| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yicI [C]
Identifier: 157371833
GI number: 157371833
Start: 3975647
End: 3978019
Strand: Reverse
Name: yicI [C]
Synonym: Spro_3598
Alternate gene names: 157371833
Gene position: 3978019-3975647 (Counterclockwise)
Preceding gene: 157371834
Following gene: 157371831
Centisome position: 73.01
GC content: 59.54
Gene sequence:
>2373_bases ATGCCTATGAAAACCTTAAAAAATTGGACGTTGGCCGGTCAGTATGCCGATCGCATTGAGCTGTTGGTCGATGAACGTCA CCTGTTCTGCCTGTACGTGCTGGAAAACAGCCTGTTCCGCGTGTTGATTAAACGCAATGGCGAGTTGGCGCTGGATCGCA CCTGGAGCATTGCGCCGCAGACTGATGTGCCCTGGGAAGGGCGTGATCGTTTGAGCGTGGCCGGCTTCGGCCTGCCGGGT TATCAGTTGCAGCAACATGAGGATCGGCTGGTGGTGACGACGTCTGCACTGCGCGTTACCGTGCATCAGCCGCTGTGGCT GGAGTGGGAGCACTGCAACGCCGCCGGTGAATGGCGTCCGCTGGCCGCCGATCGGCCAACCAGCGCTTACCTGCTGAACC CGCACGGTGACGGCGTGGCCCACTACCAGCGCCGTCAGGCCGCCGAGCGGTACTATGGCCTGGGTGAGAAGGCCGGTGAT TTGGAGCGTAGCGGTCGCCGCTTTGAAATGCGCAACCTGGACGCGATGGGTTACAACGCCGCCAGCACCGATCCGCTGTA CAAGCACATTCCTTTCACCATCACCCGTGGGGAAGAGGCCAGTTTCGGGCTGTTTTACGACAACCTGAGCAGTTGCTGGC TGGATCTGGGCAATGAGATCGATAACTACCATCTGGCCTATCGCCGCTATCAGGCCGAAGCGGGGGATCTGGATTATTAC CTGTTCCTCGGCCCCAAAGTGCTGGACGTGACCAAGGCGTTTGTACGCCTGACCGGCAAGACTCACTTCGGCCCGAAATG GAGCCTGGGCTACAGCGGTTCCACCATGCATTACACCGATGCGCCGGACGCCCAGCAGCAGCTACAGCAGTTTATTCAGC TCTGTCGCCAGCATGATATTCCCTGCGACTCGTTCCAACTGTCGTCGGGTTATACCTCGATCGGCAACAAGCGCTATGTA TTCAACTGGAACTACGACAAGGTGCCGCAGCCCAAACAGCTGAGCCAGGCATTTCACGACGCCGGGTTAAAGCTGGCGGC CAACATCAAGCCGTGCCTGTTGCATGATCATCCGCAGTATCAGCAGGCGGCGGAGCAGGGGTTGTTTATCCGGGATTCCG AAAGTGACCGGCCGGAGCGCTCCAGCTTTTGGGACGACGAAGGCTCGCACCTCGACTTCACCAATCCGGCGGCGGTGCAA TGGTGGCAACAGGGCGTGACGCAGCAGCTGCTGGAGATGGGCATTGATTCCACCTGGAATGACAATAACGAATACGAAGT GTGGGACGGAGAGGCGCGTTGCCACGGTTTTGGCACGCCTATCGCCATCAAGCATATCCGCCCGGTGATGCCGTTACTGA TGATGCGCGCTTCAATGGAGGCTCAGCAACGCTTTGCTCCCGAGCTGCGGCCTTACCTGATCTCGCGTTCCGGTTGCGCC GGTATGCAGCGTTATGTGCAGACCTGGAGCGGCGACAACCGCACCAACTGGCAGACTTTGCGTTACAACATCCGTATGGG GTTGGGCATGAGCCTGTCTGGCCTGTATAACCTGGGGCACGACGTCGGCGGTTTCTCCGGTGACAAGCCGGACGCCGAGC TTCTGGTGCGCTGGGTGCAAAACGGCGTGATGCATCCGCGTTTTACCATTCACTCCTGGAACGACGACGCCACGGTGAAT GAACCCTGGATGTATCCGGCCGCTACCCCGGCGGTACGCGAGGCGATTAACCTGCGTTACCGGCTGATGCCGTATTTCTA CACCCTGCTGTGGCAGGCCAGTGCCGACGACGAGCCGATGCTGCGCCCGACTTTCCTCGACCATGAGCATGACGAGCAGA CCCTGAAAGAAACCGATGATTTTATGATTGGTCGCGATCTGCTGGTGGCCAGCGTAGTGGAGCAGGGGCAACGCCAGCGG CCGGTGTATCTGCCGGATAACGGCGATGGTTGGTATTGCTTCTACAGCGGCCAGTGGTTCAGTGGCGGCCAGACGGTGAT GCTGGAAGCCCCGCTGGAGCGCTTGCCGCTGCTGGTGCGTGCCGGTGCGGCATTGCCGTTGTCATCCCGCCTGGCGCATG TTGACGTAACGGCGGACGATCGACGTGAGCTTAAGTTGTACCCGCTAAAAGGCTGTGGCAGCGCTTCTGGGCTGTTATTT GAAGACGACGGCGAGAGTTATGGCTGGCAGCAGGGCGACGCGCTGTGGCTGCGCTGGGAGATGCTCAGTGACAATCAGCG CATCACGCTGAACCTCACCACTGAGGGTCGCTTTAAACCGGCATGGCGAACCATCACCTTCAGCTTGCCTGCCGGAGAAG CGCGCGAGTTGTGGATCAACGGCGCGCCCGGCAACAGTTTTACGCTGGAATAA
Upstream 100 bases:
>100_bases TGTTTATCGCCATGGGCTTCTTCGACCTGATCGGCGCCGTATTCCTGATTGCCTTGATCGCCGAACGTGGCGGTAAAAAA ACACTTAATAGTTAAGTTGG
Downstream 100 bases:
>100_bases GCGGAATTATTCAGCCGCGCGCTTTTTGCGCGGTTTTTTGGCCAGGGTGATGGTTTTCACCTCGCTTTCCACCCAGCCAT CCTGCAGACGGGTTTTCAGC
Product: alpha-glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MPMKTLKNWTLAGQYADRIELLVDERHLFCLYVLENSLFRVLIKRNGELALDRTWSIAPQTDVPWEGRDRLSVAGFGLPG YQLQQHEDRLVVTTSALRVTVHQPLWLEWEHCNAAGEWRPLAADRPTSAYLLNPHGDGVAHYQRRQAAERYYGLGEKAGD LERSGRRFEMRNLDAMGYNAASTDPLYKHIPFTITRGEEASFGLFYDNLSSCWLDLGNEIDNYHLAYRRYQAEAGDLDYY LFLGPKVLDVTKAFVRLTGKTHFGPKWSLGYSGSTMHYTDAPDAQQQLQQFIQLCRQHDIPCDSFQLSSGYTSIGNKRYV FNWNYDKVPQPKQLSQAFHDAGLKLAANIKPCLLHDHPQYQQAAEQGLFIRDSESDRPERSSFWDDEGSHLDFTNPAAVQ WWQQGVTQQLLEMGIDSTWNDNNEYEVWDGEARCHGFGTPIAIKHIRPVMPLLMMRASMEAQQRFAPELRPYLISRSGCA GMQRYVQTWSGDNRTNWQTLRYNIRMGLGMSLSGLYNLGHDVGGFSGDKPDAELLVRWVQNGVMHPRFTIHSWNDDATVN EPWMYPAATPAVREAINLRYRLMPYFYTLLWQASADDEPMLRPTFLDHEHDEQTLKETDDFMIGRDLLVASVVEQGQRQR PVYLPDNGDGWYCFYSGQWFSGGQTVMLEAPLERLPLLVRAGAALPLSSRLAHVDVTADDRRELKLYPLKGCGSASGLLF EDDGESYGWQQGDALWLRWEMLSDNQRITLNLTTEGRFKPAWRTITFSLPAGEARELWINGAPGNSFTLE
Sequences:
>Translated_790_residues MPMKTLKNWTLAGQYADRIELLVDERHLFCLYVLENSLFRVLIKRNGELALDRTWSIAPQTDVPWEGRDRLSVAGFGLPG YQLQQHEDRLVVTTSALRVTVHQPLWLEWEHCNAAGEWRPLAADRPTSAYLLNPHGDGVAHYQRRQAAERYYGLGEKAGD LERSGRRFEMRNLDAMGYNAASTDPLYKHIPFTITRGEEASFGLFYDNLSSCWLDLGNEIDNYHLAYRRYQAEAGDLDYY LFLGPKVLDVTKAFVRLTGKTHFGPKWSLGYSGSTMHYTDAPDAQQQLQQFIQLCRQHDIPCDSFQLSSGYTSIGNKRYV FNWNYDKVPQPKQLSQAFHDAGLKLAANIKPCLLHDHPQYQQAAEQGLFIRDSESDRPERSSFWDDEGSHLDFTNPAAVQ WWQQGVTQQLLEMGIDSTWNDNNEYEVWDGEARCHGFGTPIAIKHIRPVMPLLMMRASMEAQQRFAPELRPYLISRSGCA GMQRYVQTWSGDNRTNWQTLRYNIRMGLGMSLSGLYNLGHDVGGFSGDKPDAELLVRWVQNGVMHPRFTIHSWNDDATVN EPWMYPAATPAVREAINLRYRLMPYFYTLLWQASADDEPMLRPTFLDHEHDEQTLKETDDFMIGRDLLVASVVEQGQRQR PVYLPDNGDGWYCFYSGQWFSGGQTVMLEAPLERLPLLVRAGAALPLSSRLAHVDVTADDRRELKLYPLKGCGSASGLLF EDDGESYGWQQGDALWLRWEMLSDNQRITLNLTTEGRFKPAWRTITFSLPAGEARELWINGAPGNSFTLE >Mature_789_residues PMKTLKNWTLAGQYADRIELLVDERHLFCLYVLENSLFRVLIKRNGELALDRTWSIAPQTDVPWEGRDRLSVAGFGLPGY QLQQHEDRLVVTTSALRVTVHQPLWLEWEHCNAAGEWRPLAADRPTSAYLLNPHGDGVAHYQRRQAAERYYGLGEKAGDL ERSGRRFEMRNLDAMGYNAASTDPLYKHIPFTITRGEEASFGLFYDNLSSCWLDLGNEIDNYHLAYRRYQAEAGDLDYYL FLGPKVLDVTKAFVRLTGKTHFGPKWSLGYSGSTMHYTDAPDAQQQLQQFIQLCRQHDIPCDSFQLSSGYTSIGNKRYVF NWNYDKVPQPKQLSQAFHDAGLKLAANIKPCLLHDHPQYQQAAEQGLFIRDSESDRPERSSFWDDEGSHLDFTNPAAVQW WQQGVTQQLLEMGIDSTWNDNNEYEVWDGEARCHGFGTPIAIKHIRPVMPLLMMRASMEAQQRFAPELRPYLISRSGCAG MQRYVQTWSGDNRTNWQTLRYNIRMGLGMSLSGLYNLGHDVGGFSGDKPDAELLVRWVQNGVMHPRFTIHSWNDDATVNE PWMYPAATPAVREAINLRYRLMPYFYTLLWQASADDEPMLRPTFLDHEHDEQTLKETDDFMIGRDLLVASVVEQGQRQRP VYLPDNGDGWYCFYSGQWFSGGQTVMLEAPLERLPLLVRAGAALPLSSRLAHVDVTADDRRELKLYPLKGCGSASGLLFE DDGESYGWQQGDALWLRWEMLSDNQRITLNLTTEGRFKPAWRTITFSLPAGEARELWINGAPGNSFTLE
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI38202257, Length=677, Percent_Identity=29.2466765140325, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI88900491, Length=677, Percent_Identity=29.2466765140325, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI66346737, Length=598, Percent_Identity=29.4314381270903, Blast_Score=249, Evalue=8e-66, Organism=Homo sapiens, GI119393895, Length=616, Percent_Identity=26.6233766233766, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI119393893, Length=616, Percent_Identity=26.6233766233766, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI119393891, Length=616, Percent_Identity=26.6233766233766, Blast_Score=164, Evalue=3e-40, Organism=Homo sapiens, GI221316699, Length=564, Percent_Identity=23.936170212766, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI157364974, Length=645, Percent_Identity=24.8062015503876, Blast_Score=150, Evalue=6e-36, Organism=Homo sapiens, GI310115361, Length=271, Percent_Identity=30.2583025830258, Blast_Score=103, Evalue=1e-21, Organism=Escherichia coli, GI2367256, Length=577, Percent_Identity=25.1299826689775, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI2367323, Length=383, Percent_Identity=27.154046997389, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71991189, Length=635, Percent_Identity=30.0787401574803, Blast_Score=267, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17560800, Length=639, Percent_Identity=27.6995305164319, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17560798, Length=639, Percent_Identity=27.6995305164319, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI32563849, Length=277, Percent_Identity=30.6859205776173, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71985706, Length=621, Percent_Identity=23.5104669887279, Blast_Score=117, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6319706, Length=603, Percent_Identity=27.1973466003317, Blast_Score=207, Evalue=6e-54, Organism=Drosophila melanogaster, GI24643749, Length=657, Percent_Identity=26.9406392694064, Blast_Score=222, Evalue=1e-57, Organism=Drosophila melanogaster, GI24643753, Length=657, Percent_Identity=26.9406392694064, Blast_Score=222, Evalue=1e-57, Organism=Drosophila melanogaster, GI24643751, Length=657, Percent_Identity=26.9406392694064, Blast_Score=222, Evalue=1e-57, Organism=Drosophila melanogaster, GI24643746, Length=657, Percent_Identity=26.9406392694064, Blast_Score=222, Evalue=1e-57, Organism=Drosophila melanogaster, GI21357605, Length=657, Percent_Identity=26.9406392694064, Blast_Score=222, Evalue=1e-57, Organism=Drosophila melanogaster, GI24650054, Length=371, Percent_Identity=24.7978436657682, Blast_Score=80, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 90434; Mature: 90302
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00066 HMG_COA_REDUCTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKTLKNWTLAGQYADRIELLVDERHLFCLYVLENSLFRVLIKRNGELALDRTWSIAPQ CCCCCCCCCEEECCHHHHEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEEECEEECCCC TDVPWEGRDRLSVAGFGLPGYQLQQHEDRLVVTTSALRVTVHQPLWLEWEHCNAAGEWRP CCCCCCCCCCEEEEECCCCCCHHHCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCC LAADRPTSAYLLNPHGDGVAHYQRRQAAERYYGLGEKAGDLERSGRRFEMRNLDAMGYNA CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCCC ASTDPLYKHIPFTITRGEEASFGLFYDNLSSCWLDLGNEIDNYHLAYRRYQAEAGDLDYY CCCCCHHHCCCEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEHEEECCCCCCEEE LFLGPKVLDVTKAFVRLTGKTHFGPKWSLGYSGSTMHYTDAPDAQQQLQQFIQLCRQHDI EEECCHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC PCDSFQLSSGYTSIGNKRYVFNWNYDKVPQPKQLSQAFHDAGLKLAANIKPCLLHDHPQY CCCCEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCHH QQAAEQGLFIRDSESDRPERSSFWDDEGSHLDFTNPAAVQWWQQGVTQQLLEMGIDSTWN HHHHHCCCEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC DNNEYEVWDGEARCHGFGTPIAIKHIRPVMPLLMMRASMEAQQRFAPELRPYLISRSGCA CCCCEEEECCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHH GMQRYVQTWSGDNRTNWQTLRYNIRMGLGMSLSGLYNLGHDVGGFSGDKPDAELLVRWVQ HHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH NGVMHPRFTIHSWNDDATVNEPWMYPAATPAVREAINLRYRLMPYFYTLLWQASADDEPM CCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LRPTFLDHEHDEQTLKETDDFMIGRDLLVASVVEQGQRQRPVYLPDNGDGWYCFYSGQWF CCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCEEE SGGQTVMLEAPLERLPLLVRAGAALPLSSRLAHVDVTADDRRELKLYPLKGCGSASGLLF CCCCEEEEECCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEE EDDGESYGWQQGDALWLRWEMLSDNQRITLNLTTEGRFKPAWRTITFSLPAGEARELWIN CCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEE GAPGNSFTLE CCCCCCCCCC >Mature Secondary Structure PMKTLKNWTLAGQYADRIELLVDERHLFCLYVLENSLFRVLIKRNGELALDRTWSIAPQ CCCCCCCCEEECCHHHHEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEEECEEECCCC TDVPWEGRDRLSVAGFGLPGYQLQQHEDRLVVTTSALRVTVHQPLWLEWEHCNAAGEWRP CCCCCCCCCCEEEEECCCCCCHHHCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCC LAADRPTSAYLLNPHGDGVAHYQRRQAAERYYGLGEKAGDLERSGRRFEMRNLDAMGYNA CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCCC ASTDPLYKHIPFTITRGEEASFGLFYDNLSSCWLDLGNEIDNYHLAYRRYQAEAGDLDYY CCCCCHHHCCCEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEHEEECCCCCCEEE LFLGPKVLDVTKAFVRLTGKTHFGPKWSLGYSGSTMHYTDAPDAQQQLQQFIQLCRQHDI EEECCHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC PCDSFQLSSGYTSIGNKRYVFNWNYDKVPQPKQLSQAFHDAGLKLAANIKPCLLHDHPQY CCCCEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCHH QQAAEQGLFIRDSESDRPERSSFWDDEGSHLDFTNPAAVQWWQQGVTQQLLEMGIDSTWN HHHHHCCCEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC DNNEYEVWDGEARCHGFGTPIAIKHIRPVMPLLMMRASMEAQQRFAPELRPYLISRSGCA CCCCEEEECCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHH GMQRYVQTWSGDNRTNWQTLRYNIRMGLGMSLSGLYNLGHDVGGFSGDKPDAELLVRWVQ HHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHH NGVMHPRFTIHSWNDDATVNEPWMYPAATPAVREAINLRYRLMPYFYTLLWQASADDEPM CCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LRPTFLDHEHDEQTLKETDDFMIGRDLLVASVVEQGQRQRPVYLPDNGDGWYCFYSGQWF CCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCEEE SGGQTVMLEAPLERLPLLVRAGAALPLSSRLAHVDVTADDRRELKLYPLKGCGSASGLLF CCCCEEEEECCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEE EDDGESYGWQQGDALWLRWEMLSDNQRITLNLTTEGRFKPAWRTITFSLPAGEARELWIN CCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEE GAPGNSFTLE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]