Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yisY [H]

Identifier: 157372194

GI number: 157372194

Start: 4389207

End: 4390025

Strand: Reverse

Name: yisY [H]

Synonym: Spro_3960

Alternate gene names: 157372194

Gene position: 4390025-4389207 (Counterclockwise)

Preceding gene: 157372195

Following gene: 157372193

Centisome position: 80.57

GC content: 63.74

Gene sequence:

>819_bases
ATGAACGGCCTGGTTCAACGTCAGCAGGCGCGCTGCGGGAGTTACACCCTGAGCTGGCGTGAAGTGGGGCACGGCCGCCC
GGTGGTGTTGCTGCACGGCATCAGCTCCGGTTCGGCCTCGTGGATCAAGCAGTTTAACGATCGTAGCCTGGCCGATGGTC
ACCGCCTGCTGGCCTGGGATGCCCCGGGCTACGGCGGCAGCCTGCCGCTGACGGTGAACCAGCCGGATGCTACCGCTTAC
GCCGCCGCGCTGGCGGCGCTGGTGGCCGAATTGCAATTGGATCAGCCGCTGATCGTCGGCCATTCGCTCGGGGCGTTGAT
CGGCAGCGCCTATGCTGCGGATCATCCCGACGGCCTCTGCGGACTGATATTGGCCGATCCGGCTCAGGGTTATGCCACCG
CGCCGGAAGAAAAACGCCAACAGGTTTACGGCCAGCGTAAACAGATGATTGAAACGCTGGGGCCGCAGGGCTACGGCGAA
CAACGGGCGGCTGCGCTGCTGCGTGATGACGCGGATCCACAGGATATCGCCTGGGTGCGCAACGGCATGCAACAGCTCGA
TCCGGAAGGTTTTCTCAGCGCCGCCTGGATGCTGGCCAACGACGATATCGGCCGCCATCTGGCGCGTTACCGTGGCCCGT
TACAGGTGTGGTGCGGTGACTGTGACCGGATCACACCGCCGGAAGCGGCGGCAATACTGGCGCAGCAGCAGGACGCGCCT
CTGAGGTTGATTGAGGGCGCAGGGCACGCCAGCTATCTCGATGCGCCGGAGCAATTTAACCGTTATCTGCAGGACTTTAC
GGGAGCAATCCAACCATGA

Upstream 100 bases:

>100_bases
GCGAGGAAGAGGCACTGATGTGCGTGATGCTCGGCACGGCCAAACCGGAAACGCCGACCTACCCGGCAGATCACCCCTTG
TCCAAAGTGAAGCGTAACTG

Downstream 100 bases:

>100_bases
ATTTTCAGCTTGAGCAACGGGTCGCAGTGGTCACCGGCGGTTCGTCGGGCATCGGTTTTGAGACCCTGCGCCTGCTGTTG
GCGGAAGGGGCGAAGGTGGC

Product: alpha/beta hydrolase fold domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY
AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE
QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP
LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP

Sequences:

>Translated_272_residues
MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY
AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE
QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP
LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP
>Mature_272_residues
MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWDAPGYGGSLPLTVNQPDATAY
AAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLCGLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGE
QRAAALLRDDADPQDIAWVRNGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP
LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787244, Length=253, Percent_Identity=25.296442687747, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29389; Mature: 29389

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWD
CCCHHHHHHHHCCCEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEC
APGYGGSLPLTVNQPDATAYAAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLC
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEE
GLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGEQRAAALLRDDADPQDIAWVR
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
NGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNGLVQRQQARCGSYTLSWREVGHGRPVVLLHGISSGSASWIKQFNDRSLADGHRLLAWD
CCCHHHHHHHHCCCEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEC
APGYGGSLPLTVNQPDATAYAAALAALVAELQLDQPLIVGHSLGALIGSAYAADHPDGLC
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEE
GLILADPAQGYATAPEEKRQQVYGQRKQMIETLGPQGYGEQRAAALLRDDADPQDIAWVR
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
NGMQQLDPEGFLSAAWMLANDDIGRHLARYRGPLQVWCGDCDRITPPEAAAILAQQQDAP
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCC
LRLIEGAGHASYLDAPEQFNRYLQDFTGAIQP
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377 [H]