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The map label for this gene is rssB [H]

Identifier: 157372144

GI number: 157372144

Start: 4328564

End: 4329223

Strand: Direct

Name: rssB [H]

Synonym: Spro_3910

Alternate gene names: 157372144

Gene position: 4328564-4329223 (Clockwise)

Preceding gene: 157372140

Following gene: 157372145

Centisome position: 79.44

GC content: 53.64

Gene sequence:

>660_bases
TTGTTAGTGGAAGACGATCTGCAATTGGGCAAGGCCCTGTGCCGGGCACTAGAACTGGCGGGTTTTGAGCTATGCTGGGT
GCGGCTGGTGCATGATGCTCAAACCAGGCTCTCACAGGGCAGTTTCGATTTAATGCTGTTAGACCTGACCCTGCCAGACG
GGGATGGATTAAAAAAACTGGTCGAGTGGCGAGCCGCCGGACAAAATATCCCGATCATTATTCTGACCGCACGCGACCGT
ATCGAAAGCCTGGTCAATAGCCTGGACTCCGGCGCGGACGACTTTCTGGCCAAACCTTTCGCCTTGCCTGAGTTGATATC
CCGCGTGAAGGCGGTGAACCGCCGCATGGCCGGGTTTGCCTCCCAAACCTGGAGCCTGGGCAATCTGTATCTGGACCCAA
TTAATCACCAGGTGACGCTGGATGACGAACTTCTGCTGTTATCGAAAAAGGAGTATCGGCTGCTGCATGAACTGATGCGC
TGCGCCGGCACCGTGGTGCGTAAAACCGCACTGGAGCAGAGTCTGTTCGGCCATGGCGACAGCGTGGAAAGTAATTCTCT
GGAGGTGCATATGCATAACTTGCGGCGCAAGATTGGCAAGGAAAAAATTATCACCGTGCGTGGCATCGGTTATTTATTAA
AAAAAGAGACTCTGGGATGA

Upstream 100 bases:

>100_bases
GAACGATGGTGCAAAAAGGATGACGCCGTTGTCTTCCCATGAGGGTTGTAGTTATATAGCCGCCAGCGTCGTGACATAAA
CCGGATACCCCGTGAACATA

Downstream 100 bases:

>100_bases
TAAGTTTTAAATCCTTTTTTATGCGCACCATTATTTTCCAGGTTTTAGCTATATTATTGCTCTGGGGCGCATTGATTGGT
TGGGTAAAATATTCATATTA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLVEDDLQLGKALCRALELAGFELCWVRLVHDAQTRLSQGSFDLMLLDLTLPDGDGLKKLVEWRAAGQNIPIIILTARDR
IESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFASQTWSLGNLYLDPINHQVTLDDELLLLSKKEYRLLHELMR
CAGTVVRKTALEQSLFGHGDSVESNSLEVHMHNLRRKIGKEKIITVRGIGYLLKKETLG

Sequences:

>Translated_219_residues
MLVEDDLQLGKALCRALELAGFELCWVRLVHDAQTRLSQGSFDLMLLDLTLPDGDGLKKLVEWRAAGQNIPIIILTARDR
IESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFASQTWSLGNLYLDPINHQVTLDDELLLLSKKEYRLLHELMR
CAGTVVRKTALEQSLFGHGDSVESNSLEVHMHNLRRKIGKEKIITVRGIGYLLKKETLG
>Mature_219_residues
MLVEDDLQLGKALCRALELAGFELCWVRLVHDAQTRLSQGSFDLMLLDLTLPDGDGLKKLVEWRAAGQNIPIIILTARDR
IESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFASQTWSLGNLYLDPINHQVTLDDELLLLSKKEYRLLHELMR
CAGTVVRKTALEQSLFGHGDSVESNSLEVHMHNLRRKIGKEKIITVRGIGYLLKKETLG

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=213, Percent_Identity=44.131455399061, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1790552, Length=213, Percent_Identity=41.7840375586854, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=35.3211009174312, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1786599, Length=218, Percent_Identity=33.9449541284404, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI87082012, Length=215, Percent_Identity=33.953488372093, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=32.8767123287671, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=30.316742081448, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.1111111111111, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=33.7719298245614, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788394, Length=219, Percent_Identity=31.5068493150685, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=28.6363636363636, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787229, Length=192, Percent_Identity=30.7291666666667, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=29.5652173913043, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788550, Length=210, Percent_Identity=25.7142857142857, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=23.8938053097345, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24543; Mature: 24543

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVEDDLQLGKALCRALELAGFELCWVRLVHDAQTRLSQGSFDLMLLDLTLPDGDGLKKL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
VEWRAAGQNIPIIILTARDRIESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFA
HHHHHCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SQTWSLGNLYLDPINHQVTLDDELLLLSKKEYRLLHELMRCAGTVVRKTALEQSLFGHGD
HCCCCCCCEEECCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVESNSLEVHMHNLRRKIGKEKIITVRGIGYLLKKETLG
CCCCCCHHHHHHHHHHHHCHHHEEEEECHHHHHHHCCCC
>Mature Secondary Structure
MLVEDDLQLGKALCRALELAGFELCWVRLVHDAQTRLSQGSFDLMLLDLTLPDGDGLKKL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
VEWRAAGQNIPIIILTARDRIESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFA
HHHHHCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SQTWSLGNLYLDPINHQVTLDDELLLLSKKEYRLLHELMRCAGTVVRKTALEQSLFGHGD
HCCCCCCCEEECCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVESNSLEVHMHNLRRKIGKEKIITVRGIGYLLKKETLG
CCCCCCHHHHHHHHHHHHCHHHEEEEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA