| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371867
Identifier: 157371867
GI number: 157371867
Start: 4016451
End: 4017119
Strand: Reverse
Name: 157371867
Synonym: Spro_3632
Alternate gene names: NA
Gene position: 4017119-4016451 (Counterclockwise)
Preceding gene: 157371869
Following gene: 157371866
Centisome position: 73.72
GC content: 49.48
Gene sequence:
>669_bases ATGTTACTTTATAACAATAATGAGTATCTTTTGATGATGAAGTTACGCTTTGTTTTGGCCGGTTTTTTAATGCTATTGAG CGCCGGCGCTGTGGCTCACCCGCACAGCTTTATTGATATGAACACCACCTTTGTGGCGAAGGATCAACAGCTGGTTGGCT TGAAAATGGTTTGGGTTATGGATGAAATCACCTCGGCAGATCTGCTGTACGATGCACAAAATGCCAAAAAAGACTCGGAA ATATGGAAAAAGCTGGCGGCGGAAGTGATGGCCAATGTTCTGGGGCAACACTATTTTACGGATGTCTATCGCGACGGCAA GCCGGTGAAATACCTGAATCTGCCAACGGAATACCACCTGTCACGCCAGGGGCACCAGGCGGTACTGGAGTTTGTACTGC CGCTGGCCGAACCGCAGCCACTGGCGGGCAAGCCGTTCGAGATCTCCACCTACGATCCCACCTATTTTGTCGATATGACT TATAAAGATAAAACGGCATTGCATCTGCCGCCGGAGATGGCTTCGCAGTGCAAATTCAAACTGATGACGCCCAAACCGGA TTCCTCTTTACAGGCTTACGCATTGTCCCTCGATAAAAACGATTCACCCGGCGAAGATATGGCGCTGGGGCAACAGTTCG CCCAGCGGGTTAGCCTGCAATGTCAATAA
Upstream 100 bases:
>100_bases AAAAGGTGATGCGCGGCGCGGCAACGGCACCCGGTTTTACTTCGGCTTACAACTTTCGTCACAAATATTGGGCGGGATCG CGGCGGTTGAAGAACGGTTT
Downstream 100 bases:
>100_bases ATCTCAGCCAGCACCGGGCGCGTAAGCGACACTGGGCTTTCAGCCTGTGGCCGCTGCTGCTGTTTGCCGTGTTGCTGATG CTGGGCGCGCAGTTGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLLYNNNEYLLMMKLRFVLAGFLMLLSAGAVAHPHSFIDMNTTFVAKDQQLVGLKMVWVMDEITSADLLYDAQNAKKDSE IWKKLAAEVMANVLGQHYFTDVYRDGKPVKYLNLPTEYHLSRQGHQAVLEFVLPLAEPQPLAGKPFEISTYDPTYFVDMT YKDKTALHLPPEMASQCKFKLMTPKPDSSLQAYALSLDKNDSPGEDMALGQQFAQRVSLQCQ
Sequences:
>Translated_222_residues MLLYNNNEYLLMMKLRFVLAGFLMLLSAGAVAHPHSFIDMNTTFVAKDQQLVGLKMVWVMDEITSADLLYDAQNAKKDSE IWKKLAAEVMANVLGQHYFTDVYRDGKPVKYLNLPTEYHLSRQGHQAVLEFVLPLAEPQPLAGKPFEISTYDPTYFVDMT YKDKTALHLPPEMASQCKFKLMTPKPDSSLQAYALSLDKNDSPGEDMALGQQFAQRVSLQCQ >Mature_222_residues MLLYNNNEYLLMMKLRFVLAGFLMLLSAGAVAHPHSFIDMNTTFVAKDQQLVGLKMVWVMDEITSADLLYDAQNAKKDSE IWKKLAAEVMANVLGQHYFTDVYRDGKPVKYLNLPTEYHLSRQGHQAVLEFVLPLAEPQPLAGKPFEISTYDPTYFVDMT YKDKTALHLPPEMASQCKFKLMTPKPDSSLQAYALSLDKNDSPGEDMALGQQFAQRVSLQCQ
Specific function: Unknown
COG id: COG3683
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010412 - InterPro: IPR016537 [H]
Pfam domain/function: PF06226 DUF1007 [H]
EC number: NA
Molecular weight: Translated: 25149; Mature: 25149
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYNNNEYLLMMKLRFVLAGFLMLLSAGAVAHPHSFIDMNTTFVAKDQQLVGLKMVWVM CEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCHHHCEEEEEEH DEITSADLLYDAQNAKKDSEIWKKLAAEVMANVLGQHYFTDVYRDGKPVKYLNLPTEYHL HHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH SRQGHQAVLEFVLPLAEPQPLAGKPFEISTYDPTYFVDMTYKDKTALHLPPEMASQCKFK CCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEECCHHHHHHCEEE LMTPKPDSSLQAYALSLDKNDSPGEDMALGQQFAQRVSLQCQ EECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLYNNNEYLLMMKLRFVLAGFLMLLSAGAVAHPHSFIDMNTTFVAKDQQLVGLKMVWVM CEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCHHHCEEEEEEH DEITSADLLYDAQNAKKDSEIWKKLAAEVMANVLGQHYFTDVYRDGKPVKYLNLPTEYHL HHHCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH SRQGHQAVLEFVLPLAEPQPLAGKPFEISTYDPTYFVDMTYKDKTALHLPPEMASQCKFK CCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEECCHHHHHHCEEE LMTPKPDSSLQAYALSLDKNDSPGEDMALGQQFAQRVSLQCQ EECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]