| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yisY [H]
Identifier: 157372194
GI number: 157372194
Start: 4389207
End: 4390025
Strand: Reverse
Name: yisY [H]
Synonym: Spro_3960
Alternate gene names: 157372194
Gene position: 4390025-4389207 (Counterclockwise)
Preceding gene: 157372195
Following gene: 157372193
Centisome position: 80.57
GC content: 63.74
Gene sequence:
>819_bases ATGAACGGCCTGGTTCAACGTCAGCAGGCGCGCTGCGGGAGTTACACCCTGAGCTGGCGTGAAGTGGGGCACGGCCGCCC GGTGGTGTTGCTGCACGGCATCAGCTCCGGTTCGGCCTCGTGGATCAAGCAGTTTAACGATCGTAGCCTGGCCGATGGTC ACCGCCTGCTGGCCTGGGATGCCCCGGGCTACGGCGGCAGCCTGCCGCTGACGGTGAACCAGCCGGATGCTACCGCTTAC GCCGCCGCGCTGGCGGCGCTGGTGGCCGAATTGCAATTGGATCAGCCGCTGATCGTCGGCCATTCGCTCGGGGCGTTGAT CGGCAGCGCCTATGCTGCGGATCATCCCGACGGCCTCTGCGGACTGATATTGGCCGATCCGGCTCAGGGTTATGCCACCG CGCCGGAAGAAAAACGCCAACAGGTTTACGGCCAGCGTAAACAGATGATTGAAACGCTGGGGCCGCAGGGCTACGGCGAA CAACGGGCGGCTGCGCTGCTGCGTGATGACGCGGATCCACAGGATATCGCCTGGGTGCGCAACGGCATGCAACAGCTCGA TCCGGAAGGTTTTCTCAGCGCCGCCTGGATGCTGGCCAACGACGATATCGGCCGCCATCTGGCGCGTTACCGTGGCCCGT TACAGGTGTGGTGCGGTGACTGTGACCGGATCACACCGCCGGAAGCGGCGGCAATACTGGCGCAGCAGCAGGACGCGCCT CTGAGGTTGATTGAGGGCGCAGGGCACGCCAGCTATCTCGATGCGCCGGAGCAATTTAACCGTTATCTGCAGGACTTTAC GGGAGCAATCCAACCATGA
Upstream 100 bases:
>100_bases GCGAGGAAGAGGCACTGATGTGCGTGATGCTCGGCACGGCCAAACCGGAAACGCCGACCTACCCGGCAGATCACCCCTTG TCCAAAGTGAAGCGTAACTG
Downstream 100 bases:
>100_bases ATTTTCAGCTTGAGCAACGGGTCGCAGTGGTCACCGGCGGTTCGTCGGGCATCGGTTTTGAGACCCTGCGCCTGCTGTTG GCGGAAGGGGCGAAGGTGGC
Product: alpha/beta hydrolase fold domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP
Sequences:
>Translated_272_residues MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP >Mature_272_residues MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787244, Length=253, Percent_Identity=25.296442687747, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 29389; Mature: 29389
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWD CCCHHHHHHHHCCCEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEC APGYGGSLPLTVNQPDATAYAAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLC CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEE GLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGEQRAAALLRDDADPQDIAWVR EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH NGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCC LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWD CCCHHHHHHHHCCCEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEC APGYGGSLPLTVNQPDATAYAAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLC CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEE GLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGEQRAAALLRDDADPQDIAWVR EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH NGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCC LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377 [H]