| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is xanP [H]
Identifier: 157373104
GI number: 157373104
Start: 5397825
End: 5399225
Strand: Direct
Name: xanP [H]
Synonym: Spro_4873
Alternate gene names: 157373104
Gene position: 5397825-5399225 (Clockwise)
Preceding gene: 157373102
Following gene: 157373105
Centisome position: 99.06
GC content: 58.03
Gene sequence:
>1401_bases ATGACCCTGCCATCCGCCGAGCTCGATGCCGCGCAAAAAACCTCTGCCACACCCCGTAACAGCGAGCTGATTTATCGCCT GGAAGACCGCCCACCTCTGCCGCAAACGCTGTTTGCCGCCGGTCAGCACCTGTTGGCAATGTTTGTTGCGGTGATCACCC CGGCGCTGTTGATTTGTCAGGCGTTAGGGTTACCGGCACAAGATACTCAGCACATTATCAGCATGTCGCTGTTTGCCTCC GGTCTGGCCTCTATCCTGCAAATTAAAACCTGGGGACCGGTCGGTTCTGGCCTGCTGTCCATTCAGGGCACCAGCTTTAA CTTTGTCTCGCCGCTGATTATGGGCGGTCTGGCGCTGAAAAACGGCGGTGCCGACGTGCCGACCATGATGGCAGCGCTAT TTGGCACGCTAATGGTCGCCTCCTGCACCGAAATCCTGTTGTCGCGCGTCCTTCACCTGGCACGCCGTATTATCACCCCG CTGGTCTCCGGCATTGTGGTGATGATTATCGGTTTATCGCTGATCCAGGTCGGGCTGACCTCCATCGGCGGCGGTTATGC TGCGATGAACGGGGGCAGCTTCGGCGCCCCTAAAAACCTGCTGCTGGCCGGTGCGGTATTATTGGTTATCATTCTGCTTA ACCGTCAGCGCAACCCCTACCTGCGCGTTGCCTCACTGGTGATTGCCATGGCGGTCGGCTATCTGCTGGCCTGGGCCATG GATATGTTGCCGCAAAGCCAACCGGCTCTCGAGACGGCAGCCATAGTCATCCCAACGCCGCTCTATTACGGTCTGGGCTT TGACTGGAACCTGCTGTTACCTCTGATGTTGATCTTTATGGTCACCTCACTGGAAACCATCGGCGATATCACCGCCACCT CGGACGTGTCGGAACAGCCGGTCAGCGGTCCGCTGTATATGAAGCGCCTGAAGGGCGGTGTGTTGGCTAACGGCCTGAAC TCGATGTTGTCGGCAGTATTCAACACCTTCCCCAACTCCTGCTTTGGTCAGAACAATGGCGTGATCCAACTGACCGGTGT TGCCAGCCGCTATGTAGGTTTCGTGGTGGCGCTGATGCTGATCGTACTGGGGCTATTCCCGGCGGTGGCCGGTTTCGTAC AACATATTCCCGAGCCGGTCCTGGGCGGTGCAACCCTGGTGATGTTCGGCACCATCGCCGCATCTGGCGTGCGTATCGTG TCTCGCGAACGACTGAATCGCCGCGCAATCATGATTATGGCGCTGTCTCTGGCGGTGGGTATGGGCGTGTCGCAACAGCC GCTGATCCTGCAGTTCGCGCCGGACTGGCTGAAAACCCTGCTTTCCTCCGGTATTGCTGCCGGTGGCATCACCGCTATCG TGTTGAACCTGGTGTTCCCACACGAACACGAAAAGCCATAA
Upstream 100 bases:
>100_bases ACCCGGCGATAAAGCTAACATAACTTTAACGCGCAACCGTTTGCTTTTGTGGGTCAAATCATTAAAATGCCTGCTTTGCC GTTTCTGGAAATGCCACACC
Downstream 100 bases:
>100_bases TCGGCCACGCTGACAGTCAAACGGCCGCTCGCGGCCGTTTTTTTATTGCCTATCAGACCATTGCACTTGAGATGCCCGGC CAATTGCGGCATAAACAGGG
Product: uracil-xanthine permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTLPSAELDAAQKTSATPRNSELIYRLEDRPPLPQTLFAAGQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFAS GLASILQIKTWGPVGSGLLSIQGTSFNFVSPLIMGGLALKNGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITP LVSGIVVMIIGLSLIQVGLTSIGGGYAAMNGGSFGAPKNLLLAGAVLLVIILLNRQRNPYLRVASLVIAMAVGYLLAWAM DMLPQSQPALETAAIVIPTPLYYGLGFDWNLLLPLMLIFMVTSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLN SMLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVAGFVQHIPEPVLGGATLVMFGTIAASGVRIV SRERLNRRAIMIMALSLAVGMGVSQQPLILQFAPDWLKTLLSSGIAAGGITAIVLNLVFPHEHEKP
Sequences:
>Translated_466_residues MTLPSAELDAAQKTSATPRNSELIYRLEDRPPLPQTLFAAGQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFAS GLASILQIKTWGPVGSGLLSIQGTSFNFVSPLIMGGLALKNGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITP LVSGIVVMIIGLSLIQVGLTSIGGGYAAMNGGSFGAPKNLLLAGAVLLVIILLNRQRNPYLRVASLVIAMAVGYLLAWAM DMLPQSQPALETAAIVIPTPLYYGLGFDWNLLLPLMLIFMVTSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLN SMLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVAGFVQHIPEPVLGGATLVMFGTIAASGVRIV SRERLNRRAIMIMALSLAVGMGVSQQPLILQFAPDWLKTLLSSGIAAGGITAIVLNLVFPHEHEKP >Mature_465_residues TLPSAELDAAQKTSATPRNSELIYRLEDRPPLPQTLFAAGQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASG LASILQIKTWGPVGSGLLSIQGTSFNFVSPLIMGGLALKNGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITPL VSGIVVMIIGLSLIQVGLTSIGGGYAAMNGGSFGAPKNLLLAGAVLLVIILLNRQRNPYLRVASLVIAMAVGYLLAWAMD MLPQSQPALETAAIVIPTPLYYGLGFDWNLLLPLMLIFMVTSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNS MLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVAGFVQHIPEPVLGGATLVMFGTIAASGVRIVS RERLNRRAIMIMALSLAVGMGVSQQPLILQFAPDWLKTLLSSGIAAGGITAIVLNLVFPHEHEKP
Specific function: Specific, proton motive force-dependent high-affinity transporter for xanthine [H]
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Homo sapiens, GI44680148, Length=518, Percent_Identity=23.1660231660232, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI40316845, Length=518, Percent_Identity=23.1660231660232, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI1790087, Length=464, Percent_Identity=85.7758620689655, Blast_Score=776, Evalue=0.0, Organism=Escherichia coli, GI87082178, Length=445, Percent_Identity=44.9438202247191, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI87082181, Length=443, Percent_Identity=31.8284424379233, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1788843, Length=408, Percent_Identity=26.4705882352941, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081818, Length=402, Percent_Identity=24.6268656716418, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558856, Length=505, Percent_Identity=23.5643564356436, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI21356175, Length=520, Percent_Identity=22.3076923076923, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 49118; Mature: 48987
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS01116 XANTH_URACIL_PERMASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSAELDAAQKTSATPRNSELIYRLEDRPPLPQTLFAAGQHLLAMFVAVITPALLICQ CCCCCCHHCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLPAQDTQHIISMSLFASGLASILQIKTWGPVGSGLLSIQGTSFNFVSPLIMGGLALK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCHHCC NGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITPLVSGIVVMIIGLSLIQVGLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGGGYAAMNGGSFGAPKNLLLAGAVLLVIILLNRQRNPYLRVASLVIAMAVGYLLAWAM HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMLPQSQPALETAAIVIPTPLYYGLGFDWNLLLPLMLIFMVTSLETIGDITATSDVSEQP HHCCCCCCCHHHEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VSGPLYMKRLKGGVLANGLNSMLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALML CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH IVLGLFPAVAGFVQHIPEPVLGGATLVMFGTIAASGVRIVSRERLNRRAIMIMALSLAVG HHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MGVSQQPLILQFAPDWLKTLLSSGIAAGGITAIVLNLVFPHEHEKP CCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLPSAELDAAQKTSATPRNSELIYRLEDRPPLPQTLFAAGQHLLAMFVAVITPALLICQ CCCCCHHCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGLPAQDTQHIISMSLFASGLASILQIKTWGPVGSGLLSIQGTSFNFVSPLIMGGLALK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCHHCC NGGADVPTMMAALFGTLMVASCTEILLSRVLHLARRIITPLVSGIVVMIIGLSLIQVGLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGGGYAAMNGGSFGAPKNLLLAGAVLLVIILLNRQRNPYLRVASLVIAMAVGYLLAWAM HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMLPQSQPALETAAIVIPTPLYYGLGFDWNLLLPLMLIFMVTSLETIGDITATSDVSEQP HHCCCCCCCHHHEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VSGPLYMKRLKGGVLANGLNSMLSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALML CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH IVLGLFPAVAGFVQHIPEPVLGGATLVMFGTIAASGVRIVSRERLNRRAIMIMALSLAVG HHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH MGVSQQPLILQFAPDWLKTLLSSGIAAGGITAIVLNLVFPHEHEKP CCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]