| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yggX [C]
Identifier: 157372278
GI number: 157372278
Start: 4481057
End: 4481329
Strand: Direct
Name: yggX [C]
Synonym: Spro_4044
Alternate gene names: 157372278
Gene position: 4481057-4481329 (Clockwise)
Preceding gene: 157372277
Following gene: 157372279
Centisome position: 82.24
GC content: 47.99
Gene sequence:
>273_bases ATGAGCAGAACCATTTTTTGTACCTTCCTGCAGCGCGACGCCGAAGGGCAGGATTTCCAGCTTTATCCAGGGGAAGTCGG CAAACGCATCTATAACGAGATCTCGAAGGAAGCCTGGGCAGAATGGATGAAAAAACAAACCATGCTGATCAACGAGAAAA AACTGAACATGATGAACGTTGATGACCGCAAACTGCTGGAAGGAGAGATGATCAAGTTCCTGTTTGAAGGGCACGACGTG CACATCGAAGGCTATACGCCACCAAGCGAATAA
Upstream 100 bases:
>100_bases GGCTGGCAGCGCCGGTTGACCGCCTGTTACAACAGTTGGCAAAACAGTCCCCGCGCCAACAGGGTTTATTTGGCGATAGA GCCATTGATGAGGAATTAGC
Downstream 100 bases:
>100_bases CGCTGTTGGGGCCAGGCGCTGGCCCTCTTCAACACTTCCCGTATACGGCTTTAAGATGAAGAAAATTTTAGCTCTGCTAG TGATAGCGCCTTTGCTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSRTIFCTFLQRDAEGQDFQLYPGEVGKRIYNEISKEAWAEWMKKQTMLINEKKLNMMNVDDRKLLEGEMIKFLFEGHDV HIEGYTPPSE
Sequences:
>Translated_90_residues MSRTIFCTFLQRDAEGQDFQLYPGEVGKRIYNEISKEAWAEWMKKQTMLINEKKLNMMNVDDRKLLEGEMIKFLFEGHDV HIEGYTPPSE >Mature_89_residues SRTIFCTFLQRDAEGQDFQLYPGEVGKRIYNEISKEAWAEWMKKQTMLINEKKLNMMNVDDRKLLEGEMIKFLFEGHDVH IEGYTPPSE
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=85.0574712643678, Blast_Score=160, Evalue=1e-41,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_SERP5 (A8GJ49)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480267.1 - ProteinModelPortal: A8GJ49 - SMR: A8GJ49 - STRING: A8GJ49 - GeneID: 5606035 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4044 - eggNOG: COG2924 - HOGENOM: HBG289800 - OMA: SKQTMLI - ProtClustDB: PRK05408 - BioCyc: SPRO399741:SPRO_4044-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10676; Mature: 10545
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIFCTFLQRDAEGQDFQLYPGEVGKRIYNEISKEAWAEWMKKQTMLINEKKLNMMNV CCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC DDRKLLEGEMIKFLFEGHDVHIEGYTPPSE CCHHHHHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure SRTIFCTFLQRDAEGQDFQLYPGEVGKRIYNEISKEAWAEWMKKQTMLINEKKLNMMNV CCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC DDRKLLEGEMIKFLFEGHDVHIEGYTPPSE CCHHHHHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA