Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is nagD [C]

Identifier: 157372299

GI number: 157372299

Start: 4505384

End: 4506190

Strand: Direct

Name: nagD [C]

Synonym: Spro_4065

Alternate gene names: 157372299

Gene position: 4505384-4506190 (Clockwise)

Preceding gene: 157372288

Following gene: 157372300

Centisome position: 82.68

GC content: 42.63

Gene sequence:

>807_bases
ATGAAAAGAGATAAAAAGTGCCTTGCCTGTGTGGATGAATTGCCTGTATTCGAAGGTTATCTCGTAGACGTCTGGGGTGT
CTTATACGATGGTCAGTCGAAAACTCATATTGCTGATGATCTGCTCCGGAAAATGAAAATGCATGGCCGGCTCGCACTCG
TGAGCAATACCTCTCGCTCGTCGGAAGAGCTGGCTGTTTTACTGAGTGATAAAGGGATTTCAGAAACATTTATTGATGGA
ATTTTCACGTCCGGAAGCCTGTGCAAAGAACGAATTACTCGCCATTTCGCAACCAATCCACAACACACTTTCATCCTAGT
GGGCACCGCCGGTGAATGCCACTGGCTCACTACGATGTTAGATCGACAAGTCTCTTCTATCGAAGCATGTGATTTTGTTA
TTGCTGCAAACATCATTTATGAAAAGGATGAAGAGGTCGAAAGGTTAGTAAGAAAAATCATAGAAAGAGGGTTGATCGTA
TATTCAACGAATCCGGATAAATTTGTCAATATTGGAGGTCGTATTCATAAGGCTGCGGGGTACTTCTGTCAAAAAGTGAG
AGAAGCCGGTGGTACCGTTTACGAGTATGGCAAACCTAATGTGGATATTTTTAATATCGCATTGGCAGGGATTGGTGTGA
AAAAAGAAAATGCCTGCATGTTGGGGGATTCGCTAGAAACGGATATTTTTGGAGGAAACTCTGCATCACTTAAAACCATA
CTGGTCGCTGGATGTGGTGGTTTGCAGTATAGCGAAGATGAATTAAATGAAGGGTTGCATGATTATATTCTAAATCTACA
GGGGTGA

Upstream 100 bases:

>100_bases
AAAAAACACTTCCCATACACGATATGTGCTGCTACATATTTAAGCATAATTTACATATAAATAAACGAGAATGATTTTCA
ACTCCATGAATGGATGCATG

Downstream 100 bases:

>100_bases
TTATGTATAAGGTGCTTATCATTGGTTCAGGTGTCCTTTCTACGATGGTTTCAGAGATGTTGGCCTGGAGAAATTTTCCG
TGCCAGGTAACGATTGCTGC

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD Superfamily Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; HAD Family Sugar Phosphatase; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Sugar Phosphatase Of HAD Superfamily; HAD-Superfamily Subfamily IIA Hydrolase TIGR; Sugar Phosphatase; Sugar Phosphatase/Hydrolase; Hydrolase IIA; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG
IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV
YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI
LVAGCGGLQYSEDELNEGLHDYILNLQG

Sequences:

>Translated_268_residues
MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG
IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV
YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI
LVAGCGGLQYSEDELNEGLHDYILNLQG
>Mature_268_residues
MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG
IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV
YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI
LVAGCGGLQYSEDELNEGLHDYILNLQG

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29592; Mature: 29592

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRS
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
SEELAVLLSDKGISETFIDGIFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTML
CCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
DRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIVYSTNPDKFVNIGGRIHKAAG
HHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHH
YFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI
HHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEE
LVAGCGGLQYSEDELNEGLHDYILNLQG
EEECCCCCCCCHHHHHCCHHHHHEECCC
>Mature Secondary Structure
MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRS
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
SEELAVLLSDKGISETFIDGIFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTML
CCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
DRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIVYSTNPDKFVNIGGRIHKAAG
HHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHH
YFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI
HHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEE
LVAGCGGLQYSEDELNEGLHDYILNLQG
EEECCCCCCCCHHHHHCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA