| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is srmB [H]
Identifier: 157371914
GI number: 157371914
Start: 4071880
End: 4073205
Strand: Direct
Name: srmB [H]
Synonym: Spro_3679
Alternate gene names: 157371914
Gene position: 4071880-4073205 (Clockwise)
Preceding gene: 157371912
Following gene: 157371918
Centisome position: 74.73
GC content: 57.54
Gene sequence:
>1326_bases ATGACAGTAACCAATTTTTCCGAGCTCGAACTCGATGAACGCCTGATAAACGCCCTGCGTGATAAAGGCTACGAACGCCC AACCGCCATTCAAGCCGAGGCGATCCCGCCTGCGATGGATGGGCGCGACGTATTGGGTTCGGCGCCGACCGGCACCGGCA AGACCGCTGCATTTTTGCTGCCGGTATTGCAACATCTGCTCGACTTCCCACGCAAGAAGTCCGGCCCACCGCGCGTACTG ATCCTGACCCCGACACGCGAGCTGGCGATGCAGGTAGCCGATCAGGCACGTGAACTGGCTGCTCATACTTCGCTGGATAT CGCTACCATCACCGGTGGCGTTGCCTATATGAACCACGCGGAAGTCTTCAGCGAAAACCAGGACGTGGTCGTTGCCACTA CCGGTCGTTTGCTGCAGTACATTAAAGAAGAAAACTTCGACTGCCGCGCGGTAGAAACGCTGATCCTTGATGAAGCCGAC CGTATGCTGGACATGGGCTTCGCGCAGGACATCGAAACTATTTCCGCCGAAACCCGCTGGCGGAACCAGACCCTGCTGTT CTCCGCGACGCTGGAAGGTGATGCCATCCGCGAGTTCGCCGAACGCATTCTGAAAGAGCCGGTAGAAGTCGAAGCTGACC CGTCACGCCGTGAACGCAAAAAGATCCTGCAGTGGTACTACCGCGCCGACGACGTGGTGCATAAAACCGCCCTGCTGGTG CATTTGCTGAAACAACCGGACGTGCAGAAATCCGTAATCTTCGTGCGTAAGCGTGAGCGCGTGCATGAGCTGGCAGCCTG GCTGCGCGAGGCCGGTATCAATACCTGTTACCTCGAAGGCGAAATGGTGCAGGCCAAGCGTAACGAAGCGGTAAAACGCA TGATGGATGGCCGTGTCAACGTACTGGTCGCCACCGACGTTGCTGCCCGTGGCCTGGATATCCTGGATATCACCCACGTA TTCAACTTCGACATGCCGCGCACGGCGGATACCTACCTGCACCGCATCGGCCGTACCGGTCGTGCCGGGCGTAAAGGCAC CGCGATCTCGCTGGTTGAGGCACACGACCACCTGCTGTTGGGCAAAGTAGGCCGTTACCTGAACGAGCCGCTGAAAGCGC GGGTGATCGAAGAGCTGCGTCCGTCAACCAAAGTACCGAGCGAAAAAAGCAACGGCAAGCCTTCCAAGAAGGTGATTGCC AAACGCGCAGCCGACAAAGAAAAGAACAAAGAAAAAGCCAAGGTGAAAGTACGTCATCGCGATGCGAAAAACGTGGGCAA ACGTCGCCAGCCGAAGGCCAAACCTGAGAGCAACGGCGCGAAGTAA
Upstream 100 bases:
>100_bases TAAGGCAATCTGATTTTTGGGAAAAGAGATGCTTTCCGCTTAAATAGGTGAAGAACGCGGCCAACCCGTCTATAATCGGC GCCCCAAGTAGAGGTAGACC
Downstream 100 bases:
>100_bases TGCTGCCGTAGTGAATAAAAACCGCCTCCATTAACCTGAAGGCGGTTTTTTTATGCCCGCTTACTGCTGCGCGTAATGCG TTGCCTGCTGATGGGCTTTC
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLLPVLQHLLDFPRKKSGPPRVL ILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETISAETRWRNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLV HLLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVNVLVATDVAARGLDILDITHV FNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLLGKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIA KRAADKEKNKEKAKVKVRHRDAKNVGKRRQPKAKPESNGAK
Sequences:
>Translated_441_residues MTVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLLPVLQHLLDFPRKKSGPPRVL ILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIETISAETRWRNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLV HLLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVNVLVATDVAARGLDILDITHV FNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLLGKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIA KRAADKEKNKEKAKVKVRHRDAKNVGKRRQPKAKPESNGAK >Mature_440_residues TVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLLPVLQHLLDFPRKKSGPPRVLI LTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADR MLDMGFAQDIETISAETRWRNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLVH LLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVNVLVATDVAARGLDILDITHVF NFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLLGKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIAK RAADKEKNKEKAKVKVRHRDAKNVGKRRQPKAKPESNGAK
Specific function: RNA-dependent ATPase activity. Acts in 50S ribosomal subunit biogenesis at low temperatures, acting before DeaD/CsdA. Suppressor of a mutant defective in 50S ribosomal subunit assembly. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=378, Percent_Identity=37.5661375661376, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI45446743, Length=378, Percent_Identity=37.5661375661376, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=36, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=35.8695652173913, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=37.5, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=36.4829396325459, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=36.4829396325459, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI262118318, Length=404, Percent_Identity=34.9009900990099, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI216548263, Length=405, Percent_Identity=34.8148148148148, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI262231852, Length=405, Percent_Identity=34.8148148148148, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13518015, Length=374, Percent_Identity=35.2941176470588, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI21071032, Length=364, Percent_Identity=35.7142857142857, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI188035877, Length=372, Percent_Identity=35.2150537634409, Blast_Score=208, Evalue=6e-54, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=34.180790960452, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=34.0782122905028, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=34.0782122905028, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=34.2618384401114, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=34.6590909090909, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI41327771, Length=421, Percent_Identity=30.166270783848, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=33.4239130434783, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=32.967032967033, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=34.2618384401114, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=35.3107344632768, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=31.7934782608696, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=33.8068181818182, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=33.8068181818182, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=32.6815642458101, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=32.6683291770574, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=33.4239130434783, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=33.4239130434783, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=32.9758713136729, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=32.9758713136729, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=32.9758713136729, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI13129006, Length=368, Percent_Identity=32.6086956521739, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI38569505, Length=369, Percent_Identity=32.520325203252, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI38569503, Length=369, Percent_Identity=32.520325203252, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=31.5926892950392, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=31.331592689295, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI38327634, Length=347, Percent_Identity=33.1412103746398, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI50659095, Length=376, Percent_Identity=32.1808510638298, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=31.5217391304348, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=31.767955801105, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=30.1075268817204, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=30.2387267904509, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=31.6715542521994, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=33.1476323119777, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=29.1358024691358, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI256223453, Length=357, Percent_Identity=28.8515406162465, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI154759257, Length=405, Percent_Identity=27.9012345679012, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=30, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=31.0526315789474, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=27.2455089820359, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=33.6363636363636, Blast_Score=105, Evalue=7e-23, Organism=Escherichia coli, GI1788930, Length=434, Percent_Identity=81.7972350230415, Blast_Score=693, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=365, Percent_Identity=43.8356164383562, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=38.60103626943, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=39.2156862745098, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=37.7840909090909, Blast_Score=198, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17552642, Length=373, Percent_Identity=39.4101876675603, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17555296, Length=353, Percent_Identity=37.1104815864023, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=36.5853658536585, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=36.745406824147, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=36.0526315789474, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=32.75, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=36.3128491620112, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71999646, Length=371, Percent_Identity=35.3099730458221, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17507945, Length=391, Percent_Identity=35.2941176470588, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=33.879781420765, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=33.6065573770492, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17507881, Length=382, Percent_Identity=33.2460732984293, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI32565321, Length=418, Percent_Identity=31.5789473684211, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=32.5136612021858, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=34.8314606741573, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=31.989247311828, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=31.989247311828, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=31.989247311828, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=34.1463414634146, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.7204301075269, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=378, Percent_Identity=32.8042328042328, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI115532546, Length=390, Percent_Identity=35.1282051282051, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532548, Length=395, Percent_Identity=34.6835443037975, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=32.3863636363636, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=33.9572192513369, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=30.4239401496259, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17505370, Length=360, Percent_Identity=33.0555555555556, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=26.1390887290168, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193208216, Length=424, Percent_Identity=30.6603773584906, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI32564046, Length=388, Percent_Identity=30.6701030927835, Blast_Score=160, Evalue=9e-40, Organism=Caenorhabditis elegans, GI193206561, Length=353, Percent_Identity=29.4617563739377, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17508543, Length=383, Percent_Identity=28.4595300261097, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17556951, Length=349, Percent_Identity=32.0916905444126, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=29.6103896103896, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=29.6103896103896, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=29.5629820051414, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17553716, Length=348, Percent_Identity=27.5862068965517, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17557982, Length=386, Percent_Identity=28.4974093264249, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI25148205, Length=344, Percent_Identity=24.7093023255814, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71982862, Length=218, Percent_Identity=30.2752293577982, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=24.1791044776119, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17566630, Length=330, Percent_Identity=26.6666666666667, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=41.5730337078652, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=38.135593220339, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=34.5205479452055, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=368, Percent_Identity=35.054347826087, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321856, Length=397, Percent_Identity=34.2569269521411, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321360, Length=372, Percent_Identity=36.5591397849462, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6325138, Length=385, Percent_Identity=34.8051948051948, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6324778, Length=387, Percent_Identity=32.5581395348837, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320224, Length=380, Percent_Identity=31.3157894736842, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=354, Percent_Identity=34.4632768361582, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=354, Percent_Identity=34.4632768361582, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=387, Percent_Identity=33.0749354005168, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=34.9030470914127, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=403, Percent_Identity=31.7617866004963, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=32.2128851540616, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=34.4, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=423, Percent_Identity=28.6052009456265, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.1927710843373, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=29.6587926509186, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=427, Percent_Identity=29.5081967213115, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=364, Percent_Identity=31.5934065934066, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=351, Percent_Identity=30.7692307692308, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=371, Percent_Identity=30.4582210242588, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320173, Length=243, Percent_Identity=34.9794238683128, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=25.9887005649718, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=37.1352785145889, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=38.9645776566758, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.135593220339, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=37.4647887323944, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24585582, Length=374, Percent_Identity=35.2941176470588, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=33.4254143646409, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=33.4254143646409, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=33.7837837837838, Blast_Score=214, Evalue=6e-56, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=34.6049046321526, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=34.6049046321526, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21355075, Length=346, Percent_Identity=35.8381502890173, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=33.695652173913, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=34.5303867403315, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=35.9459459459459, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=33.0601092896175, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=34.3163538873995, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI24584994, Length=389, Percent_Identity=31.3624678663239, Blast_Score=201, Evalue=8e-52, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=33.2386363636364, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=33.2386363636364, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=33.2386363636364, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.5384615384615, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24642822, Length=388, Percent_Identity=30.9278350515464, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17136814, Length=385, Percent_Identity=32.4675324675325, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24643725, Length=408, Percent_Identity=30.8823529411765, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=31.5217391304348, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=31.5217391304348, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=31.5217391304348, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=31.5217391304348, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571808, Length=375, Percent_Identity=31.7333333333333, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI28571809, Length=375, Percent_Identity=31.7333333333333, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=31.5186246418338, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI17647335, Length=362, Percent_Identity=29.2817679558011, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI20130173, Length=427, Percent_Identity=27.6346604215457, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI19920478, Length=368, Percent_Identity=30.7065217391304, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=27.6381909547739, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI21355559, Length=388, Percent_Identity=30.4123711340206, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24640164, Length=384, Percent_Identity=26.5625, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18859659, Length=205, Percent_Identity=28.780487804878, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI28571338, Length=205, Percent_Identity=28.780487804878, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49570; Mature: 49438
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCHHHHHHH PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLV CCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEE VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL EEEEECHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH GKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIAKRAADKEKNKEKAKVKVRHR HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHEEEECC DAKNVGKRRQPKAKPESNGAK CHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TVTNFSELELDERLINALRDKGYERPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCHHHHHHH PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW HHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RNQTLLFSATLEGDAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVVHKTALLV CCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLLKQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEE VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL EEEEECHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH GKVGRYLNEPLKARVIEELRPSTKVPSEKSNGKPSKKVIAKRAADKEKNKEKAKVKVRHR HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHEEEECC DAKNVGKRRQPKAKPESNGAK CHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2461520; 9278503 [H]