| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is exuT [H]
Identifier: 157371834
GI number: 157371834
Start: 3978025
End: 3979332
Strand: Reverse
Name: exuT [H]
Synonym: Spro_3599
Alternate gene names: 157371834
Gene position: 3979332-3978025 (Counterclockwise)
Preceding gene: 157371838
Following gene: 157371833
Centisome position: 73.03
GC content: 58.26
Gene sequence:
>1308_bases ATGAGTGTGGAAATTAATCAAAGGGTCGTCGACAGCGGCCGGCGTAAATTTAAATCACTGCGCTGGTGGATGCTGGCGCT GTTTCTGCTGGGTGTCACGGTTAACTACATCACTCGTAACTCGCTGGGCATCCTGGCACCTGAGCTGAAAACCAGCCTGA ACATGACCACCGAGCAGTATTCCTGGGTGGTTGCGTCGTTCCAACTGGCCTATACGGTGTTTCAGCCGATCTGCGGTTGG CTGATCGATGTGATTGGCCTGAAGATGGGGTTCCTGATCTGCGCCAGCATCTGGGCGGTGGTTTGCATGATGCATGCCGG GGCCGGCACCTGGGTGCAGTTGGCGATCCTGCGCTTCTTTATGGGCGGGGCAGAAGCGGCGGCTACGCCGGCCAACGCCA AGGCGATTTCCGACTGGTTCCCGAAGAAGGAACGGCCCATCGCCGCCGGTTGGGCGGGCGTCGGGTTTTCTATTGGCGCC ATGCTGGCACCGCCGATCATCGTTATTGCCCACGTCTCCTTTGGCTGGCAGGGCGCTTTCCTGTTTTCCGGCGCTCTGGC GTTGCTTTGGGTGGTGCTGTGGTGGCGGTTCTACCACTCGCCGCAGCAGCACCCCAATCTGAGCCAGCAGGAGCTGGATC TGATCCGCGAAGACAACGAGCCGGAGTTACCCCGACTGCCTTTCCTCAAGTCGTTGGCCATTCTCTGCCGAAACAAAAAG TTCTACGGCATTGCCATTCCGGCCTTTCTCGCCGAGCCGGCCTGGGCGGTATTCAGTTTCTGGGTGCCGCTGTATTTGGC CACCGAACGTGGCATGGATTTAAAACACATCGCCATGTTTGCCTGGCTGCCGTTTTTGGCGGCGGACATCGGCAGCGTCG CCAGCGGCTATCTCACCACTTTGTACCGTAAATGGTTCGGCTGCAGCCGCGTTAACTCGGTGGTTGCCAGCTCGGTCACC GGCGCATTCATGATGGTCTCGCTGGCGTTCGTCGCGATCACCAAAGATCCCTATGTGGCGATCGCCCTGATCTCGATCGG CGGTTTCGGCCATCAGGTGATCTCCTGCATGCTCAGCGCGCTGGTGGTGGAATCATTCGATAAAAATCAGGTAGCGACGG TCAACGGTATGCGCGGCTCCAGCGCCTGGATCGCCAGCTTCCTGTTCACGCTGCTGATCGGCGCGGTCTCCGATACCGTC GGTTTCAACCCGCTGTTTATCGCCATGGGCTTCTTCGACCTGATCGGCGCCGTATTCCTGATTGCCTTGATCGCCGAACG TGGCGGTAAAAAAACACTTAATAGTTAA
Upstream 100 bases:
>100_bases AGCATAATGCAATTTAACACCACCCATACCTTCGCTAACCAAACGTACCCTACCAAAAAGCGCGCTGTGTCACCGGGCAG CCGTCGTGGAGAGAAGACAG
Downstream 100 bases:
>100_bases GTTGGATGCCTATGAAAACCTTAAAAAATTGGACGTTGGCCGGTCAGTATGCCGATCGCATTGAGCTGTTGGTCGATGAA CGTCACCTGTTCTGCCTGTA
Product: major facilitator transporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSVEINQRVVDSGRRKFKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWVVASFQLAYTVFQPICGW LIDVIGLKMGFLICASIWAVVCMMHAGAGTWVQLAILRFFMGGAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGA MLAPPIIVIAHVSFGWQGAFLFSGALALLWVVLWWRFYHSPQQHPNLSQQELDLIREDNEPELPRLPFLKSLAILCRNKK FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKHIAMFAWLPFLAADIGSVASGYLTTLYRKWFGCSRVNSVVASSVT GAFMMVSLAFVAITKDPYVAIALISIGGFGHQVISCMLSALVVESFDKNQVATVNGMRGSSAWIASFLFTLLIGAVSDTV GFNPLFIAMGFFDLIGAVFLIALIAERGGKKTLNS
Sequences:
>Translated_435_residues MSVEINQRVVDSGRRKFKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWVVASFQLAYTVFQPICGW LIDVIGLKMGFLICASIWAVVCMMHAGAGTWVQLAILRFFMGGAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGA MLAPPIIVIAHVSFGWQGAFLFSGALALLWVVLWWRFYHSPQQHPNLSQQELDLIREDNEPELPRLPFLKSLAILCRNKK FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKHIAMFAWLPFLAADIGSVASGYLTTLYRKWFGCSRVNSVVASSVT GAFMMVSLAFVAITKDPYVAIALISIGGFGHQVISCMLSALVVESFDKNQVATVNGMRGSSAWIASFLFTLLIGAVSDTV GFNPLFIAMGFFDLIGAVFLIALIAERGGKKTLNS >Mature_434_residues SVEINQRVVDSGRRKFKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWVVASFQLAYTVFQPICGWL IDVIGLKMGFLICASIWAVVCMMHAGAGTWVQLAILRFFMGGAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAM LAPPIIVIAHVSFGWQGAFLFSGALALLWVVLWWRFYHSPQQHPNLSQQELDLIREDNEPELPRLPFLKSLAILCRNKKF YGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKHIAMFAWLPFLAADIGSVASGYLTTLYRKWFGCSRVNSVVASSVTG AFMMVSLAFVAITKDPYVAIALISIGGFGHQVISCMLSALVVESFDKNQVATVNGMRGSSAWIASFLFTLLIGAVSDTVG FNPLFIAMGFFDLIGAVFLIALIAERGGKKTLNS
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=361, Percent_Identity=24.0997229916898, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI2367193, Length=415, Percent_Identity=45.3012048192771, Blast_Score=371, Evalue=1e-104, Organism=Escherichia coli, GI87082320, Length=435, Percent_Identity=24.367816091954, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1789152, Length=432, Percent_Identity=23.8425925925926, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789515, Length=417, Percent_Identity=23.5011990407674, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI2367379, Length=418, Percent_Identity=24.8803827751196, Blast_Score=118, Evalue=8e-28, Organism=Caenorhabditis elegans, GI115533554, Length=322, Percent_Identity=23.9130434782609, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=292, Percent_Identity=22.2602739726027, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI28573708, Length=374, Percent_Identity=24.331550802139, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28573707, Length=374, Percent_Identity=24.331550802139, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28573299, Length=297, Percent_Identity=23.5690235690236, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24658666, Length=307, Percent_Identity=23.7785016286645, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24658658, Length=298, Percent_Identity=22.1476510067114, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550460, Length=321, Percent_Identity=23.98753894081, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI20130135, Length=316, Percent_Identity=25.6329113924051, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24655255, Length=280, Percent_Identity=25, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24655271, Length=320, Percent_Identity=26.5625, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24584153, Length=400, Percent_Identity=22.75, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24639764, Length=363, Percent_Identity=22.3140495867769, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550495, Length=444, Percent_Identity=23.6486486486486, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47812; Mature: 47681
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEINQRVVDSGRRKFKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH SWVVASFQLAYTVFQPICGWLIDVIGLKMGFLICASIWAVVCMMHAGAGTWVQLAILRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGGAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAMLAPPIIVIAHVSFGWQGAF HCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHH LFSGALALLWVVLWWRFYHSPQQHPNLSQQELDLIREDNEPELPRLPFLKSLAILCRNKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKHIAMFAWLPFLAADIGSVASGYLTT EEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRKWFGCSRVNSVVASSVTGAFMMVSLAFVAITKDPYVAIALISIGGFGHQVISCMLSA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHHHHHHHH LVVESFDKNQVATVNGMRGSSAWIASFLFTLLIGAVSDTVGFNPLFIAMGFFDLIGAVFL HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IALIAERGGKKTLNS HHHHHHCCCCCCCCC >Mature Secondary Structure SVEINQRVVDSGRRKFKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH SWVVASFQLAYTVFQPICGWLIDVIGLKMGFLICASIWAVVCMMHAGAGTWVQLAILRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGGAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAMLAPPIIVIAHVSFGWQGAF HCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHH LFSGALALLWVVLWWRFYHSPQQHPNLSQQELDLIREDNEPELPRLPFLKSLAILCRNKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKHIAMFAWLPFLAADIGSVASGYLTT EEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRKWFGCSRVNSVVASSVTGAFMMVSLAFVAITKDPYVAIALISIGGFGHQVISCMLSA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHHHHHHHH LVVESFDKNQVATVNGMRGSSAWIASFLFTLLIGAVSDTVGFNPLFIAMGFFDLIGAVFL HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH IALIAERGGKKTLNS HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]