| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372195
Identifier: 157372195
GI number: 157372195
Start: 4390025
End: 4390549
Strand: Reverse
Name: 157372195
Synonym: Spro_3961
Alternate gene names: NA
Gene position: 4390549-4390025 (Counterclockwise)
Preceding gene: 157372196
Following gene: 157372194
Centisome position: 80.58
GC content: 56.57
Gene sequence:
>525_bases ATGTCCCAGGTTGAGAAACAAGCCGGCGTCAAGCCGCAGGATCAGTCGATAGAGCATTGGGTGGAATCCCGTATCGCCCG CTTTGAAGGCCGTAAATATGACTGGAATGCGTTGAAGTTCCAGGCTGACTACGACCCGAAATACCGCCGCGCGCAGATGC GTTATATCGGCACCGGTGCCACCGGGGTGGTTAACGACACCAATACCATTCCGGCGGGCAACTTTACCTTCTCCACCATG GTGCTGCCGTCGAAATGCGAAGGCCCGCTGCATCTGCACGACGATGTGGAAGAGGTGTTCTTTATGCTGAAGGGCAGTAT CACGCTGATGATCCAGGACGGCACGGAGTACTACGAAACCAAGCTGAAAGAGCGCGATCTGATCTCGGTGCCGGCCGGTG TTTATCGTGGGTTGTTCAACCACGGCGAGGAAGAGGCACTGATGTGCGTGATGCTCGGCACGGCCAAACCGGAAACGCCG ACCTACCCGGCAGATCACCCCTTGTCCAAAGTGAAGCGTAACTGA
Upstream 100 bases:
>100_bases TTGCTGTTCCTGGTGGTAATGGCCTTTATCGGCTGCATCATTCTGCTGCCGTTGCTGAAGAAATATTGATATCCCATTGA TTGAAAAGAGGAGTACCAAC
Downstream 100 bases:
>100_bases TGAACGGCCTGGTTCAACGTCAGCAGGCGCGCTGCGGGAGTTACACCCTGAGCTGGCGTGAAGTGGGGCACGGCCGCCCG GTGGTGTTGCTGCACGGCAT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSQVEKQAGVKPQDQSIEHWVESRIARFEGRKYDWNALKFQADYDPKYRRAQMRYIGTGATGVVNDTNTIPAGNFTFSTM VLPSKCEGPLHLHDDVEEVFFMLKGSITLMIQDGTEYYETKLKERDLISVPAGVYRGLFNHGEEEALMCVMLGTAKPETP TYPADHPLSKVKRN
Sequences:
>Translated_174_residues MSQVEKQAGVKPQDQSIEHWVESRIARFEGRKYDWNALKFQADYDPKYRRAQMRYIGTGATGVVNDTNTIPAGNFTFSTM VLPSKCEGPLHLHDDVEEVFFMLKGSITLMIQDGTEYYETKLKERDLISVPAGVYRGLFNHGEEEALMCVMLGTAKPETP TYPADHPLSKVKRN >Mature_173_residues SQVEKQAGVKPQDQSIEHWVESRIARFEGRKYDWNALKFQADYDPKYRRAQMRYIGTGATGVVNDTNTIPAGNFTFSTMV LPSKCEGPLHLHDDVEEVFFMLKGSITLMIQDGTEYYETKLKERDLISVPAGVYRGLFNHGEEEALMCVMLGTAKPETPT YPADHPLSKVKRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19765; Mature: 19633
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVEKQAGVKPQDQSIEHWVESRIARFEGRKYDWNALKFQADYDPKYRRAQMRYIGTGA CCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEEEECCC TGVVNDTNTIPAGNFTFSTMVLPSKCEGPLHLHDDVEEVFFMLKGSITLMIQDGTEYYET CCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHH KLKERDLISVPAGVYRGLFNHGEEEALMCVMLGTAKPETPTYPADHPLSKVKRN HHCCCCEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure SQVEKQAGVKPQDQSIEHWVESRIARFEGRKYDWNALKFQADYDPKYRRAQMRYIGTGA CCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEEEECCC TGVVNDTNTIPAGNFTFSTMVLPSKCEGPLHLHDDVEEVFFMLKGSITLMIQDGTEYYET CCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHH KLKERDLISVPAGVYRGLFNHGEEEALMCVMLGTAKPETPTYPADHPLSKVKRN HHCCCCEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA