| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ygiN [H]
Identifier: 157372494
GI number: 157372494
Start: 4725388
End: 4725696
Strand: Direct
Name: ygiN [H]
Synonym: Spro_4261
Alternate gene names: 157372494
Gene position: 4725388-4725696 (Clockwise)
Preceding gene: 157372493
Following gene: 157372501
Centisome position: 86.72
GC content: 53.72
Gene sequence:
>309_bases ATGATCACCGTAATTGCAGAAATCAAAACCAAACCGGGCCACCGTGAAACGGTCCTGAAGGCGATTGAGAAACTGATCCC GCTGGTGCTGGCAGAAGACGGCTGTAGCGAATATACGCCGATGATCGACAGCCACACCCAGGCACCCTGGCAAAAACTGT CGCCGGACTCGGTGTTTATGCTGGAAAAATGGGCCAGCCAGGCGCACCTGGAAAAACATCTGGATATCGCTCACATGCAT CGGCATCGTGACACCATCAAGGACAGCGTACTGGGCGTGACCATTCACGTACTGGGTAACGCACTGTAA
Upstream 100 bases:
>100_bases TAAACAACCGGATATCGACAGCGACATCGCACGTTATCGCGAGCATCTGGCCGAAATTTTTGCTTAACTGGCACTATGCA CGTCAATCAATGAGGTAGTG
Downstream 100 bases:
>100_bases TGCCTGTCGATCTCTAAAGCATCTGCGCATCAATATGCGCGCTGACGTAGTCCAGGAAACAGGTAATACGCGCCGCCAGC TGGGTATTGCGGTAATAGAC
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: QuMo [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH RHRDTIKDSVLGVTIHVLGNAL
Sequences:
>Translated_102_residues MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH RHRDTIKDSVLGVTIHVLGNAL >Mature_102_residues MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH RHRDTIKDSVLGVTIHVLGNAL
Specific function: Can oxidize menadiol to menadione [H]
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789407, Length=100, Percent_Identity=46, Blast_Score=100, Evalue=2e-23,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 11483; Mature: 11483
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFM CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH LEKWASQAHLEKHLDIAHMHRHRDTIKDSVLGVTIHVLGNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFM CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH LEKWASQAHLEKHLDIAHMHRHRDTIKDSVLGVTIHVLGNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]