| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371866
Identifier: 157371866
GI number: 157371866
Start: 4015438
End: 4016460
Strand: Reverse
Name: 157371866
Synonym: Spro_3631
Alternate gene names: NA
Gene position: 4016460-4015438 (Counterclockwise)
Preceding gene: 157371867
Following gene: 157371864
Centisome position: 73.71
GC content: 60.12
Gene sequence:
>1023_bases ATGTCAATAAATCTCAGCCAGCACCGGGCGCGTAAGCGACACTGGGCTTTCAGCCTGTGGCCGCTGCTGCTGTTTGCCGT GTTGCTGATGCTGGGCGCGCAGTTGGCGTGGCACTATTGGCCGCAATTACTGATGCAAAGCGTGGTGTGGCAGAAAGGGC TGCACCTGCAATTGGCGGGTCTGTTGCAGCAGGTAAAAGCGGCACCGCAACAGGCCGGGTTGGCGCTGATGTTGTTCAGC CTGAGTTATGGTGTGCTGCACGCCCTTGGCCCCGGCCACGGTAAAGTGGTGATTGCCACCTATCTGGCTACCCATCCGGC GCGGTTGAAAAGCAGCCTGAAACTGACCTTTGCCGCATCGTTGGTGCAGGGACTGGTGGCGATCGCGCTGGTGACGTTGA TGCTGGTGGTACTGCAACTGTCGTCCCGGCAACTGCACCAGAGCAGTTTCTGGCTCGAGAAAGGCAGTTTTATTCTGGTG ATGCTGCTCGGGGTGTTGCTGAGCTGGCGAGCGCTGAAGCGTTTGTATTATGCGGTGAAAGCCATGCGTCCGTCGCCAGC GCTGCGAATCAACAGCCTGCAACCGCTGCCGGCGGATCACGTTCACAGCGAGCATTGCGGCTGCGGTCACCGCCATATGC CGAGCGACAGCGAACTGCAGGCGGGTAGCGACTGGCGTACACAGACCGCCATCGTGTTGGCGATGGGAATGCGGCCGTGC TCGGGCGCAATACTGGTGTTGCTGTTTTCCAAGGTGATTGGCGTGTTTGTCTGGGGCGTTTTCTCGGCGTTGGCCATGGC GCTGGGCACCTCACTGACCATCTCATTATTGGCCTTGTTGGTGCATTACAGTCGCCGATTGGCGGTACGTTTCAGCCAAT CGCGTGCACCTGCGGCCTGGAGTGCGGTGGCCTGGGGTTCGCTGGCGCTGGCCGGTGGCCTGATTTTGCTGTTCGCCGGG CTGTTGCTGTATCTCACTGCCCAGTCGGAGTTTATCGGCGGCATCCGGCCTTTCTCCCGCTGA
Upstream 100 bases:
>100_bases ATTCCTCTTTACAGGCTTACGCATTGTCCCTCGATAAAAACGATTCACCCGGCGAAGATATGGCGCTGGGGCAACAGTTC GCCCAGCGGGTTAGCCTGCA
Downstream 100 bases:
>100_bases CAGGTATAAAAAAAGCGCTGCAATAAATTGCAGCGCTTTTTCTTTATTCATTCACTTCGCGATATTAACGCTTCAGCGCT TCGCTCAGTTCTTCACGCAT
Product: high-affinity nickel-transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSINLSQHRARKRHWAFSLWPLLLFAVLLMLGAQLAWHYWPQLLMQSVVWQKGLHLQLAGLLQQVKAAPQQAGLALMLFS LSYGVLHALGPGHGKVVIATYLATHPARLKSSLKLTFAASLVQGLVAIALVTLMLVVLQLSSRQLHQSSFWLEKGSFILV MLLGVLLSWRALKRLYYAVKAMRPSPALRINSLQPLPADHVHSEHCGCGHRHMPSDSELQAGSDWRTQTAIVLAMGMRPC SGAILVLLFSKVIGVFVWGVFSALAMALGTSLTISLLALLVHYSRRLAVRFSQSRAPAAWSAVAWGSLALAGGLILLFAG LLLYLTAQSEFIGGIRPFSR
Sequences:
>Translated_340_residues MSINLSQHRARKRHWAFSLWPLLLFAVLLMLGAQLAWHYWPQLLMQSVVWQKGLHLQLAGLLQQVKAAPQQAGLALMLFS LSYGVLHALGPGHGKVVIATYLATHPARLKSSLKLTFAASLVQGLVAIALVTLMLVVLQLSSRQLHQSSFWLEKGSFILV MLLGVLLSWRALKRLYYAVKAMRPSPALRINSLQPLPADHVHSEHCGCGHRHMPSDSELQAGSDWRTQTAIVLAMGMRPC SGAILVLLFSKVIGVFVWGVFSALAMALGTSLTISLLALLVHYSRRLAVRFSQSRAPAAWSAVAWGSLALAGGLILLFAG LLLYLTAQSEFIGGIRPFSR >Mature_339_residues SINLSQHRARKRHWAFSLWPLLLFAVLLMLGAQLAWHYWPQLLMQSVVWQKGLHLQLAGLLQQVKAAPQQAGLALMLFSL SYGVLHALGPGHGKVVIATYLATHPARLKSSLKLTFAASLVQGLVAIALVTLMLVVLQLSSRQLHQSSFWLEKGSFILVM LLGVLLSWRALKRLYYAVKAMRPSPALRINSLQPLPADHVHSEHCGCGHRHMPSDSELQAGSDWRTQTAIVLAMGMRPCS GAILVLLFSKVIGVFVWGVFSALAMALGTSLTISLLALLVHYSRRLAVRFSQSRAPAAWSAVAWGSLALAGGLILLFAGL LLYLTAQSEFIGGIRPFSR
Specific function: Efflux system for nickel and cobalt (Potential) [H]
COG id: COG2215
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011541 [H]
Pfam domain/function: PF03824 NicO [H]
EC number: NA
Molecular weight: Translated: 37217; Mature: 37086
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLSQHRARKRHWAFSLWPLLLFAVLLMLGAQLAWHYWPQLLMQSVVWQKGLHLQLAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLQQVKAAPQQAGLALMLFSLSYGVLHALGPGHGKVVIATYLATHPARLKSSLKLTFAAS HHHHHHHCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHH LVQGLVAIALVTLMLVVLQLSSRQLHQSSFWLEKGSFILVMLLGVLLSWRALKRLYYAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMRPSPALRINSLQPLPADHVHSEHCGCGHRHMPSDSELQAGSDWRTQTAIVLAMGMRPC HCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC SGAILVLLFSKVIGVFVWGVFSALAMALGTSLTISLLALLVHYSRRLAVRFSQSRAPAAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SAVAWGSLALAGGLILLFAGLLLYLTAQSEFIGGIRPFSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SINLSQHRARKRHWAFSLWPLLLFAVLLMLGAQLAWHYWPQLLMQSVVWQKGLHLQLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLQQVKAAPQQAGLALMLFSLSYGVLHALGPGHGKVVIATYLATHPARLKSSLKLTFAAS HHHHHHHCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHH LVQGLVAIALVTLMLVVLQLSSRQLHQSSFWLEKGSFILVMLLGVLLSWRALKRLYYAVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMRPSPALRINSLQPLPADHVHSEHCGCGHRHMPSDSELQAGSDWRTQTAIVLAMGMRPC HCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC SGAILVLLFSKVIGVFVWGVFSALAMALGTSLTISLLALLVHYSRRLAVRFSQSRAPAAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SAVAWGSLALAGGLILLFAGLLLYLTAQSEFIGGIRPFSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]