKPYMIPSEILANSANLTKL EDSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEKYEEANA
Sequences:
>Translated_475_residues MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSAKPVSAVILDIWLQGSEIDGLGILEIIKKRYPLMPV IIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKRACEVTKLKRENIDLKSKVIDKTELVGECAVTLKYKMEIEKA ASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGEFAKQENNNKRPTILAFANNGTLYID EVSSIPMPIQVKLLKFLKDQTITKPCGKTIKVDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKEDIPL LVKYFVKQLSKFSGLKERNFADETIAALQSYEWPGNIRQLRNVVEWTLIMNPLTVGNNEIIKPYMIPSEILANSANLTKL EDSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEKYEEANA >Mature_474_residues SQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSAKPVSAVILDIWLQGSEIDGLGILEIIKKRYPLMPVI IISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKRACEVTKLKRENIDLKSKVIDKTELVGECAVTLKYKMEIEKAA SSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGEFAKQENNNKRPTILAFANNGTLYIDE VSSIPMPIQVKLLKFLKDQTITKPCGKTIKVDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKEDIPLL VKYFVKQLSKFSGLKERNFADETIAALQSYEWPGNIRQLRNVVEWTLIMNPLTVGNNEIIKPYMIPSEILANSANLTKLE DSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEKYEEANA
Specific function: Member of the two-component regulatory system RBE_0312/RBE_0470 [H]
COG id: COG2204
COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 sigma-54 factor interaction domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=473, Percent_Identity=32.1353065539112, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1788550, Length=458, Percent_Identity=32.7510917030568, Blast_Score=237, Evalue=9e-64, Organism=Escherichia coli, GI1790437, Length=454, Percent_Identity=31.9383259911894, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI1788905, Length=459, Percent_Identity=30.2832244008715, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI1789233, Length=322, Percent_Identity=35.4037267080745, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI87082152, Length=328, Percent_Identity=28.6585365853659, Blast_Score=161, Evalue=7e-41, Organism=Escherichia coli, GI87082117, Length=313, Percent_Identity=30.6709265175719, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1789087, Length=438, Percent_Identity=28.0821917808219, Blast_Score=148, Evalue=7e-37, Organism=Escherichia coli, GI1786524, Length=335, Percent_Identity=29.2537313432836, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI1787583, Length=326, Percent_Identity=29.7546012269939, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI87081872, Length=335, Percent_Identity=29.8507462686567, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI87081858, Length=307, Percent_Identity=28.9902280130293, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789828, Length=219, Percent_Identity=30.5936073059361, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789809, Length=113, Percent_Identity=30.9734513274336, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011006 - InterPro: IPR009057 - InterPro: IPR002197 - InterPro: IPR002078 - InterPro: IPR001789 [H]
Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]
EC number: NA
Molecular weight: Translated: 53713; Mature: 53582
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSAKPVSAVILDIWLQGS CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEECCCCHHEEEECCCCHHEEEEEHEECCC EIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKRA CCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEEEEHHH CEVTKLKRENIDLKSKVIDKTELVGECAVTLKYKMEIEKAASSSSRIMIHGKVGSGKELA HHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCEEEEEECCCCCHHHH ARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGEFAKQENNNKRPTILAFANNGTLYID HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEE EVSSIPMPIQVKLLKFLKDQTITKPCGKTIKVDIKIITGTSKNIQDEVNNGKFLEDLYYR ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCCHHHHHHHHH LNVSSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERNFADETIAALQSYEWPGNIRQL CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH RNVVEWTLIMNPLTVGNNEIIKPYMIPSEILANSANLTKLEDSFDMLSMPLREAREVFER HHHHHHHHEECCEEECCCCCCCCEECCHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHH QYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEKYEEANA HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHCCC >Mature Secondary Structure SQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSAKPVSAVILDIWLQGS CCEEEEEECCHHHHHHHHHHCCCCCCCCCCEECCCCHHEEEECCCCHHEEEEEHEECCC EIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKRA CCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEEEEHHH CEVTKLKRENIDLKSKVIDKTELVGECAVTLKYKMEIEKAASSSSRIMIHGKVGSGKELA HHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCEEEEEECCCCCHHHH ARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGEFAKQENNNKRPTILAFANNGTLYID HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEE EVSSIPMPIQVKLLKFLKDQTITKPCGKTIKVDIKIITGTSKNIQDEVNNGKFLEDLYYR ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCCHHHHHHHHH LNVSSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERNFADETIAALQSYEWPGNIRQL CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH RNVVEWTLIMNPLTVGNNEIIKPYMIPSEILANSANLTKLEDSFDMLSMPLREAREVFER HHHHHHHHEECCEEECCCCCCCCEECCHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHH QYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEKYEEANA HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA