Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 157371869

GI number: 157371869

Start: 4018526

End: 4019677

Strand: Reverse

Name: hcaT [H]

Synonym: Spro_3634

Alternate gene names: 157371869

Gene position: 4019677-4018526 (Counterclockwise)

Preceding gene: 157371870

Following gene: 157371867

Centisome position: 73.77

GC content: 57.29

Gene sequence:

>1152_bases
ATGGTTCTGCAATCTACGCGTTGGCTAGCTCTCAGTTACTTCACCTACTTTTTTTCTTACGGCATCTTCTTACCCTTTTG
GGGCGTTTGGTTAAAAGGTGAGGGCATACCGCCTGAAACCATCGGTATTCTGCTTGGCGCCGGTCTGGTTGCGCGCTTCC
TCGGTAGTTTGTTGATTGCCCCCCGGGTAAAAGATCCCGCCCATCTGGTGACGGCATTACGCCTGCTGGCATTGCTGACG
CTGGCTTTTGCCATTGGGTTCTGTTTCGGCAACGGCTGGGGCTGGCTGATGCTGGTGATCGCCGGCTTTAACCTGTTCTT
TTCACCGTTGGTTCCGCTCACCGACGCGCTGGCCGGCACCTGGCAAAAGCAAATCACCATGGATTACGGCCGGGTCAGGC
TATGGGGCTCGCTGGCGTTTGTGATTGGTTCGGCGCTAACCGGGCAGATGGTTTCCGTCTGGGGCCATAGCGCCATTCTC
TACAGCCTGATAATCAGCATACTGGCGATGCTGTTGGGCATGATGTTGAAACCGAGCGTGATGCCGCAGGGGGAAGCGCG
CACTCACAGCGAAACCGAACGTTCTCTGTGGGAGATGCTTAAGGAAGGGCCCGTCTGGCGCTTCCTGTTGTGTGTCACTC
TGCTGCAGGGCGCGCATGCCGGTTATTACAGTTTTGGTTCTATCTATTGGCAGGAGGCAGGTTACTCGGCTTCGACCATT
GGTTACTTGTGGTCGCTGGGGGTGGTGGCCGAAGTGGTTATTTTTGCCAGCAGCAATTTCCTGTTCCGCCGCTGGAATGC
ACGTAATCTGCTGCTGCTTTCCGCCTGTTGCGGGATACTGCGCTGGAGCCTGATGGCCAGTAGCACCGAGTTGGGGTGGC
TACTGGTGATCCAAATTCTGCACTGCGGCACCTTTACCGTTTGCCACCTGGCAGCGATGCGTTTTATCGCCGCGCGCAAG
GGACCGGAAGTGATCCGGCTGCAGGCGGTTTATTCGGCGCTGGCGATGGGCGGCGGTATTGCGATTATGACGGTGATCGC
CGGTTTCCTGTTCGAACATCTGCAGGGTGGGGTGTTCTGGGTGATGGCGGCAGTGGTGTTGCCGGCGTTGTTTATCCGCC
CACCGGCCGTTGCGGTCAGCAGCAGCCGTTAA

Upstream 100 bases:

>100_bases
TAAACTGTGAACTCACTAGCACTCTACTCCCTCGACTGTGAATGAACATTGCTAGCCAGTGTGAGCTCTGTCAAAGTATC
GCCCTCACACCGGAGGGATC

Downstream 100 bases:

>100_bases
GAGGTTTCCAGCAGCGCACGGATGAATTTGCGCTGCTGGCGCGCTAATGGCAATTCGGTATAAATCAGCGGCGGCTGTGG
CGCACTGTGCTCCGTGGCAT

Product: putative 3-phenylpropionic acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MVLQSTRWLALSYFTYFFSYGIFLPFWGVWLKGEGIPPETIGILLGAGLVARFLGSLLIAPRVKDPAHLVTALRLLALLT
LAFAIGFCFGNGWGWLMLVIAGFNLFFSPLVPLTDALAGTWQKQITMDYGRVRLWGSLAFVIGSALTGQMVSVWGHSAIL
YSLIISILAMLLGMMLKPSVMPQGEARTHSETERSLWEMLKEGPVWRFLLCVTLLQGAHAGYYSFGSIYWQEAGYSASTI
GYLWSLGVVAEVVIFASSNFLFRRWNARNLLLLSACCGILRWSLMASSTELGWLLVIQILHCGTFTVCHLAAMRFIAARK
GPEVIRLQAVYSALAMGGGIAIMTVIAGFLFEHLQGGVFWVMAAVVLPALFIRPPAVAVSSSR

Sequences:

>Translated_383_residues
MVLQSTRWLALSYFTYFFSYGIFLPFWGVWLKGEGIPPETIGILLGAGLVARFLGSLLIAPRVKDPAHLVTALRLLALLT
LAFAIGFCFGNGWGWLMLVIAGFNLFFSPLVPLTDALAGTWQKQITMDYGRVRLWGSLAFVIGSALTGQMVSVWGHSAIL
YSLIISILAMLLGMMLKPSVMPQGEARTHSETERSLWEMLKEGPVWRFLLCVTLLQGAHAGYYSFGSIYWQEAGYSASTI
GYLWSLGVVAEVVIFASSNFLFRRWNARNLLLLSACCGILRWSLMASSTELGWLLVIQILHCGTFTVCHLAAMRFIAARK
GPEVIRLQAVYSALAMGGGIAIMTVIAGFLFEHLQGGVFWVMAAVVLPALFIRPPAVAVSSSR
>Mature_383_residues
MVLQSTRWLALSYFTYFFSYGIFLPFWGVWLKGEGIPPETIGILLGAGLVARFLGSLLIAPRVKDPAHLVTALRLLALLT
LAFAIGFCFGNGWGWLMLVIAGFNLFFSPLVPLTDALAGTWQKQITMDYGRVRLWGSLAFVIGSALTGQMVSVWGHSAIL
YSLIISILAMLLGMMLKPSVMPQGEARTHSETERSLWEMLKEGPVWRFLLCVTLLQGAHAGYYSFGSIYWQEAGYSASTI
GYLWSLGVVAEVVIFASSNFLFRRWNARNLLLLSACCGILRWSLMASSTELGWLLVIQILHCGTFTVCHLAAMRFIAARK
GPEVIRLQAVYSALAMGGGIAIMTVIAGFLFEHLQGGVFWVMAAVVLPALFIRPPAVAVSSSR

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=377, Percent_Identity=69.4960212201592, Blast_Score=507, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022814
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF01306 LacY_symp [H]

EC number: NA

Molecular weight: Translated: 42063; Mature: 42063

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVLQSTRWLALSYFTYFFSYGIFLPFWGVWLKGEGIPPETIGILLGAGLVARFLGSLLIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
PRVKDPAHLVTALRLLALLTLAFAIGFCFGNGWGWLMLVIAGFNLFFSPLVPLTDALAGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQKQITMDYGRVRLWGSLAFVIGSALTGQMVSVWGHSAILYSLIISILAMLLGMMLKPSV
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPQGEARTHSETERSLWEMLKEGPVWRFLLCVTLLQGAHAGYYSFGSIYWQEAGYSASTI
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH
GYLWSLGVVAEVVIFASSNFLFRRWNARNLLLLSACCGILRWSLMASSTELGWLLVIQIL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HCGTFTVCHLAAMRFIAARKGPEVIRLQAVYSALAMGGGIAIMTVIAGFLFEHLQGGVFW
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
VMAAVVLPALFIRPPAVAVSSSR
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9603882; 9205837; 9278503 [H]